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Miskolczy Z, Megyesi M, Biczók L, Prabodh A, Biedermann F. Kinetics and Mechanism of Cation-Induced Guest Release from Cucurbit[7]uril. Chemistry 2020; 26:7433-7441. [PMID: 31943402 PMCID: PMC7318709 DOI: 10.1002/chem.201905633] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Indexed: 12/11/2022]
Abstract
The release of two organic guests from cucurbit[7]uril (CB7) was selectively monitored by the stopped‐flow method in aqueous solutions of inorganic salts to reveal the mechanistic picture in detail. Two contrasting mechanisms were identified: The symmetric dicationic 2,7‐dimethyldiazapyrenium shows a cation‐independent complex dissociation mechanism coupled to deceleration of the ingression in the presence of alkali and alkaline earth cations (Mn+) due to competitive formation of CB7–Mn+ complexes. A much richer, unprecedented kinetic behaviour was observed for the ingression and egression of the monocationic and non‐symmetric berberine (B+). The formation of ternary complex B+–CB7–Mn+ was unambiguously revealed. A difference of more than two orders of magnitude was found in the equilibrium constants of Mn+ binding to B+–CB7 inclusion complex. Large cations, such as K+ and Ba2+, also promoted B+ expulsion from the ternary complex in a bimolecular process. This study reveals a previously hidden mechanistic picture and motivates systematic kinetic investigations of other host–guest systems.
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Affiliation(s)
- Zsombor Miskolczy
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, P.O. Box 286, 1519, Budapest, Hungary
| | - Mónika Megyesi
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, P.O. Box 286, 1519, Budapest, Hungary
| | - László Biczók
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, P.O. Box 286, 1519, Budapest, Hungary
| | - Amrutha Prabodh
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Frank Biedermann
- Institute of Nanotechnology (INT), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
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52
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Buczkowski A, Gorzkiewicz M, Stepniak A, Malinowska-Michalak M, Tokarz P, Urbaniak P, Ionov M, Klajnert-Maculewicz B, Palecz B. Physicochemical and in vitro cytotoxicity studies of inclusion complex between gemcitabine and cucurbit[7]uril host. Bioorg Chem 2020; 99:103843. [PMID: 32305692 DOI: 10.1016/j.bioorg.2020.103843] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 04/05/2020] [Accepted: 04/08/2020] [Indexed: 12/21/2022]
Abstract
Gemcitabine, a cytostatic drug from the pyrimidine antimetabolite group, exhibits limited storage stability and numerous side effects during therapy. One of the strategies to improve the effectiveness of therapy with such drugs is the use of supramolecular nano-containers, including dendrimers and macrocyclic compounds. The ability of gemcitabine to attach a proton in an aqueous environment necessitates the search for a carrier that is well-tolerated by an organism and capable of supramolecular binding of a ligand (drug) in a cationic form. In the current study a promising strategy was tested for using cucurbituril Q7 to bind gemcitabine cations for its efficient intracellular delivery on three selected cancer cell lines (MOLT4, THP-1 and U937). Based on physicochemical studies (equilibrium dialysis, UV and 1H NMR titrations, DOSY 1H NMR measurements, DSC calorimetry) and cytotoxicity tests on cells with a free and blocked hENT1 transporter, the conclusion was drawn about the binding and penetration of the cucurbituril-drug complex into cancer cells.
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Affiliation(s)
- Adam Buczkowski
- Unit of Biophysical Chemistry, Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, 165 Pomorska St., 90-236 Lodz, Poland.
| | - Michał Gorzkiewicz
- Department of General Biophysics, Faculty of Biology and Environmental Protection, University of Lodz, 141/143 Pomorska St., 90-236 Lodz, Poland
| | - Artur Stepniak
- Unit of Biophysical Chemistry, Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, 165 Pomorska St., 90-236 Lodz, Poland
| | - Małgorzata Malinowska-Michalak
- Unit of Biophysical Chemistry, Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, 165 Pomorska St., 90-236 Lodz, Poland
| | - Paweł Tokarz
- Molecular Spectroscopy Laboratory, Department of Organic Chemistry, Faculty of Chemistry, University of Lodz, Tamka 12, Lodz 91-403, Poland
| | - Paweł Urbaniak
- Department of Inorganic and Analytical Chemistry, Faculty of Chemistry, University of Lodz, 12 Tamka St., 91-403 Lodz, Poland
| | - Maksim Ionov
- Department of General Biophysics, Faculty of Biology and Environmental Protection, University of Lodz, 141/143 Pomorska St., 90-236 Lodz, Poland
| | - Barbara Klajnert-Maculewicz
- Department of General Biophysics, Faculty of Biology and Environmental Protection, University of Lodz, 141/143 Pomorska St., 90-236 Lodz, Poland
| | - Bartlomiej Palecz
- Unit of Biophysical Chemistry, Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, 165 Pomorska St., 90-236 Lodz, Poland
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53
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Prabodh A, Sinn S, Grimm L, Miskolczy Z, Megyesi M, Biczók L, Bräse S, Biedermann F. Teaching indicators to unravel the kinetic features of host–guest inclusion complexes. Chem Commun (Camb) 2020; 56:12327-12330. [DOI: 10.1039/d0cc03715j] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Three new, practically convenient methods are introduced for measuring kinetic parameters of supramolecular host–guest and protein–ligand complexes. Combined with thermodynamic data, this allows for an in-depth of the binding mechanism.
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Affiliation(s)
- Amrutha Prabodh
- Karlsruhe Institute of Technology (KIT)
- Institute of Nanotechnology (INT)
- 76344 Eggenstein-Leopoldshafen
- Germany
| | - Stephan Sinn
- Karlsruhe Institute of Technology (KIT)
- Institute of Nanotechnology (INT)
- 76344 Eggenstein-Leopoldshafen
- Germany
| | - Laura Grimm
- Karlsruhe Institute of Technology (KIT)
- Institute of Nanotechnology (INT)
- 76344 Eggenstein-Leopoldshafen
- Germany
| | - Zsombor Miskolczy
- Institute of Materials and Environmental Chemistry Research Centre for Natural Sciences
- 1117 Budapest
- Hungary
| | - Mónika Megyesi
- Institute of Materials and Environmental Chemistry Research Centre for Natural Sciences
- 1117 Budapest
- Hungary
| | - László Biczók
- Institute of Materials and Environmental Chemistry Research Centre for Natural Sciences
- 1117 Budapest
- Hungary
| | - Stefan Bräse
- Karlsruhe Institute of Technology (KIT)
- Institute of Organic Chemistry (IOC)
- 76131 Karlsruhe
- Germany
- Institute of Biological and Chemical Systems – Functional Molecular Systems (IBCS-FMS)
| | - Frank Biedermann
- Karlsruhe Institute of Technology (KIT)
- Institute of Nanotechnology (INT)
- 76344 Eggenstein-Leopoldshafen
- Germany
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Andrýs R, Klusoňová A, Lísa M, Žd'árová Karasová J. Encapsulation of oxime acetylcholinesterase reactivators: influence of physiological conditions on the stability of oxime-cucurbit[7]uril complexes. NEW J CHEM 2020. [DOI: 10.1039/d0nj03102j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The influence of physiological conditions on the host–guest chemistry of oxime acetylcholinesterase reactivators with cucurbit[7]urile was investigated to increase their effectiveness for the treatment of organophosphate intoxication.
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Affiliation(s)
- Rudolf Andrýs
- Department of Chemistry
- Faculty of Science
- University of Hradec Králové
- 50003 Hradec Králové
- Czech Republic
| | - Aneta Klusoňová
- Department of Chemistry
- Faculty of Science
- University of Hradec Králové
- 50003 Hradec Králové
- Czech Republic
| | - Miroslav Lísa
- Department of Chemistry
- Faculty of Science
- University of Hradec Králové
- 50003 Hradec Králové
- Czech Republic
| | - Jana Žd'árová Karasová
- Department of Toxicology and Military Pharmacy
- Faculty of Military Health Sciences Hradec Králové
- University of Defence
- Praha
- Czech Republic
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Liu Y, Peng S, Angelova L, Nau WM, Hennig A. Label-Free Fluorescent Kinase and Phosphatase Enzyme Assays with Supramolecular Host-Dye Pairs. ChemistryOpen 2019; 8:1350-1354. [PMID: 31741820 PMCID: PMC6848908 DOI: 10.1002/open.201900299] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Indexed: 12/21/2022] Open
Abstract
The combination of the macrocyclic hosts p-sulfonatocalix[4]arene and cucurbit[7]uril with the fluorescent dyes lucigenin and berberine affords two label-free enzyme assays for the detection of kinase and phosphatase activity by fluorescence monitoring. In contrast to established assays, no substrate labeling is required. Since phosphorylation is one of the most important regulatory mechanisms in biological signal transduction, the assays should be useful for identification of inhibitors and activators in high-throughput screening (HTS) format for drug discovery.
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Affiliation(s)
- Yan‐Cen Liu
- Department of Life Sciences and ChemistryJacobs University Bremen gGmbHCampus Ring 128759BremenGermany
| | - Shu Peng
- Department of Life Sciences and ChemistryJacobs University Bremen gGmbHCampus Ring 128759BremenGermany
- College of Chemistry, State Key Laboratory of Elemento-Organic Chemistry, Key Laboratory of Functional Polymer Materials, Ministry of EducationNankai UniversityTianjin300071 TianjinChina
| | - Lora Angelova
- Department of Life Sciences and ChemistryJacobs University Bremen gGmbHCampus Ring 128759BremenGermany
| | - Werner M. Nau
- Department of Life Sciences and ChemistryJacobs University Bremen gGmbHCampus Ring 128759BremenGermany
| | - Andreas Hennig
- Department of Life Sciences and ChemistryJacobs University Bremen gGmbHCampus Ring 128759BremenGermany
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