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For: Falck E, Patra M, Karttunen M, Hyvönen MT, Vattulainen I. Impact of cholesterol on voids in phospholipid membranes. J Chem Phys 2004;121:12676-89. [PMID: 15606294 DOI: 10.1063/1.1824033] [Citation(s) in RCA: 89] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
Number Cited by Other Article(s)
51
Saito H, Shinoda W. Cholesterol Effect on Water Permeability through DPPC and PSM Lipid Bilayers: A Molecular Dynamics Study. J Phys Chem B 2011;115:15241-50. [DOI: 10.1021/jp201611p] [Citation(s) in RCA: 90] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
52
Chong PLG, Sulc M, Winter R. Compressibilities and volume fluctuations of archaeal tetraether liposomes. Biophys J 2010;99:3319-26. [PMID: 21081080 PMCID: PMC2980700 DOI: 10.1016/j.bpj.2010.09.061] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2010] [Revised: 09/29/2010] [Accepted: 09/30/2010] [Indexed: 11/16/2022]  Open
53
Busch S, Unruh T. The influence of additives on the nanoscopic dynamics of the phospholipid dimyristoylphosphatidylcholine. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2010;1808:199-208. [PMID: 21036141 DOI: 10.1016/j.bbamem.2010.10.012] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2010] [Revised: 09/17/2010] [Accepted: 10/19/2010] [Indexed: 11/16/2022]
54
Javanainen M, Monticelli L, Bernardino de la Serna J, Vattulainen I. Free volume theory applied to lateral diffusion in Langmuir monolayers: atomistic simulations for a protein-free model of lung surfactant. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2010;26:15436-44. [PMID: 20809600 DOI: 10.1021/la102454m] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
55
Mannock DA, Lewis RN, McMullen TP, McElhaney RN. The effect of variations in phospholipid and sterol structure on the nature of lipid–sterol interactions in lipid bilayer model membranes. Chem Phys Lipids 2010;163:403-48. [DOI: 10.1016/j.chemphyslip.2010.03.011] [Citation(s) in RCA: 119] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2009] [Revised: 03/13/2010] [Accepted: 03/27/2010] [Indexed: 01/30/2023]
56
Fraňová M, Repáková J, Čapková P, Holopainen JM, Vattulainen I. Effects of DPH on DPPC−Cholesterol Membranes with Varying Concentrations of Cholesterol: From Local Perturbations to Limitations in Fluorescence Anisotropy Experiments. J Phys Chem B 2010;114:2704-11. [DOI: 10.1021/jp908533x] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
57
Temperature-induced structural transition in-situ in porcine lens--changes observed in void size distribution. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2010;1798:958-65. [PMID: 20122897 DOI: 10.1016/j.bbamem.2010.01.011] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2009] [Revised: 01/03/2010] [Accepted: 01/14/2010] [Indexed: 11/23/2022]
58
Almeida JAS, Marques EF, Jurado AS, Pais AACC. The effect of cationic gemini surfactants upon lipid membranes. An experimental and molecular dynamics simulation study. Phys Chem Chem Phys 2010;12:14462-76. [DOI: 10.1039/c0cp00950d] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
59
Martinez-Seara H, Róg T, Karttunen M, Vattulainen I, Reigada R. Why is the sn-2 Chain of Monounsaturated Glycerophospholipids Usually Unsaturated whereas the sn-1 Chain Is Saturated? Studies of 1-Stearoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine (SOPC) and 1-Oleoyl-2-stearoyl-sn-glycero-3-phosphatidylcholine (OSPC) Membranes with and without Cholesterol. J Phys Chem B 2009;113:8347-56. [DOI: 10.1021/jp902131b] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
60
Jedlovszky P, Sega M, Vallauri R. GM1 Ganglioside Embedded in a Hydrated DOPC Membrane: A Molecular Dynamics Simulation Study. J Phys Chem B 2009;113:4876-86. [DOI: 10.1021/jp808199p] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
61
Sane P, Salonen E, Falck E, Repakova J, Tuomisto F, Holopainen JM, Vattulainen I. Probing Biomembranes with Positrons. J Phys Chem B 2009;113:1810-2. [DOI: 10.1021/jp809308j] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
62
Róg T, Vattulainen I, Jansen M, Ikonen E, Karttunen M. Comparison of cholesterol and its direct precursors along the biosynthetic pathway: effects of cholesterol, desmosterol and 7-dehydrocholesterol on saturated and unsaturated lipid bilayers. J Chem Phys 2009;129:154508. [PMID: 19045210 DOI: 10.1063/1.2996296] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
63
Ordering effects of cholesterol and its analogues. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2009;1788:97-121. [DOI: 10.1016/j.bbamem.2008.08.022] [Citation(s) in RCA: 450] [Impact Index Per Article: 30.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2008] [Revised: 08/27/2008] [Accepted: 08/31/2008] [Indexed: 12/12/2022]
64
Liquid ordered and gel phases of lipid bilayers: fluorescent probes reveal close fluidity but different hydration. Biophys J 2008;95:1217-25. [PMID: 18390604 DOI: 10.1529/biophysj.107.127480] [Citation(s) in RCA: 108] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
65
Mezei M, Jedlovszky P. Statistical thermodynamics through computer simulation to characterize phospholipid interactions in membranes. Methods Mol Biol 2007;400:127-44. [PMID: 17951731 DOI: 10.1007/978-1-59745-519-0_9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023]
66
Zhu Q, Cheng KH, Vaughn MW. Molecular dynamics studies of the molecular structure and interactions of cholesterol superlattices and random domains in an unsaturated phosphatidylcholine bilayer membrane. J Phys Chem B 2007;111:11021-31. [PMID: 17718554 DOI: 10.1021/jp070487z] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
67
Róg T, Vattulainen I, Bunker A, Karttunen M. Glycolipid Membranes through Atomistic Simulations:  Effect of Glucose and Galactose Head Groups on Lipid Bilayer Properties. J Phys Chem B 2007;111:10146-54. [PMID: 17676793 DOI: 10.1021/jp0730895] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
68
Curdová J, Capková P, Plásek J, Repáková J, Vattulainen I. Free Pyrene Probes in Gel and Fluid Membranes:  Perspective through Atomistic Simulations. J Phys Chem B 2007;111:3640-50. [PMID: 17388522 DOI: 10.1021/jp065956w] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
69
The structure of the zwitterionic headgroups in a DMPC bilayer as seen from Monte Carlo simulation: Comparisons with ionic solutions. J Mol Liq 2007. [DOI: 10.1016/j.molliq.2006.08.040] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
70
Róg T, Pasenkiewicz-Gierula M, Vattulainen I, Karttunen M. What happens if cholesterol is made smoother: importance of methyl substituents in cholesterol ring structure on phosphatidylcholine-sterol interaction. Biophys J 2007;92:3346-57. [PMID: 17293396 PMCID: PMC1853147 DOI: 10.1529/biophysj.106.095497] [Citation(s) in RCA: 84] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
71
Aittoniemi J, Niemelä PS, Hyvönen MT, Karttunen M, Vattulainen I. Insight into the putative specific interactions between cholesterol, sphingomyelin, and palmitoyl-oleoyl phosphatidylcholine. Biophys J 2006;92:1125-37. [PMID: 17114220 PMCID: PMC1783890 DOI: 10.1529/biophysj.106.088427] [Citation(s) in RCA: 116] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
72
Róg T, Pasenkiewicz-Gierula M. Cholesterol-sphingomyelin interactions: a molecular dynamics simulation study. Biophys J 2006;91:3756-67. [PMID: 16920840 PMCID: PMC1630474 DOI: 10.1529/biophysj.106.080887] [Citation(s) in RCA: 79] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2006] [Accepted: 08/03/2006] [Indexed: 01/22/2023]  Open
73
Wohl CJ, Helms MA, Chung JO, Kuciauskas D. Phospholipid Bilayer Free Volume Analysis Employing the Thermal Ring-Closing Reaction of Merocyanine Molecular Switches. J Phys Chem B 2006;110:22796-803. [PMID: 17092030 DOI: 10.1021/jp065406y] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
74
Molecular dynamics simulation of GM1 gangliosides embedded in a phospholipid membrane. J Mol Liq 2006. [DOI: 10.1016/j.molliq.2006.08.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
75
Falck E, Hautala JT, Karttunen M, Kinnunen PKJ, Patra M, Saaren-Seppälä H, Vattulainen I, Wiedmer SK, Holopainen JM. Interaction of fusidic acid with lipid membranes: Implications to the mechanism of antibiotic activity. Biophys J 2006;91:1787-99. [PMID: 16782792 PMCID: PMC1544291 DOI: 10.1529/biophysj.106.084525] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
76
Róg T, Pasenkiewicz-Gierula M. Cholesterol effects on a mixed-chain phosphatidylcholine bilayer: a molecular dynamics simulation study. Biochimie 2006;88:449-60. [PMID: 16356621 DOI: 10.1016/j.biochi.2005.10.005] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2005] [Accepted: 10/10/2005] [Indexed: 10/25/2022]
77
Ioffe VM, Gorbenko GP, Domanov YA, Tatarets AL, Patsenker LD, Terpetsching EA, Dyubko TS. A New Fluorescent Squaraine Probe for the Measurement of Membrane Polarity. J Fluoresc 2006;16:47-52. [PMID: 16397827 DOI: 10.1007/s10895-005-0018-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2005] [Accepted: 09/27/2005] [Indexed: 10/25/2022]
78
Weis M, Kopáni M, Michalka P, Biró C, Celec P, Danisovic L, Jakubovský J. Conformation study of the membrane models by the Maxwell displacement current technique and oxidative stress. ACTA ACUST UNITED AC 2005;65:81-7. [PMID: 16325259 DOI: 10.1016/j.jbbm.2005.10.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2005] [Revised: 10/23/2005] [Accepted: 10/23/2005] [Indexed: 11/17/2022]
79
Doxastakis M, Sum AK, de Pablo JJ. Modulating Membrane Properties:  The Effect of Trehalose and Cholesterol on a Phospholipid Bilayer. J Phys Chem B 2005;109:24173-81. [PMID: 16375409 DOI: 10.1021/jp054843u] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
80
Liu J, Li Y, Pan D, Hopfinger AJ. Predicting permeability coefficient in ADMET evaluation by using different membranes-interaction QSAR. Int J Pharm 2005;304:115-23. [PMID: 16182478 DOI: 10.1016/j.ijpharm.2005.08.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2005] [Revised: 06/07/2005] [Accepted: 08/01/2005] [Indexed: 11/22/2022]
81
Wohl CJ, Kuciauskas D. Isomerization Dynamics of Photochromic Spiropyran Molecular Switches in Phospholipid Bilayers. J Phys Chem B 2005;109:21893-9. [PMID: 16853844 DOI: 10.1021/jp0538823] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
82
Vainio S, Jansen M, Koivusalo M, Róg T, Karttunen M, Vattulainen I, Ikonen E. Significance of sterol structural specificity. Desmosterol cannot replace cholesterol in lipid rafts. J Biol Chem 2005;281:348-55. [PMID: 16249181 DOI: 10.1074/jbc.m509530200] [Citation(s) in RCA: 113] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
83
Patra M. Lateral pressure profiles in cholesterol-DPPC bilayers. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2005;35:79-88. [PMID: 16205919 DOI: 10.1007/s00249-005-0011-0] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2005] [Revised: 06/22/2005] [Accepted: 07/18/2005] [Indexed: 11/30/2022]
84
Alinchenko MG, Voloshin VP, Medvedev NN, Mezei M, Pártay L, Jedlovszky P. Effect of Cholesterol on the Properties of Phospholipid Membranes. 4. Interatomic Voids. J Phys Chem B 2005;109:16490-502. [PMID: 16853097 DOI: 10.1021/jp051832s] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
85
Falck E, Patra M, Karttunen M, Hyvönen MT, Vattulainen I. Response to comment by Almeida et al.: free area theories for lipid bilayers--predictive or not? Biophys J 2005;89:745-52. [PMID: 15951371 PMCID: PMC1366571 DOI: 10.1529/biophysj.105.065714] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2005] [Accepted: 05/24/2005] [Indexed: 11/18/2022]  Open
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