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51
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Kumar V, Esfarjani K, Kawazoe Y. Ab Initio Computer Simulations on Microclusters: Structures and Electronic Properties. ACTA ACUST UNITED AC 2002. [DOI: 10.1007/978-3-662-04812-2_2] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
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52
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Tangney P, Scandolo S. How well do Car–Parrinello simulations reproduce the Born–Oppenheimer surface? Theory and examples. J Chem Phys 2002. [DOI: 10.1063/1.1423331] [Citation(s) in RCA: 104] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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53
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Tozzini V, Buda F, Fasolino A. Fullerene-like III−V Clusters: A Density Functional Theory Prediction. J Phys Chem B 2001. [DOI: 10.1021/jp0134087] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Valentina Tozzini
- NEST-INFM and Scuola Normale Superiore, Piazza dei Cavalieri, 7 I-56126 Pisa, Italy, Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, P.O. Box 9502, NL-2300RA Leiden, The Netherlands, and Research Institute for Materials, Institute of Theoretical Physics, University of Nijmegen, Toernooiveld, NL-6525ED Nijmegen, The Netherlands
| | - Francesco Buda
- NEST-INFM and Scuola Normale Superiore, Piazza dei Cavalieri, 7 I-56126 Pisa, Italy, Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, P.O. Box 9502, NL-2300RA Leiden, The Netherlands, and Research Institute for Materials, Institute of Theoretical Physics, University of Nijmegen, Toernooiveld, NL-6525ED Nijmegen, The Netherlands
| | - Annalisa Fasolino
- NEST-INFM and Scuola Normale Superiore, Piazza dei Cavalieri, 7 I-56126 Pisa, Italy, Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, Einsteinweg 55, P.O. Box 9502, NL-2300RA Leiden, The Netherlands, and Research Institute for Materials, Institute of Theoretical Physics, University of Nijmegen, Toernooiveld, NL-6525ED Nijmegen, The Netherlands
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54
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Lin X, Ramer NJ, Rappe AM, Hass KC, Schneider WF, Trout BL. Effect of Particle Size on the Adsorption of O and S Atoms on Pt: A Density-Functional Theory Study. J Phys Chem B 2001. [DOI: 10.1021/jp011133p] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xi Lin
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139-4301
| | | | | | | | | | - Bernhardt L. Trout
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139-4301
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55
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Tozzini V, Nifosì R. Ab Initio Molecular Dynamics of the Green Fluorescent Protein (GFP) Chromophore: An Insight into the Photoinduced Dynamics of Green Fluorescent Proteins. J Phys Chem B 2001. [DOI: 10.1021/jp010052q] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Valentina Tozzini
- Scuola Normale Superiore and Istituto Nazionale per la Fisica della Materia, Piazza dei Cavalieri 7, I-56126 Pisa, Italy
| | - Riccardo Nifosì
- Scuola Normale Superiore and Istituto Nazionale per la Fisica della Materia, Piazza dei Cavalieri 7, I-56126 Pisa, Italy
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56
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Sergi A, Grüning M, Ferrario M, Buda F. Density Functional Study of the Photoactive Yellow Protein's Chromophore. J Phys Chem B 2001. [DOI: 10.1021/jp002270+] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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57
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A density functional study of CuO2 molecules: structural stability, bonding and temperature effects. Chem Phys Lett 2000. [DOI: 10.1016/s0009-2614(00)01193-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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58
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Tozzini V, Buda F, Fasolino A. Spontaneous formation and stability of small GaP fullerenes. PHYSICAL REVIEW LETTERS 2000; 85:4554-4557. [PMID: 11082594 DOI: 10.1103/physrevlett.85.4554] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2000] [Revised: 06/28/2000] [Indexed: 05/23/2023]
Abstract
We report the spontaneous formation of a GaP fullerene cage in ab initio molecular dynamics simulations starting from a bulk fragment. A systematic study of the geometric and electronic properties of neutral and ionized GaP clusters suggests the stability of heterofullerenes formed by a compound with zinc blende bulk structure. We find that GaP fullerenes up to 28 atoms have high symmetry, closed electronic shells, large highest occupied molecular orbital-lowest unoccupied molecular orbital energy gaps, and do not dissociate when ionized. We compare our results for GaP with those obtained by other groups for the corresponding BN clusters.
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Affiliation(s)
- V Tozzini
- Istituto Nazionale per la Fisica della Materia and Scuola Normale Superiore, Piazza dei Cavalieri, 7 I-56126 Pisa, Italy
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59
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Uehara K, Tse JS. The Implementation of the Iterative Diagonalization Scheme and ab initioMolecular Dynamics Simulation with the LAPW Method. MOLECULAR SIMULATION 2000. [DOI: 10.1080/08927020008023008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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60
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van Roon FHM, Massobrio C, de Wolff E, de Leeuw SW. Structure of liquid GeSe: A first principle study. J Chem Phys 2000. [DOI: 10.1063/1.1289881] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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61
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Bernasconi L, Fois E, Selloni A. Cation–anion versus cation–framework interactions in sodalites: First-principles study of model Cu-exchanged sodalites. J Chem Phys 1999. [DOI: 10.1063/1.478825] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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62
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Massobrio C, Pasquarello A, Dal Corso A. Structural and electronic properties of small Cun clusters using generalized-gradient approximations within density functional theory. J Chem Phys 1998. [DOI: 10.1063/1.477313] [Citation(s) in RCA: 74] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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63
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Palma A, Pasquarello A, Ciccotti G, Car R. Cu++ and Li+ interaction with polyethylene oxide byab initiomolecular dynamics. J Chem Phys 1998. [DOI: 10.1063/1.476432] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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64
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Musolino V, Selloni A, Car R. First principles study of adsorbed Cun (n=1–4) microclusters on MgO(100): Structural and electronic properties. J Chem Phys 1998. [DOI: 10.1063/1.475911] [Citation(s) in RCA: 126] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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65
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Trave A, Buda F, Selloni A. CdS Microclusters in Sodalite Frameworks of Different Composition: A Density Functional Study. J Phys Chem B 1998. [DOI: 10.1021/jp972088h] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- A. Trave
- Department of Physical Chemistry, University of Geneva, CH-1211 Geneva, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB-Ecublens, CH-1015 Lausanne, Switzerland, INFM, Forum Laboratory, Scuola Normale Superiore, I-56126 Pisa, Italy, and II Facoltà di Scienze MM.FF.NN., Università di Milano, Sede di Como, I-22100 Como, Italy
| | - F. Buda
- Department of Physical Chemistry, University of Geneva, CH-1211 Geneva, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB-Ecublens, CH-1015 Lausanne, Switzerland, INFM, Forum Laboratory, Scuola Normale Superiore, I-56126 Pisa, Italy, and II Facoltà di Scienze MM.FF.NN., Università di Milano, Sede di Como, I-22100 Como, Italy
| | - A. Selloni
- Department of Physical Chemistry, University of Geneva, CH-1211 Geneva, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB-Ecublens, CH-1015 Lausanne, Switzerland, INFM, Forum Laboratory, Scuola Normale Superiore, I-56126 Pisa, Italy, and II Facoltà di Scienze MM.FF.NN., Università di Milano, Sede di Como, I-22100 Como, Italy
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66
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Campana L, Selloni A, Weber J, Goursot A. Cation Siting and Dynamical Properties of Zeolite Offretite from First-Principles Molecular Dynamics. J Phys Chem B 1997. [DOI: 10.1021/jp971167q] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- L. Campana
- Department of Physical Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB−Ecublens, CH-1015 Lausanne, Switzerland, and UMR 5618 CNRS, National School of Chemistry, 8 rue de l'Ecole Normale, F-34053 Montpellier, France
| | - A. Selloni
- Department of Physical Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB−Ecublens, CH-1015 Lausanne, Switzerland, and UMR 5618 CNRS, National School of Chemistry, 8 rue de l'Ecole Normale, F-34053 Montpellier, France
| | - J. Weber
- Department of Physical Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB−Ecublens, CH-1015 Lausanne, Switzerland, and UMR 5618 CNRS, National School of Chemistry, 8 rue de l'Ecole Normale, F-34053 Montpellier, France
| | - A. Goursot
- Department of Physical Chemistry, University of Geneva, 30 quai E. Ansermet, CH-1211 Geneva 4, Switzerland, Institute IRRMA, Swiss Federal Institute of Technology, PHB−Ecublens, CH-1015 Lausanne, Switzerland, and UMR 5618 CNRS, National School of Chemistry, 8 rue de l'Ecole Normale, F-34053 Montpellier, France
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67
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Ursenbach CP, Calhoun A, Voth GA. A first-principles simulation of the semiconductor/water interface. J Chem Phys 1997. [DOI: 10.1063/1.473794] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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68
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Mattila T, Nieminen RM. Ab initio study of oxygen point defects in GaAs, GaN, and AlN. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:16676-16682. [PMID: 9985795 DOI: 10.1103/physrevb.54.16676] [Citation(s) in RCA: 251] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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69
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Tateyama Y, Ogitsu T, Kusakabe K, Tsuneyuki S. Constant-pressure first-principles studies on the transition states of the graphite-diamond transformation. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:14994-15001. [PMID: 9985555 DOI: 10.1103/physrevb.54.14994] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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70
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Daul C, Frioud M, Schafer O, Selloni A. Non-empirical dynamical DFT calculation of the Berry pseudorotation of PF5. Chem Phys Lett 1996. [DOI: 10.1016/0009-2614(96)01056-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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71
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Kresse G, Furthmüller J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. PHYSICAL REVIEW. B, CONDENSED MATTER 1996. [PMID: 9984901 DOI: 10.1016/0927-0256(96)00008-0] [Citation(s) in RCA: 20440] [Impact Index Per Article: 730.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/17/2023]
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72
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Kresse G, Furthmüller J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:11169-11186. [PMID: 9984901 DOI: 10.1103/physrevb.54.11169] [Citation(s) in RCA: 32414] [Impact Index Per Article: 1157.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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73
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Pöykkö S, Puska MJ, Alatalo M, Nieminen RM. Metastable defect complexes in GaAs. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:7909-7916. [PMID: 9984466 DOI: 10.1103/physrevb.54.7909] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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74
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Probert M, Fisher A. Potential for a novel μSR experiment — the results of an ab initio study. Chem Phys Lett 1996. [DOI: 10.1016/0009-2614(96)00760-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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75
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FILINOV VS. Wigner approach to quantum statistical mechanics and quantum generalization molecular dynamics method. Part 1. Mol Phys 1996. [DOI: 10.1080/00268979609484533] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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76
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Gonze X. Towards a potential-based conjugate gradient algorithm for order-N self-consistent total energy calculations. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:4383-4386. [PMID: 9986376 DOI: 10.1103/physrevb.54.4383] [Citation(s) in RCA: 82] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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77
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Mattila T, Seitsonen AP, Nieminen RM. Large atomic displacements associated with the nitrogen antisite in GaN. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 54:1474-1477. [PMID: 9985976 DOI: 10.1103/physrevb.54.1474] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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78
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Pasquarello A, Hybertsen MS, Car R. Theory of Si 2p core-level shifts at the Si(001)-SiO2 interface. PHYSICAL REVIEW. B, CONDENSED MATTER 1996; 53:10942-10950. [PMID: 9982666 DOI: 10.1103/physrevb.53.10942] [Citation(s) in RCA: 71] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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79
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Bernasconi M, Parrinello M, Chiarotti GL, Focher P, Tosatti E. Anisotropic a-C:H from compression of polyacetylene. PHYSICAL REVIEW LETTERS 1996; 76:2081-2084. [PMID: 10060601 DOI: 10.1103/physrevlett.76.2081] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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80
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Modeling Materials by Ab-Initio Molecular Dynamics. ACTA ACUST UNITED AC 1996. [DOI: 10.1007/978-1-4613-0461-6_3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2023]
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81
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Mauri F, Car R. First-principles study of excitonic self-trapping in diamond. PHYSICAL REVIEW LETTERS 1995; 75:3166-3169. [PMID: 10059511 DOI: 10.1103/physrevlett.75.3166] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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82
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de Wijs GA, Pastore G, Selloni A, van der Lugt W. First‐principles molecular‐dynamics simulation of liquid CsPb. J Chem Phys 1995. [DOI: 10.1063/1.470590] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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83
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Vittadini A, Selloni A, Casarin M. Binding and diffusion of hydroxyl radicals on Si(100): A first-principles study. PHYSICAL REVIEW. B, CONDENSED MATTER 1995; 52:5885-5889. [PMID: 9981778 DOI: 10.1103/physrevb.52.5885] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
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84
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Sarnthein J, Pasquarello A, Car R. Structural and electronic properties of liquid and amorphous SiO2: An ab initio molecular dynamics study. PHYSICAL REVIEW LETTERS 1995; 74:4682-4685. [PMID: 10058572 DOI: 10.1103/physrevlett.74.4682] [Citation(s) in RCA: 53] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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85
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Scandolo S, Bernasconi M, Chiarotti GL, Focher P, Tosatti E. Pressure-Induced Transformation Path of Graphite to Diamond. PHYSICAL REVIEW LETTERS 1995; 74:4015-4018. [PMID: 10058391 DOI: 10.1103/physrevlett.74.4015] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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86
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Sugino O, Car R. Ab initio molecular dynamics study of first-order phase transitions: melting of silicon. PHYSICAL REVIEW LETTERS 1995; 74:1823-1826. [PMID: 10057766 DOI: 10.1103/physrevlett.74.1823] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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87
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Pasquarello A, Hybertsen MS, Car R. Si 2p core-level shifts at the Si(001)-SiO2 interface: A first-principles study. PHYSICAL REVIEW LETTERS 1995; 74:1024-1027. [PMID: 10058908 DOI: 10.1103/physrevlett.74.1024] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
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