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Whitfield CA, Hawkins RJ. Immersed Boundary Simulations of Active Fluid Droplets. PLoS One 2016; 11:e0162474. [PMID: 27606609 PMCID: PMC5015911 DOI: 10.1371/journal.pone.0162474] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2016] [Accepted: 08/23/2016] [Indexed: 11/24/2022] Open
Abstract
We present numerical simulations of active fluid droplets immersed in an external fluid in 2-dimensions using an Immersed Boundary method to simulate the fluid droplet interface as a Lagrangian mesh. We present results from two example systems, firstly an active isotropic fluid boundary consisting of particles that can bind and unbind from the interface and generate surface tension gradients through active contractility. Secondly, a droplet filled with an active polar fluid with homeotropic anchoring at the droplet interface. These two systems demonstrate spontaneous symmetry breaking and steady state dynamics resembling cell motility and division and show complex feedback mechanisms with minimal degrees of freedom. The simulations outlined here will be useful for quantifying the wide range of dynamics observable in these active systems and modelling the effects of confinement in a consistent and adaptable way.
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Affiliation(s)
- Carl A. Whitfield
- Department of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom, S3 7RH
- * E-mail:
| | - Rhoda J. Hawkins
- Department of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom, S3 7RH
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52
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Everts JC, Punter MTJJM, Samin S, van der Schoot P, van Roij R. A Landau-de Gennes theory for hard colloidal rods: Defects and tactoids. J Chem Phys 2016; 144:194901. [DOI: 10.1063/1.4948785] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- J. C. Everts
- Institute for Theoretical Physics, Center for Extreme Matter and Emergent Phenomena, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands
| | | | - S. Samin
- Institute for Theoretical Physics, Center for Extreme Matter and Emergent Phenomena, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands
| | - P. van der Schoot
- Institute for Theoretical Physics, Center for Extreme Matter and Emergent Phenomena, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands
- Theory of Polymers and Soft Matter Group, Department of Applied Physics, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| | - R. van Roij
- Institute for Theoretical Physics, Center for Extreme Matter and Emergent Phenomena, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands
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53
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Marth W, Praetorius S, Voigt A. A mechanism for cell motility by active polar gels. J R Soc Interface 2016; 12:rsif.2015.0161. [PMID: 25926698 DOI: 10.1098/rsif.2015.0161] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
We analyse a generic motility model, with the motility mechanism arising by contractile stress due to the interaction of myosin and actin. A hydrodynamic active polar gel theory is used to model the cytoplasm of a cell and is combined with a Helfrich-type model to account for membrane properties. The overall model allows consideration of the motility without the necessity for local adhesion. Besides a detailed numerical approach together with convergence studies for the highly nonlinear free boundary problem, we also compare the induced flow field of the motile cell with that of classical squirmer models and identify the motile cell as a puller or pusher, depending on the strength of the myosin-actin interactions.
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Affiliation(s)
- W Marth
- Institut für Wissenschaftliches Rechnen, TU Dresden, Dresden 01062, Germany
| | - S Praetorius
- Institut für Wissenschaftliches Rechnen, TU Dresden, Dresden 01062, Germany
| | - A Voigt
- Institut für Wissenschaftliches Rechnen, TU Dresden, Dresden 01062, Germany
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54
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Ziebert F, Löber J, Aranson IS. Macroscopic Model of Substrate-Based Cell Motility. PHYSICAL MODELS OF CELL MOTILITY 2016. [DOI: 10.1007/978-3-319-24448-8_1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Khoromskaia D, Alexander GP. Motility of active fluid drops on surfaces. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:062311. [PMID: 26764696 DOI: 10.1103/physreve.92.062311] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2015] [Indexed: 06/05/2023]
Abstract
Drops of active liquid crystal have recently shown the ability to self-propel, which was associated with topological defects in the orientation of active filaments [Sanchez et al., Nature 491, 431 (2013)]. Here, we study the onset and different aspects of motility of a three-dimensional drop of active fluid on a planar surface. We analyze theoretically how motility is affected by orientation profiles with defects of various types and locations, by the shape of the drop, and by surface friction at the substrate. In the scope of a thin drop approximation, we derive exact expressions for the flow in the drop that is generated by a given orientation profile. The flow has a natural decomposition into terms that depend entirely on the geometrical properties of the orientation profile, i.e., its bend and splay, and a term coupling the orientation to the shape of the drop. We find that asymmetric splay or bend generates a directed bulk flow and enables the drop to move, with maximal speeds achieved when the splay or bend is induced by a topological defect in the interior of the drop. In motile drops the direction and speed of self-propulsion is controlled by friction at the substrate.
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Affiliation(s)
- Diana Khoromskaia
- Department of Physics and Centre for Complexity Science, University of Warwick, Coventry CV4 7AL, United Kingdom
| | - Gareth P Alexander
- Department of Physics and Centre for Complexity Science, University of Warwick, Coventry CV4 7AL, United Kingdom
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56
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Modeling universal dynamics of cell spreading on elastic substrates. Biomech Model Mechanobiol 2015; 14:1265-80. [DOI: 10.1007/s10237-015-0673-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2014] [Accepted: 03/31/2015] [Indexed: 10/24/2022]
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Löber J, Ziebert F, Aranson IS. Collisions of deformable cells lead to collective migration. Sci Rep 2015; 5:9172. [PMID: 25779619 PMCID: PMC4361886 DOI: 10.1038/srep09172] [Citation(s) in RCA: 86] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2014] [Accepted: 02/19/2015] [Indexed: 11/10/2022] Open
Abstract
Collective migration of eukaryotic cells plays a fundamental role in tissue growth, wound healing and immune response. The motion, arising spontaneously or in response to chemical and mechanical stimuli, is also important for understanding life-threatening pathologies, such as cancer and metastasis formation. We present a phase-field model to describe the movement of many self-organized, interacting cells. The model takes into account the main mechanisms of cell motility - acto-myosin dynamics, as well as substrate-mediated and cell-cell adhesion. It predicts that collective cell migration emerges spontaneously as a result of inelastic collisions between neighboring cells: collisions lead to a mutual alignment of the cell velocities and to the formation of coherently-moving multi-cellular clusters. Small cell-to-cell adhesion, in turn, reduces the propensity for large-scale collective migration, while higher adhesion leads to the formation of moving bands. Our study provides valuable insight into biological processes associated with collective cell motility.
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Affiliation(s)
- Jakob Löber
- Institut für Theoretische Physik, Hardenbergstrasse 36, EW 7-1, Technische Universität Berlin, 10623 Berlin, Germany
| | - Falko Ziebert
- 1] Physikalisches Institut, Albert-Ludwigs-Universität Freiburg, Hermann-Herder-Strasse 3, 79104 Freiburg, Germany [2] Institut Charles Sadron, CNRS-UPR22, 23 rue du Loess, 67034 Strasbourg Cedex 2, France
| | - Igor S Aranson
- 1] Materials Science Division, Argonne National Laboratory, 9700 S. Cass Avenue, Argonne, IL 60439, USA [2] Engineering Sciences and Applied Mathematics, Northwestern University, 2145 Sheridan Road, Evanston, IL 60202, USA
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Tjhung E, Tiribocchi A, Marenduzzo D, Cates ME. A minimal physical model captures the shapes of crawling cells. Nat Commun 2015; 6:5420. [PMID: 25607536 DOI: 10.1038/ncomms6420] [Citation(s) in RCA: 90] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2013] [Accepted: 09/30/2014] [Indexed: 12/26/2022] Open
Abstract
Cell motility in higher organisms (eukaryotes) is crucial to biological functions ranging from wound healing to immune response, and also implicated in diseases such as cancer. For cells crawling on hard surfaces, significant insights into motility have been gained from experiments replicating such motion in vitro. Such experiments show that crawling uses a combination of actin treadmilling (polymerization), which pushes the front of a cell forward, and myosin-induced stress (contractility), which retracts the rear. Here we present a simplified physical model of a crawling cell, consisting of a droplet of active polar fluid with contractility throughout, but treadmilling connected to a thin layer near the supporting wall. The model shows a variety of shapes and/or motility regimes, some closely resembling cases seen experimentally. Our work strongly supports the view that cellular motility exploits autonomous physical mechanisms whose operation does not need continuous regulatory effort.
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Affiliation(s)
- E Tjhung
- SUPA, School of Physics and Astronomy, University of Edinburgh, JCMB Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK
| | - A Tiribocchi
- SUPA, School of Physics and Astronomy, University of Edinburgh, JCMB Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK
| | - D Marenduzzo
- SUPA, School of Physics and Astronomy, University of Edinburgh, JCMB Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK
| | - M E Cates
- SUPA, School of Physics and Astronomy, University of Edinburgh, JCMB Kings Buildings, Mayfield Road, Edinburgh EH9 3JZ, UK
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Blow ML, Thampi SP, Yeomans JM. Biphasic, lyotropic, active nematics. PHYSICAL REVIEW LETTERS 2014; 113:248303. [PMID: 25541809 DOI: 10.1103/physrevlett.113.248303] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2014] [Indexed: 05/23/2023]
Abstract
We perform dynamical simulations of a two-dimensional active nematic fluid in coexistence with an isotropic fluid. Drops of active nematic become elongated, and an effective anchoring develops at the nematic-isotropic interface. The activity also causes an undulatory instability of the interface. This results in defects of positive topological charge being ejected into the nematic, leaving the interface with a diffuse negative charge. Quenching the active lyotropic fluid results in a steady state in which phase-separating domains are elongated and then torn apart by active stirring.
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Affiliation(s)
- Matthew L Blow
- Centro de Física Teórica e Computacional, Avenida Professor Gama Pinto 2, P-1649-003 Lisboa, Portugal and Departamento de Física da Faculdade de Ciências, Universidade de Lisboa, P-1749-016 Lisboa, Portugal
| | - Sumesh P Thampi
- The Rudolf Peierls Centre for Theoretical Physics, 1 Keble Road, Oxford OX1 3NP, United Kingdom
| | - Julia M Yeomans
- The Rudolf Peierls Centre for Theoretical Physics, 1 Keble Road, Oxford OX1 3NP, United Kingdom
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60
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De Magistris G, Tiribocchi A, Whitfield CA, Hawkins RJ, Cates ME, Marenduzzo D. Spontaneous motility of passive emulsion droplets in polar active gels. SOFT MATTER 2014; 10:7826-7837. [PMID: 25156695 DOI: 10.1039/c4sm00937a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
We study by computer simulations the dynamics of a droplet of passive, isotropic fluid, embedded in a polar active gel. The latter represents a fluid of active force dipoles, which exert either contractile or extensile stresses on their surroundings, modelling for instance a suspension of cytoskeletal filaments and molecular motors. When the polarisation of the active gel is anchored normal to the droplet at its surface, the nematic elasticity of the active gel drives the formation of a hedgehog defect; this defect then drives an active flow which propels the droplet forward. In an extensile gel, motility can occur even with tangential anchoring, which is compatible with a defect-free polarisation pattern. In this case, upon increasing activity the droplet first rotates uniformly, and then undergoes a discontinuous nonequilibrium transition into a translationally motile state, powered by bending deformations in the surrounding active medium.
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Affiliation(s)
- G De Magistris
- SUPA, School of Physics and Astronomy, University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ, UK.
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