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Agrawal R, Gillies JP, Zang JL, Zhang J, Garrott SR, Shibuya H, Nandakumar J, DeSantis ME. The KASH5 protein involved in meiotic chromosomal movements is a novel dynein activating adaptor. eLife 2022; 11:e78201. [PMID: 35703493 PMCID: PMC9242646 DOI: 10.7554/elife.78201] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Accepted: 06/14/2022] [Indexed: 11/30/2022] Open
Abstract
Dynein harnesses ATP hydrolysis to move cargo on microtubules in multiple biological contexts. Dynein meets a unique challenge in meiosis by moving chromosomes tethered to the nuclear envelope to facilitate homolog pairing essential for gametogenesis. Though processive dynein motility requires binding to an activating adaptor, the identity of the activating adaptor required for dynein to move meiotic chromosomes is unknown. We show that the meiosis-specific nuclear-envelope protein KASH5 is a dynein activating adaptor: KASH5 directly binds dynein using a mechanism conserved among activating adaptors and converts dynein into a processive motor. We map the dynein-binding surface of KASH5, identifying mutations that abrogate dynein binding in vitro and disrupt recruitment of the dynein machinery to the nuclear envelope in cultured cells and mouse spermatocytes in vivo. Our study identifies KASH5 as the first transmembrane dynein activating adaptor and provides molecular insights into how it activates dynein during meiosis.
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Affiliation(s)
- Ritvija Agrawal
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
| | - John P Gillies
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
| | - Juliana L Zang
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
| | - Jingjing Zhang
- Department of Chemistry and Molecular Biology, University of GothenburgGothenburgSweden
| | - Sharon R Garrott
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
- Biological Chemistry, University of MichiganAnn ArborUnited States
| | - Hiroki Shibuya
- Department of Chemistry and Molecular Biology, University of GothenburgGothenburgSweden
| | - Jayakrishnan Nandakumar
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
| | - Morgan E DeSantis
- Department of Molecular, Cellular and Developmental Biology, University of Michigan-Ann ArborAnn ArborUnited States
- Biological Chemistry, University of MichiganAnn ArborUnited States
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Seo D, Gammon DB. Manipulation of Host Microtubule Networks by Viral Microtubule-Associated Proteins. Viruses 2022; 14:v14050979. [PMID: 35632720 PMCID: PMC9147350 DOI: 10.3390/v14050979] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Revised: 05/03/2022] [Accepted: 05/04/2022] [Indexed: 12/19/2022] Open
Abstract
Diverse DNA and RNA viruses utilize cytoskeletal networks to efficiently enter, replicate, and exit the host cell, while evading host immune responses. It is well established that the microtubule (MT) network is commonly hijacked by viruses to traffic to sites of replication after entry and to promote egress from the cell. However, mounting evidence suggests that the MT network is also a key regulator of host immune responses to infection. At the same time, viruses have acquired mechanisms to manipulate and/or usurp MT networks to evade these immune responses. Central to most interactions of viruses with the MT network are virally encoded microtubule-associated proteins (MAPs) that bind to MTs directly or indirectly. These MAPs associate with MTs and other viral or cellular MAPs to regulate various aspects of the MT network, including MT dynamics, MT-dependent transport via motor proteins such as kinesins and dyneins, and MT-dependent regulation of innate immune responses. In this review, we examine how viral MAP interactions with the MT network facilitate viral replication and immune evasion.
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Ferro LS, Fang Q, Eshun-Wilson L, Fernandes J, Jack A, Farrell DP, Golcuk M, Huijben T, Costa K, Gur M, DiMaio F, Nogales E, Yildiz A. Structural and functional insight into regulation of kinesin-1 by microtubule-associated protein MAP7. Science 2022; 375:326-331. [PMID: 35050657 PMCID: PMC8985661 DOI: 10.1126/science.abf6154] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Microtubule (MT)-associated protein 7 (MAP7) is a required cofactor for kinesin-1-driven transport of intracellular cargoes. Using cryo-electron microscopy and single-molecule imaging, we investigated how MAP7 binds MTs and facilitates kinesin-1 motility. The MT-binding domain (MTBD) of MAP7 bound MTs as an extended α helix between the protofilament ridge and the site of lateral contact. Unexpectedly, the MTBD partially overlapped with the binding site of kinesin-1 and inhibited its motility. However, by tethering kinesin-1 to the MT, the projection domain of MAP7 prevented dissociation of the motor and facilitated its binding to available neighboring sites. The inhibitory effect of the MTBD dominated as MTs became saturated with MAP7. Our results reveal biphasic regulation of kinesin-1 by MAP7 in the context of their competitive binding to MTs.
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Affiliation(s)
- Luke S Ferro
- Department of Molecular and Cellular Biology, University of California, Berkeley CA, USA
| | - Qianglin Fang
- Department of Molecular and Cellular Biology, University of California, Berkeley CA, USA
| | - Lisa Eshun-Wilson
- Department of Molecular and Cellular Biology, University of California, Berkeley CA, USA
| | | | - Amanda Jack
- Biophysics Graduate Group, University of California, Berkeley CA, USA
| | - Daniel P Farrell
- Department of Biochemistry, University of Washington, Seattle, WA, USA
| | - Mert Golcuk
- Department of Mechanical Engineering, Istanbul Technical University, Istanbul, Turkey
| | - Teun Huijben
- Department of Imaging Physics, Delft University of Technology, Delft, Netherlands
| | | | - Mert Gur
- Department of Mechanical Engineering, Istanbul Technical University, Istanbul, Turkey
| | - Frank DiMaio
- Department of Biochemistry, University of Washington, Seattle, WA, USA
| | - Eva Nogales
- Department of Molecular and Cellular Biology, University of California, Berkeley CA, USA
- Biophysics Graduate Group, University of California, Berkeley CA, USA
- Howard Hughes Medical Institute, Chevy Chase MD, USA
| | - Ahmet Yildiz
- Department of Molecular and Cellular Biology, University of California, Berkeley CA, USA
- Biophysics Graduate Group, University of California, Berkeley CA, USA
- Physics Department, University of California, Berkeley CA, USA
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Regulation of spatially restricted gene expression: linking RNA localization and phase separation. Biochem Soc Trans 2021; 49:2591-2600. [PMID: 34821361 DOI: 10.1042/bst20210320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Revised: 11/08/2021] [Accepted: 11/09/2021] [Indexed: 11/17/2022]
Abstract
Subcellular restriction of gene expression is crucial to the functioning of a wide variety of cell types. The cellular machinery driving spatially restricted gene expression has been studied for many years, but recent advances have highlighted novel mechanisms by which cells can generate subcellular microenvironments with specialized gene expression profiles. Particularly intriguing are recent findings that phase separation plays a role in certain RNA localization pathways. The burgeoning field of phase separation has revolutionized how we view cellular compartmentalization, revealing that, in addition to membrane-bound organelles, phase-separated cytoplasmic microenvironments - termed biomolecular condensates - are compositionally and functionally distinct from the surrounding cytoplasm, without the need for a lipid membrane. The coupling of phase separation and RNA localization allows for precise subcellular targeting, robust translational repression and dynamic recruitment of accessory proteins. Despite the growing interest in the intersection between RNA localization and phase separation, it remains to be seen how exactly components of the localization machinery, particularly motor proteins, are able to associate with these biomolecular condensates. Further studies of the formation, function, and transport of biomolecular condensates promise to provide a new mechanistic understanding of how cells restrict gene expression at a subcellular level.
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