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Nadal E, Zhong J, Lin J, Reddy RM, Ramnath N, Orringer MB, Chang AC, Beer DG, Chen G. A MicroRNA cluster at 14q32 drives aggressive lung adenocarcinoma. Clin Cancer Res 2014; 20:3107-17. [PMID: 24833665 DOI: 10.1158/1078-0432.ccr-13-3348] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
PURPOSE To determine whether different subtypes of lung adenocarcinoma (AC) have distinct microRNA (miRNA) expression profiles, and to identify miRNAs associated with aggressive subgroups of resected lung AC. EXPERIMENTAL DESIGN miRNA expression profile analysis was performed in 91 resected lung AC and 10 matched nonmalignant lung tissues using a PCR-based array. An independent cohort of 60 lung ACs was used for validating by quantitative PCR the top 3 prognostic miRNAs. Gene-expression data from 51 miRNA profiled tumors was used for determining transcript-specific miRNA correlations and gene-enrichment pathway analysis. RESULTS Unsupervised hierarchical clustering of 356 miRNAs identified 3 major clusters of lung AC correlated with stage (P = 0.023), tumor differentiation (P < 0.003), and IASLC histologic subtype of lung AC (P < 0.005). Patients classified in cluster 3 had worse survival as compared with the other clusters. Eleven of 22 miRNAs associated with poor survival were encoded in a large miRNA cluster at 14q32. The top 3 prognostic 14q32 miRNAs (miR-411, miR-370, and miR-376a) were validated in an independent cohort of 60 lung AC. A significant association with cell migration and cell adhesion was found by integrating gene-expression data with miR-411, miR-370, and miR-376a expression. miR-411 knockdown significantly reduced cell migration in lung AC cell lines and this miRNA was overexpressed in tumors from patients who relapsed systemically. CONCLUSIONS Different morphologic subtypes of lung AC have distinct miRNA expression profiles, and 3 miRNAs encoded at 14q32 (miR-411, miR-370, and miR-376a) were associated with poor survival after lung AC resection.
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Affiliation(s)
- Ernest Nadal
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Jinjie Zhong
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, ChinaAuthors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Jules Lin
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Rishindra M Reddy
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Nithya Ramnath
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Mark B Orringer
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Andrew C Chang
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - David G Beer
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
| | - Guoan Chen
- Authors' Affiliations: Section of Thoracic Surgery, Department of Surgery, University of Michigan Medical School; Division of Medical Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan; and Xinjiang Medical University, Xinjiang, China
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