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Langner T, Kamoun S, Belhaj K. CRISPR Crops: Plant Genome Editing Toward Disease Resistance. ANNUAL REVIEW OF PHYTOPATHOLOGY 2018; 56:479-512. [PMID: 29975607 DOI: 10.1146/annurev-phyto-080417-050158] [Citation(s) in RCA: 113] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Genome editing by sequence-specific nucleases (SSNs) has revolutionized biology by enabling targeted modifications of genomes. Although routine plant genome editing emerged only a few years ago, we are already witnessing the first applications to improve disease resistance. In particular, CRISPR-Cas9 has democratized the use of genome editing in plants thanks to the ease and robustness of this method. Here, we review the recent developments in plant genome editing and its application to enhancing disease resistance against plant pathogens. In the future, bioedited disease resistant crops will become a standard tool in plant breeding.
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Affiliation(s)
- Thorsten Langner
- The Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom;
| | - Sophien Kamoun
- The Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom;
| | - Khaoula Belhaj
- The Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, United Kingdom;
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Beattie GA, Hatfield BM, Dong H, McGrane RS. Seeing the Light: The Roles of Red- and Blue-Light Sensing in Plant Microbes. ANNUAL REVIEW OF PHYTOPATHOLOGY 2018; 56:41-66. [PMID: 29768135 DOI: 10.1146/annurev-phyto-080417-045931] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Plants collect, concentrate, and conduct light throughout their tissues, thus enhancing light availability to their resident microbes. This review explores the role of photosensing in the biology of plant-associated bacteria and fungi, including the molecular mechanisms of red-light sensing by phytochromes and blue-light sensing by LOV (light-oxygen-voltage) domain proteins in these microbes. Bacteriophytochromes function as major drivers of the bacterial transcriptome and mediate light-regulated suppression of virulence, motility, and conjugation in some phytopathogens and light-regulated induction of the photosynthetic apparatus in a stem-nodulating symbiont. Bacterial LOV proteins also influence light-mediated changes in both symbiotic and pathogenic phenotypes. Although red-light sensing by fungal phytopathogens is poorly understood, fungal LOV proteins contribute to blue-light regulation of traits, including asexual development and virulence. Collectively, these studies highlight that plant microbes have evolved to exploit light cues and that light sensing is often coupled with sensing other environmental signals.
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Affiliation(s)
- Gwyn A Beattie
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Bridget M Hatfield
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Haili Dong
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Regina S McGrane
- Department of Biological Sciences, Southwestern Oklahoma State University, Weatherford, Oklahoma 73096, USA
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Yang YX, Wu C, Ahammed GJ, Wu C, Yang Z, Wan C, Chen J. Red Light-Induced Systemic Resistance Against Root-Knot Nematode Is Mediated by a Coordinated Regulation of Salicylic Acid, Jasmonic Acid and Redox Signaling in Watermelon. FRONTIERS IN PLANT SCIENCE 2018; 9:899. [PMID: 30042771 PMCID: PMC6048386 DOI: 10.3389/fpls.2018.00899] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Accepted: 06/07/2018] [Indexed: 02/05/2023]
Abstract
Red light (RL) can stimulate plant defense against foliar diseases; however, its role in activation of systemic defense against root diseases remains unclear. Here, the effect of RL on root knot nematode Meloidogyne incognita (RKN) infestation was investigated in watermelon plants (Citrullus lanatus L.). Plants were exposed to 200 μmol m-2 s-1 photosynthetic photon flux density RL at the canopy level for 21 days using light-emitting photodiodes. The results showed that RL significantly suppressed gall formation and nematode development, which was closely associated with the RL-induced attenuation of oxidative stress in roots. Gene expression analysis showed that RL caused a transient upregulation of PR1 and WRKY70 transcripts at 7 days post inoculation in RKN-infected plants. Further investigation revealed that RL-induced systemic defense against RKN was attributed to increased jasmonic acid (JA) and salicylic acid (SA) content, and transcript levels of their biosynthetic genes in roots. Interestingly, while malondialdehyde content decreased, H2O2 accumulation increased in RL-treated RKN-plants, indicating a potential signaling role of H2O2 in mediating RL-induced systemic defense. Furthermore, analysis of enzymatic and non-enzymatic antidoxidants revealed that RL-induced enhanced defense agaist RKN was also attributed to increased activities of antioxidant enzymes as well as redox homeostasis. Taken together, these findings suggest that RL could enhance systemic resistance against RKN, which is mediated by a coordinated regulation of JA- and SA-dependent signaling, antioxidants, and redox homeostasis in watermelon plants.
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Affiliation(s)
- You-xin Yang
- Jiangxi Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
| | - Chaoqun Wu
- Jiangxi Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
| | - Golam J. Ahammed
- College of Forestry, Henan University of Science and Technology, Luoyang, China
| | - Caijun Wu
- Jiangxi Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
| | - Zemao Yang
- Germplasm Lab, Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, China
| | - Chunpeng Wan
- Jiangxi Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
| | - Jinyin Chen
- Jiangxi Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Pingxiang University, Pingxiang, China
- *Correspondence: Jinyin Chen,
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Chaignaud P, Maucourt B, Weiman M, Alberti A, Kolb S, Cruveiller S, Vuilleumier S, Bringel F. Genomic and Transcriptomic Analysis of Growth-Supporting Dehalogenation of Chlorinated Methanes in Methylobacterium. Front Microbiol 2017; 8:1600. [PMID: 28919881 PMCID: PMC5585157 DOI: 10.3389/fmicb.2017.01600] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2017] [Accepted: 08/07/2017] [Indexed: 11/13/2022] Open
Abstract
Bacterial adaptation to growth with toxic halogenated chemicals was explored in the context of methylotrophic metabolism of Methylobacterium extorquens, by comparing strains CM4 and DM4, which show robust growth with chloromethane and dichloromethane, respectively. Dehalogenation of chlorinated methanes initiates growth-supporting degradation, with intracellular release of protons and chloride ions in both cases. The core, variable and strain-specific genomes of strains CM4 and DM4 were defined by comparison with genomes of non-dechlorinating strains. In terms of gene content, adaptation toward dehalogenation appears limited, strains CM4 and DM4 sharing between 75 and 85% of their genome with other strains of M. extorquens. Transcript abundance in cultures of strain CM4 grown with chloromethane and of strain DM4 grown with dichloromethane was compared to growth with methanol as a reference C1 growth substrate. Previously identified strain-specific dehalogenase-encoding genes were the most transcribed with chlorinated methanes, alongside other genes encoded by genomic islands (GEIs) and plasmids involved in growth with chlorinated compounds as carbon and energy source. None of the 163 genes shared by strains CM4 and DM4 but not by other strains of M. extorquens showed higher transcript abundance in cells grown with chlorinated methanes. Among the several thousand genes of the M. extorquens core genome, 12 genes were only differentially abundant in either strain CM4 or strain DM4. Of these, 2 genes of known function were detected, for the membrane-bound proton translocating pyrophosphatase HppA and the housekeeping molecular chaperone protein DegP. This indicates that the adaptive response common to chloromethane and dichloromethane is limited at the transcriptional level, and involves aspects of the general stress response as well as of a dehalogenation-specific response to intracellular hydrochloric acid production. Core genes only differentially abundant in either strain CM4 or strain DM4 total 13 and 58 CDS, respectively. Taken together, the obtained results suggest different transcriptional responses of chloromethane- and dichloromethane-degrading M. extorquens strains to dehalogenative metabolism, and substrate- and pathway-specific modes of growth optimization with chlorinated methanes.
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Affiliation(s)
- Pauline Chaignaud
- Department of Molecular Genetics, Genomics, and Microbiology, UMR 7156 Université de Strasbourg (UNISTRA)-Centre National de la Recherche ScientifiqueStrasbourg, France.,Department of Ecological Microbiology, University of BayreuthBayreuth, Germany
| | - Bruno Maucourt
- Department of Molecular Genetics, Genomics, and Microbiology, UMR 7156 Université de Strasbourg (UNISTRA)-Centre National de la Recherche ScientifiqueStrasbourg, France
| | - Marion Weiman
- UMR 8030 Centre National de la Recherche Scientifique-CEA, DSV/IG/Genoscope, LABGeMEvry, France
| | - Adriana Alberti
- UMR 8030 Centre National de la Recherche Scientifique-CEA, DSV/IG/Genoscope, LABGeMEvry, France
| | - Steffen Kolb
- Department of Ecological Microbiology, University of BayreuthBayreuth, Germany.,Institute of Landscape Biogeochemistry-Leibniz Centre for Agricultural Landscape Research (ZALF)Müncheberg, Germany
| | - Stéphane Cruveiller
- UMR 8030 Centre National de la Recherche Scientifique-CEA, DSV/IG/Genoscope, LABGeMEvry, France
| | - Stéphane Vuilleumier
- Department of Molecular Genetics, Genomics, and Microbiology, UMR 7156 Université de Strasbourg (UNISTRA)-Centre National de la Recherche ScientifiqueStrasbourg, France
| | - Françoise Bringel
- Department of Molecular Genetics, Genomics, and Microbiology, UMR 7156 Université de Strasbourg (UNISTRA)-Centre National de la Recherche ScientifiqueStrasbourg, France
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Kraiselburd I, Moyano L, Carrau A, Tano J, Orellano EG. Bacterial Photosensory Proteins and Their Role in Plant-pathogen Interactions. Photochem Photobiol 2017; 93:666-674. [DOI: 10.1111/php.12754] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2016] [Accepted: 01/19/2017] [Indexed: 11/30/2022]
Affiliation(s)
- Ivana Kraiselburd
- Instituto de Biología Molecular y Celular de Rosario; Consejo Nacional de Investigaciones Científicas y Técnicas; Facultad de Ciencias Bioquímicas y Farmacéuticas; Universidad Nacional de Rosario; Rosario Argentina
| | - Laura Moyano
- Instituto de Biología Molecular y Celular de Rosario; Consejo Nacional de Investigaciones Científicas y Técnicas; Facultad de Ciencias Bioquímicas y Farmacéuticas; Universidad Nacional de Rosario; Rosario Argentina
| | - Analía Carrau
- Instituto de Biología Molecular y Celular de Rosario; Consejo Nacional de Investigaciones Científicas y Técnicas; Facultad de Ciencias Bioquímicas y Farmacéuticas; Universidad Nacional de Rosario; Rosario Argentina
| | - Josefina Tano
- Instituto de Biología Molecular y Celular de Rosario; Consejo Nacional de Investigaciones Científicas y Técnicas; Facultad de Ciencias Bioquímicas y Farmacéuticas; Universidad Nacional de Rosario; Rosario Argentina
| | - Elena G. Orellano
- Instituto de Biología Molecular y Celular de Rosario; Consejo Nacional de Investigaciones Científicas y Técnicas; Facultad de Ciencias Bioquímicas y Farmacéuticas; Universidad Nacional de Rosario; Rosario Argentina
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Zhu X, Robe E, Jomat L, Aldon D, Mazars C, Galaud JP. CML8, an Arabidopsis Calmodulin-Like Protein, Plays a Role in Pseudomonas syringae Plant Immunity. PLANT & CELL PHYSIOLOGY 2017; 58:307-319. [PMID: 27837097 DOI: 10.1093/pcp/pcw189] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2016] [Accepted: 11/01/2016] [Indexed: 05/05/2023]
Abstract
Calcium is a universal second messenger involved in various cellular processes including plant development and stress responses. Its conversion into biological responses requires the presence of calcium sensor relays such as calmodulin (CaM) and calmodulin-like (CML) proteins. While the role of CaM is well described, the functions CML proteins remain largely uncharacterized. Here, we show that Arabidopsis CML8 expression is strongly and transiently induced by Pseudomonas syringae, and reverse genetic approaches indicated that the overexpression of CML8 confers on plants a better resistance to pathogenic bacteria compared with wild-type, knock-down and knock-out lines, indicating that CML8 participates as a positive regulator in plant immunity. However, this difference disappeared when inoculations were performed using bacteria unable to inject effectors into a plant host cell or deficient for some effectors known to target the salicylic acid (SA) signaling pathway. SA content and PR1 protein accumulation were altered in CML8 transgenic lines, supporting a role for CML8 in SA-dependent processes. Pathogen-associated molecular pattern (PAMP) treatments with flagellin and elf18 peptides have no effects on CML8 gene expression and do not modify root growth of CML8 knock-down and overexpressing lines compared with wild-type plants. Collectively, our results support a role for CML8 in plant immunity against P. syringae.
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Affiliation(s)
- Xiaoyang Zhu
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
| | - Eugénie Robe
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
| | - Lucile Jomat
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
- Institut Jacques Monod, UMR 7592, CNRS-Université Paris Diderot, 15 rue Hélène Brion, Paris Cédex, France
| | - Didier Aldon
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
| | - Christian Mazars
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
| | - Jean-Philippe Galaud
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, 24, chemin de Borde-Rouge, Auzeville, BP, Castanet-Tolosan, France
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Physiological response and sulfur metabolism of the V. dahliae-infected tomato plants in tomato/potato onion companion cropping. Sci Rep 2016; 6:36445. [PMID: 27808257 PMCID: PMC5093433 DOI: 10.1038/srep36445] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2016] [Accepted: 10/17/2016] [Indexed: 12/23/2022] Open
Abstract
Companion cropping with potato onions (Allium cepa var. agrogatum Don.) can enhance the disease resistance of tomato plants (Solanum lycopersicum) to Verticillium dahliae infection by increasing the expressions of genes related to disease resistance. However, it is not clear how tomato plants physiologically respond to V. dahliae infection and what roles sulfur plays in the disease-resistance. Pot experiments were performed to examine changes in the physiology and sulfur metabolism of tomato roots infected by V. dahliae under the companion cropping (tomato/potato onion). The results showed that the companion cropping increased the content of total phenol, lignin and glutathione and increased the activities of peroxidase, polyphenol oxidase and phenylalanine ammonia lyase in the roots of tomato plants. RNA-seq analysis showed that the expressions of genes involved in sulfur uptake and assimilation, and the formation of sulfur-containing defense compounds (SDCs) were up-regulated in the V. dahlia-infected tomatoes in the companion cropping. In addition, the interactions among tomato, potato onion and V. dahliae induced the expression of the high- affinity sulfate transporter gene in the tomato roots. These results suggest that sulfur may play important roles in tomato disease resistance against V. dahliae.
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58
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Li Y, Tian S, Yang X, Wang X, Guo Y, Ni H. Transcriptomic analysis reveals distinct resistant response by physcion and chrysophanol against cucumber powdery mildew. PeerJ 2016; 4:e1991. [PMID: 27231648 PMCID: PMC4878370 DOI: 10.7717/peerj.1991] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2016] [Accepted: 04/08/2016] [Indexed: 11/20/2022] Open
Abstract
Physcion and chrysophanol induce defense responses against powdery mildew in cucumbers. The combination of these two compounds has synergistic interaction against the disease. We performed RNA-seq on cucumber leaf samples treated with physcion and chrysophanol alone and with their combination. We generated 17.6 Gb of high-quality sequencing data (∼2 Gb per sample) and catalogued the expressions profiles of 12,293 annotated cucumber genes in each sample. We identified numerous differentially expressed genes that exhibited distinct expression patterns among the three treatments. The gene expression patterns of the Chr and Phy treatments were more similar to each other than to the Phy × Chr treatment. The Phy × Chr treatment induced the highest number of differentially expressed genes. This dramatic transcriptional change after Phy × Chr treatment leaves reflects that physcion combined with chrysophanol treatment was most closely associated with induction of disease resistance. The analysis showed that the combination treatment caused expression changes of numerous defense-related genes. These genes have known or potential roles in structural, chemical and signaling defense responses and were enriched in functional gene categories potentially responsible for cucumber resistance. These results clearly demonstrated that disease resistance in cucumber leaves was significantly influenced by the combined physcion and chrysophanol treatment. Thus, physcion and chrysophanol are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to the defense response.
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Affiliation(s)
- Yanping Li
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Shilin Tian
- Novogene Bioinformatics Institute, Beijing, China
- Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya’an Sichuan, China
| | - Xiaojun Yang
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Xin Wang
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Yuhai Guo
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Hanwen Ni
- College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
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Cheng DD, Liu MJ, Sun XB, Zhao M, Chow WS, Sun GY, Zhang ZS, Hu YB. Light Suppresses Bacterial Population through the Accumulation of Hydrogen Peroxide in Tobacco Leaves Infected with Pseudomonas syringae pv. tabaci. FRONTIERS IN PLANT SCIENCE 2016; 7:512. [PMID: 27148334 PMCID: PMC4838606 DOI: 10.3389/fpls.2016.00512] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2015] [Accepted: 03/31/2016] [Indexed: 05/13/2023]
Abstract
Pseudomonas syringae pv. tabaci (Pst) is a hemibiotrophic bacterial pathogen responsible for tobacco wildfire disease. Although considerable research has been conducted on the tobacco plant's tolerance to Pst, the role of light in the responses of the photosystems to Pst infection is poorly understood. This study aimed to elucidate the underlying mechanisms of the reduced photosystem damage in tobacco leaves due to Pst infection under light conditions. Compared to dark conditions, Pst infection under light conditions resulted in less chlorophyll degradation and a smaller decline in photosynthetic function. Although the maximal quantum yield of photosystem II (PSII) and the activity of the photosystem I (PSI) complex decreased as Pst infection progressed, damage to PSI and PSII after infection was reduced under light conditions compared to dark conditions. Pst was 17-fold more abundant in tobacco leaves under dark compared to light conditions at 3 days post inoculation (dpi). Additionally, H2O2 accumulated to a high level in tobacco leaves after Pst infection under light conditions; although to a lesser extent, H2O2 accumulation was also significant under dark conditions. Pretreatment with H2O2 alleviated chlorotic lesions and decreased Pst abundance in tobacco leaves at 3 dpi under dark conditions. MV pretreatment had the same effects under light conditions, whereas 3-(3,4-dichlorophenyl)-1,1-dimethylurea pretreatment aggravated chlorotic lesions and increased the Pst population. These results indicate that chlorotic symptoms and the size of the bacterial population are each negatively correlated with H2O2 accumulation. In other words, light appears to suppress the Pst population in tobacco leaves through the accumulation of H2O2 during infection.
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Affiliation(s)
- Dan-Dan Cheng
- College of Life Science, Northeast Forestry UniversityHarbin, China
| | - Mei-Jun Liu
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural UniversityTai’an, China
| | - Xing-Bin Sun
- College of Life Science, Northeast Forestry UniversityHarbin, China
| | - Min Zhao
- College of Life Science, Northeast Forestry UniversityHarbin, China
| | - Wah S. Chow
- College of Life Science, Northeast Forestry UniversityHarbin, China
- Division of Plant Science, Research School of Biology, The Australian National University, CanberraACT, Australia
| | - Guang-Yu Sun
- College of Life Science, Northeast Forestry UniversityHarbin, China
- *Correspondence: Guang-Yu Sun, ; Zi-Shan Zhang,
| | - Zi-Shan Zhang
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural UniversityTai’an, China
- *Correspondence: Guang-Yu Sun, ; Zi-Shan Zhang,
| | - Yan-Bo Hu
- College of Life Science, Northeast Forestry UniversityHarbin, China
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Fu X, Wu X, Zhou X, Liu S, Shen Y, Wu F. Companion cropping with potato onion enhances the disease resistance of tomato against Verticillium dahliae. FRONTIERS IN PLANT SCIENCE 2015; 6:726. [PMID: 26442040 PMCID: PMC4566073 DOI: 10.3389/fpls.2015.00726] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2015] [Accepted: 08/28/2015] [Indexed: 05/07/2023]
Abstract
Intercropping could alleviate soil-borne diseases, however, few studies focused on the immunity of the host plant induced by the interspecific interactions. To test whether or not intercropping could enhance the disease resistance of host plant, we investigated the effect of companion cropping with potato onion on tomato Verticillium wilt caused by Verticillium dahliae (V. dahliae). To investigate the mechanisms, the root exudates were collected from tomato and potato onion which were grown together or separately, and were used to examine the antifungal activities against V. dahliae in vitro, respectively. Furthermore, RNA-seq was used to examine the expression pattern of genes related to disease resistance in tomato companied with potato onion compared to that in tomato grown alone, under the condition of infection with V. dahliae. The results showed that companion cropping with potato onion could alleviate the incidence and severity of tomato Verticillium wilt. The further studies revealed that the root exudates from tomato companied with potato onion significantly inhibited the mycelia growth and spore germination of V. dahliae. However, there were no significant effects on these two measurements for the root exudates from potato onion grown alone or from potato onion grown with tomato. RNA-seq data analysis showed the disease defense genes associated with pathogenesis-related proteins, biosynthesis of lignin, hormone metabolism and signal transduction were expressed much higher in the tomato companied with potato onion than those in the tomato grown alone, which indicated that these defense genes play important roles in tomato against V. dahliae infection, and meant that the disease resistance of tomato against V. dahliae was enhanced in the companion copping with potato onion. We proposed that companion cropping with potato onion could enhance the disease resistance of tomato against V. dahliae by regulating the expression of genes related to disease resistance response. This may be a potential mechanism for the management of soil-borne plant diseases in the intercropping system.
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Affiliation(s)
- Xuepeng Fu
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
- Department of Life Science and Agroforestry, Qiqihar UniversityQiqihar, China
| | - Xia Wu
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
- Department of Horticulture, Heilongjiang Bayi Agricultural UniversityDaqing, China
| | - Xingang Zhou
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
| | - Shouwei Liu
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
| | - Yanhui Shen
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
| | - Fengzhi Wu
- Department of Horticulture, Northeast Agricultural UniversityHarbin, China
- *Correspondence: Fengzhi Wu, Department of Horticulture, Northeast Agricultural University, No. 59 Mucai Street, XiangFang District, Harbin 150030, China
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