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Abstract
Members of Venturiales (Dothideomycetes) are widely distributed, and comprise saprobes, as well as plant, human and animal pathogens. In spite of their economic importance, the general lack of cultures and DNA data has resulted in taxa being poorly resolved. In the present study five loci, ITS, LSU rDNA, tef1, tub2 and rpb2 are used for analysing 115 venturialean taxa representing 30 genera in three families in the current classification of Venturiales. Based on the multigene phylogenetic analysis, morphological and ecological characteristics, one new family, Cylindrosympodiaceae, and eight new genera are described, namely Bellamyces, Fagicola, Fraxinicola, Fuscohilum,Neofusicladium, Parafusicladium, Pinaceicola and Sterila. In addition, 12 species are described as new to science, and 41 new combinations are proposed. The taxonomic status of 153 species have been re-evaluated with 20 species excluded from Venturiales. Based on this revision of Venturiales, morphological characteristics such as conidial arrangement (solitary or in chains) or conidiogenesis (blastic-solitary, sympodial or annellidic), proved to be significant at generic level. Venturia as currently defined represents a generic complex. Furthermore, plant pathogens appear more terminal in phylogenetic analyses within Venturiaceae and Sympoventuriaceae, suggesting that the ancestral state of Venturiales is most likely saprobic.
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Key Words
- Bellamyces Crous, Coppins & U. Braun
- Bellamyces quercus Crous, Coppins & U. Braun
- Cylindrosympodiaceae Crous, M. Shen & Y. Zhang ter
- Fagicola Crous, M. Shen & Y. Zhang ter
- Fagicola fagi (Crous & de Hoog) Crous, M. Shen & Y. Zhang ter
- Fraxinicola Crous, M. Shen & Y. Zhang ter
- Fraxinicola europaea Crous, M. Shen & Y. Zhang ter
- Fraxinicola fraxini (Aderh.) Crous, M. Shen & Y. Zhang ter
- Fraxinicola italica Crous, M. Shen & Y. Zhang ter
- Fraxinicola orni (M. Ibrahim et al.) Crous, M. Shen & Y. Zhang ter
- Fuscohil`um Crous, M. Shen & Y. Zhang ter
- Fuscohilum Crous, M. Shen & Y. Zhang ter
- Fuscohilum rhodensis (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter, Fuscohilum siciliana (Koukol) Crous, M. Shen & Y. Zhang ter
- Multigene analysis
- Neocoleroa cameroonensis Crous, M. Shen & Y. Zhang ter
- Neofusicladium Crous, M. Shen & Y. Zhang ter
- Neofusicladium eucalypti (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter
- Neofusicladium eucalypticola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter
- Neofusicladium regnans (Crous) Crous, M. Shen & Y. Zhang ter
- New taxa
- Niesslia iridicola (M.E. Barr) Crous, M. Shen & Y. Zhang ter
- Niesslia parasitica (Ellis & Everh.) M. Shen & Y. Zhang ter
- Niesslia vaccinii (Ellis & Everh.) Crous, M. Shen & Y. Zhang ter
- Parafusicladium Crous, M. Shen & Y. Zhang ter
- Parafusicladium amoenum (R.F. Castañeda & Dugan) Crous, M. Shen & Y. Zhang ter
- Parafusicladium intermedium (Crous & W.B. Kendr.) Crous, M. Shen & Y. Zhang ter
- Parafusicladium paraamoenum (Crous et al.) Crous, M. Shen & Y. Zhang ter
- Pinaceicola Crous, M. Shen & Y. Zhang ter
- Pinaceicola cordae (Koukol) Crous, M. Shen & Y. Zhang ter
- Pinaceicola pini(Crous & de Hoog) Crous, M. Shen & Y. Zhang ter
- Pseudosigmoidea excentrica (R.F. Castañeda et al.) Crous, M. Shen & Y. Zhang ter
- Scab disease
- Scolecobasidium aquaticum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium atlanticuum (A.M. Wellman) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium bacilliforme (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium capsici (Crous & Cheew.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium cordanae (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium dracaenae (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium globale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium icarus (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium macrozamiae (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium minimum (Fassat.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium musicola (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium olivaceum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium pandanicola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium phaeophorum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium podocarpi (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium ramosum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium robustum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium sexuale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium verrucosum (Zachariah et al.) Crous, M. Shen & Y. Zhang ter
- Sterila Crous, M. Shen & Y. Zhang ter
- Sterila eucalypti Crous, M. Shen & Y. Zhang ter
- Sympoventuria africana (Crous) Crous, M. Shen & Y. Zhang ter
- Systematics
- Tyrannosorus hanlinianus (U. Braun & Feiler) Crous, M. Shen & Y. Zhang ter
- Tyrannosorus hystrioides (Dugan et al.) Crous, M. Shen & Y. Zhang ter
- Tyrannosorus lichenicola Crous, M. Shen & Y. Zhang ter
- Tyrannosorus pini-sylvestris Crous & R.K. Schumach.
- Venturia
- Venturia albae Crous, M. Shen & Y. Zhang ter
- Venturia australiana Crous, M. Shen & Y. Zhang ter
- Venturia caesiae Crous, M. Shen & Y. Zhang ter
- Venturia finlandica Crous, M. Shen & Y. Zhang ter
- Venturia peltigericola (Crous & Diederich) Crous, M. Shen & Y. Zhang ter
- Venturia quebecensis Crous, M. Shen & Y. Zhang ter
- Verruconis terricola (J. Ren et al.) Crous, M. Shen & Y. Zhang ter
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Affiliation(s)
- M Shen
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - J Q Zhang
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - L L Zhao
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands
| | - P W Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands
| | - Y Zhang
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
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Li WJ, McKenzie EHC, Liu JK(J, Bhat DJ, Dai DQ, Camporesi E, Tian Q, Maharachchikumbura SSN, Luo ZL, Shang QJ, Zhang JF, Tangthirasunun N, Karunarathna SC, Xu JC, Hyde KD. Taxonomy and phylogeny of hyaline-spored coelomycetes. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00440-y] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Hyde KD, Dong Y, Phookamsak R, Jeewon R, Bhat DJ, Jones EBG, Liu NG, Abeywickrama PD, Mapook A, Wei D, Perera RH, Manawasinghe IS, Pem D, Bundhun D, Karunarathna A, Ekanayaka AH, Bao DF, Li J, Samarakoon MC, Chaiwan N, Lin CG, Phutthacharoen K, Zhang SN, Senanayake IC, Goonasekara ID, Thambugala KM, Phukhamsakda C, Tennakoon DS, Jiang HB, Yang J, Zeng M, Huanraluek N, Liu JK(J, Wijesinghe SN, Tian Q, Tibpromma S, Brahmanage RS, Boonmee S, Huang SK, Thiyagaraja V, Lu YZ, Jayawardena RS, Dong W, Yang EF, Singh SK, Singh SM, Rana S, Lad SS, Anand G, Devadatha B, Niranjan M, Sarma VV, Liimatainen K, Aguirre-Hudson B, Niskanen T, Overall A, Alvarenga RLM, Gibertoni TB, Pfliegler WP, Horváth E, Imre A, Alves AL, da Silva Santos AC, Tiago PV, Bulgakov TS, Wanasinghe DN, Bahkali AH, Doilom M, Elgorban AM, Maharachchikumbura SSN, Rajeshkumar KC, Haelewaters D, Mortimer PE, Zhao Q, Lumyong S, Xu J, Sheng J. Fungal diversity notes 1151–1276: taxonomic and phylogenetic contributions on genera and species of fungal taxa. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00439-5] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Abstract
Fungal diversity notes is one of the important journal series of fungal taxonomy that provide detailed descriptions and illustrations of new fungal taxa, as well as providing new information of fungal taxa worldwide. This article is the 11th contribution to the fungal diversity notes series, in which 126 taxa distributed in two phyla, six classes, 24 orders and 55 families are described and illustrated. Taxa in this study were mainly collected from Italy by Erio Camporesi and also collected from China, India and Thailand, as well as in some other European, North American and South American countries. Taxa described in the present study include two new families, 12 new genera, 82 new species, five new combinations and 25 new records on new hosts and new geographical distributions as well as sexual-asexual reports. The two new families are Eriomycetaceae (Dothideomycetes, family incertae sedis) and Fasciatisporaceae (Xylariales, Sordariomycetes). The twelve new genera comprise Bhagirathimyces (Phaeosphaeriaceae), Camporesiomyces (Tubeufiaceae), Eriocamporesia (Cryphonectriaceae), Eriomyces (Eriomycetaceae), Neomonodictys (Pleurotheciaceae), Paraloratospora (Phaeosphaeriaceae), Paramonodictys (Parabambusicolaceae), Pseudoconlarium (Diaporthomycetidae, genus incertae sedis), Pseudomurilentithecium (Lentitheciaceae), Setoapiospora (Muyocopronaceae), Srinivasanomyces (Vibrisseaceae) and Xenoanthostomella (Xylariales, genera incertae sedis). The 82 new species comprise Acremonium chiangraiense, Adustochaete nivea, Angustimassarina camporesii, Bhagirathimyces himalayensis, Brunneoclavispora camporesii, Camarosporidiella camporesii, Camporesiomyces mali, Camposporium appendiculatum, Camposporium multiseptatum, Camposporium septatum, Canalisporium aquaticium, Clonostachys eriocamporesiana, Clonostachys eriocamporesii, Colletotrichum hederiicola, Coniochaeta vineae, Conioscypha verrucosa, Cortinarius ainsworthii, Cortinarius aurae, Cortinarius britannicus, Cortinarius heatherae, Cortinarius scoticus, Cortinarius subsaniosus, Cytospora fusispora, Cytospora rosigena, Diaporthe camporesii, Diaporthe nigra, Diatrypella yunnanensis, Dictyosporium muriformis, Didymella camporesii, Diutina bernali, Diutina sipiczkii, Eriocamporesia aurantia, Eriomyces heveae, Ernakulamia tanakae, Falciformispora uttaraditensis, Fasciatispora cocoes, Foliophoma camporesii, Fuscostagonospora camporesii, Helvella subtinta, Kalmusia erioi, Keissleriella camporesiana, Keissleriella camporesii, Lanspora cylindrospora, Loratospora arezzoensis, Mariannaea atlantica, Melanographium phoenicis, Montagnula camporesii, Neodidymelliopsis camporesii, Neokalmusia kunmingensis, Neoleptosporella camporesiana, Neomonodictys muriformis, Neomyrmecridium guizhouense, Neosetophoma camporesii, Paraloratospora camporesii, Paramonodictys solitarius, Periconia palmicola, Plenodomus triseptatus, Pseudocamarosporium camporesii, Pseudocercospora maetaengensis, Pseudochaetosphaeronema kunmingense, Pseudoconlarium punctiforme, Pseudodactylaria camporesiana, Pseudomurilentithecium camporesii, Pseudotetraploa rajmachiensis, Pseudotruncatella camporesii, Rhexocercosporidium senecionis, Rhytidhysteron camporesii, Rhytidhysteron erioi, Septoriella camporesii, Setoapiospora thailandica, Srinivasanomyces kangrensis, Tetraploa dwibahubeeja, Tetraploa pseudoaristata, Tetraploa thrayabahubeeja, Torula camporesii, Tremateia camporesii, Tremateia lamiacearum, Uzbekistanica pruni, Verruconis mangrovei, Wilcoxina verruculosa, Xenoanthostomella chromolaenae and Xenodidymella camporesii. The five new combinations are Camporesiomyces patagoniensis, Camporesiomyces vaccinia, Camposporium lycopodiellae, Paraloratospora gahniae and Rhexocercosporidium microsporum. The 22 new records on host and geographical distribution comprise Arthrinium marii, Ascochyta medicaginicola, Ascochyta pisi, Astrocystis bambusicola, Camposporium pellucidum, Dendryphiella phitsanulokensis, Diaporthe foeniculina, Didymella macrostoma, Diplodia mutila, Diplodia seriata, Heterosphaeria patella, Hysterobrevium constrictum, Neodidymelliopsis ranunculi, Neovaginatispora fuckelii, Nothophoma quercina, Occultibambusa bambusae, Phaeosphaeria chinensis, Pseudopestalotiopsis theae, Pyxine berteriana, Tetraploa sasicola, Torula gaodangensis and Wojnowiciella dactylidis. In addition, the sexual morphs of Dissoconium eucalypti and Phaeosphaeriopsis pseudoagavacearum are reported from Laurus nobilis and Yucca gloriosa in Italy, respectively. The holomorph of Diaporthe cynaroidis is also reported for the first time.
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Li J, Jeewon R, Mortimer PE, Doilom M, Phookamsak R, Promputtha I. Multigene phylogeny and taxonomy of Dendryphion hydei and Torula hydei spp. nov. from herbaceous litter in northern Thailand. PLoS One 2020; 15:e0228067. [PMID: 32023268 PMCID: PMC7001993 DOI: 10.1371/journal.pone.0228067] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Accepted: 01/06/2020] [Indexed: 11/19/2022] Open
Abstract
During our studies on asexual fungi colonizing herbaceous litter in northern Thailand, we discovered two new fungal species, viz. Dendryphion hydei and Torula hydei spp. nov. The latter are examined, and their morphological characters are described as well as their DNA sequences from ribosomal and protein coding genes are analysed to infer their phylogenetic relationships with extant fungi. Torula hydei is different from other similar Torula species in having tiny and catenate conidia. Dendryphion hydei can be distinguished from other similar Dendryphion species in having large conidiophores and subhyaline to pale olivaceous brown, 2-4(-5)-septate conidia. Multigene phylogenetic analyses of a combined LSU, SSU, TEF1-α, RPB2 and ITS DNA sequence dataset generated from maximum likelihood and Bayesian inference analyses indicate that T. hydei forms a distinct lineage and basal to T. fici. Dendryphion hydei forms a distinct lineage and basal to D. europaeum, D. comosum, D. aquaticum and D. fluminicola within Torulaceae (Pleosporales, Dothideomycetes).
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Affiliation(s)
- Junfu Li
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Key Laboratory of Biodiversity and Biogeography, Chinese Academy of Sciences, Kunming Institute of Botany, Kunming, P.R. China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius
| | - Peter E. Mortimer
- Key Laboratory of Biodiversity and Biogeography, Chinese Academy of Sciences, Kunming Institute of Botany, Kunming, P.R. China
| | - Mingkwan Doilom
- Key Laboratory of Biodiversity and Biogeography, Chinese Academy of Sciences, Kunming Institute of Botany, Kunming, P.R. China
- World Agroforestry Centre, East and Central Asia, Kunming, P.R. China
| | - Rungtiwa Phookamsak
- Key Laboratory of Biodiversity and Biogeography, Chinese Academy of Sciences, Kunming Institute of Botany, Kunming, P.R. China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- World Agroforestry Centre, East and Central Asia, Kunming, P.R. China
| | - Itthayakorn Promputtha
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
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105
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Zheng H, Yang XQ, Deng JS, Xu JP, Yu ZF. Beltrania sinensis sp. nov., an endophytic fungus from China and a key to species of the genus. Int J Syst Evol Microbiol 2020; 70:1178-1185. [DOI: 10.1099/ijsem.0.003897] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Affiliation(s)
- Hua Zheng
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, PR China
| | - Xiao-Qian Yang
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, PR China
| | - Jing-Shi Deng
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, PR China
| | - Jian-Ping Xu
- Department of Biology, McMaster University, Hamilton, Ontario, L8S 4K1, Canada
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, PR China
| | - Ze-Fen Yu
- School of Life Science, Yunnan University, Kunming, 650032, PR China
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Tibpromma S, Mortimer PE, Karunarathna SC, Zhan F, Xu J, Promputtha I, Yan K. Morphology and Multi-Gene Phylogeny Reveal Pestalotiopsis pinicola sp. nov. and a New Host Record of Cladosporium anthropophilum from Edible Pine ( Pinus armandii) Seeds in Yunnan Province, China. Pathogens 2019; 8:E285. [PMID: 31817121 PMCID: PMC6963873 DOI: 10.3390/pathogens8040285] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Revised: 11/29/2019] [Accepted: 11/30/2019] [Indexed: 11/17/2022] Open
Abstract
This study contributes new knowledge on the diversity of conidial fungi in edible pine (Pinus armandii) seeds found in Yunnan Province, China and emphasizes the importance of edible seed products to ensure food safety standards. We isolated two fungal species, one on the pine seed coat and the other on the endosperm of the pine seed. The two fungal species were identified as Pestalotiopsis pinicola sp. nov. and a new host record Cladosporium anthropophilum. Characteristic morphological features of Pestalotiopsis pinicola were used alongside results from multi-gene phylogenetic analysis to distinguish it from currently known species within the genus. Cladosporium anthropophilum was identified as a new host record based on morphological features and phylogenetic analysis. In addition, detailed descriptions, scanned electron microscopy morphology, illustrations, and phylogenetic trees are provided to show the placement of these species.
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Affiliation(s)
- Saowaluck Tibpromma
- College of Resources and Environment, Yunnan Agricultural University, Kunming 650201, Yunnan, China; (S.T.); (F.Z.)
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China; (S.C.K.); (J.X.)
| | - Peter E. Mortimer
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China; (S.C.K.); (J.X.)
| | - Samantha C. Karunarathna
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China; (S.C.K.); (J.X.)
| | - Fangdong Zhan
- College of Resources and Environment, Yunnan Agricultural University, Kunming 650201, Yunnan, China; (S.T.); (F.Z.)
| | - Jianchu Xu
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China; (S.C.K.); (J.X.)
| | - Itthayakorn Promputtha
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand;
- Center of Excellence in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, Muang District, Chiang Mai 50200, Thailand
| | - Kai Yan
- College of Resources and Environment, Yunnan Agricultural University, Kunming 650201, Yunnan, China; (S.T.); (F.Z.)
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China; (S.C.K.); (J.X.)
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de Silva NI, Phillips AJL, Liu JK, Lumyong S, Hyde KD. Phylogeny and morphology of Lasiodiplodia species associated with Magnolia forest plants. Sci Rep 2019; 9:14355. [PMID: 31586104 PMCID: PMC6778208 DOI: 10.1038/s41598-019-50804-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2019] [Accepted: 09/17/2019] [Indexed: 11/24/2022] Open
Abstract
Two new species of Lasiodiplodia (Lasiodiplodia endophytica and Lasiodiplodia magnoliae) are described and illustrated from Magnolia forests in Yunnan, China. Endophytic and saprobic Lasiodiplodia pseudotheobromae and endophytic L. thailandica are new records from this host. The internal transcribed spacers (ITS), part of the translation elongation factor-1α (tef1) and partial β-tubulin (tub2) sequence data were analyzed to investigate the phylogenetic relationships of the new species with other Lasiodiplodia species. Lasiodiplodia magnoliae is phylogenetically sister to L. mahajangana and L. pandanicola but morphologically distinct from L. mahajangana in having larger conidia. Lasiodiplodia endophytica is most closely related to L. iraniensis and L. thailandica and the three species can be distinguished from one another by 2 base pair differences in ITS and three or four base pair differences in tef1. The new collections suggest that Magnolia forest plants are good hosts for Lasiodiplodia species with endophytic and saprobic life-styles.
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Affiliation(s)
- Nimali I de Silva
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.,Biodiversity and Ethnobiology, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.,Center of Excellence in Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.,Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201, P.R. China.,Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.,World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming, 650201, P.R. China
| | - Alan J L Phillips
- Universidade de Lisboa, Faculdade de Ciências, Biosystems and Integrative Sciences Institute (BioISI), Campo Grande, 1749- 016, Lisbon, Portugal
| | - Jian-Kui Liu
- School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 611731, P.R. China
| | - Saisamorn Lumyong
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. .,Center of Excellence in Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. .,Academy of Science, the Royal Society of Thailand, Bangkok, 10300, Thailand.
| | - Kevin D Hyde
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.,Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201, P.R. China.,Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.,World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming, 650201, P.R. China
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Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00429-2] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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111
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Dayarathne MC, Maharachchikumbura SSN, Jones EBG, Dong W, Devadatha B, Yang J, Ekanayaka AH, De Silva W, Sarma VV, Al-Sadi AM, Khongphinitbunjong K, Hyde KD, Zhao RL. Phylogenetic Revision of Savoryellaceae and Evidence for Its Ranking as a Subclass. Front Microbiol 2019; 10:840. [PMID: 31133992 PMCID: PMC6514050 DOI: 10.3389/fmicb.2019.00840] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Accepted: 04/02/2019] [Indexed: 01/17/2023] Open
Abstract
Morphology, phylogeny, and molecular clock analyses were carried out on Savoryellaceae in order to understand the placements of taxa in this family. Ascotaiwania and Neoascotaiwania formed a well-supported separate clade in the phylogeny of concatenated partial SSU, LSU, TEF, and RPB2 gene data. These two genera share similar morphological features, especially in their asexual morphs, indicating that they are congeneric. Hence, we synonymize Neoascotaiwania under Ascotaiwania. Ascotaiwania hughesii (and its asexual morph, Helicoon farinosum) and Monotosporella setosa grouped in a clade sister to Pleurotheciales and are excluded from Ascotaiwania which becomes monophyletic. A novel genus Helicoascotaiwania is introduced to accommodate Ascotaiwania hughesii and its asexual morph, Helicoon farinosum. A novel species, Savoryella yunnanensis is introduced from a freshwater habitat in Yunnan Province, China. Comprehensive descriptions and illustrations are provided for selected taxa in this family. In addition, we provide evolutionary divergence estimates for Savoryellomycetidae taxa and major marine based taxa to support our phylogenetic and morphological investigations. The taxonomic placement of these marine-based taxa is briefly discussed. Our results indicate that the most basal group of marine-based taxa are represented within Lulworthiales, which diverged from ancestral Sordariomycetes around 149 Mya (91-209) and Savoryellomycetidae around 213 Mya (198-303).
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Affiliation(s)
- Monika C Dayarathne
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand.,World Agroforestry Centre East and Central Asia Office, Kunming, China.,Key Laboratory for Plant Biodiversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China.,Department of Botany and Microbiology, College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | | | - E B Gareth Jones
- Department of Botany and Microbiology, College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Wei Dong
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand.,World Agroforestry Centre East and Central Asia Office, Kunming, China
| | - Bandarupalli Devadatha
- Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, India
| | - Jing Yang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Anusha H Ekanayaka
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Wasana De Silva
- Donghu Experimental Station of Lake Ecosystems, State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China
| | - Vemuri V Sarma
- Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, India
| | - Abdullah M Al-Sadi
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Muscat, Oman
| | | | - Kevin D Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand.,World Agroforestry Centre East and Central Asia Office, Kunming, China.,Key Laboratory for Plant Biodiversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Rui Lin Zhao
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.,College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
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Phookamsak R, Hyde KD, Jeewon R, Bhat DJ, Jones EBG, Maharachchikumbura SSN, Raspé O, Karunarathna SC, Wanasinghe DN, Hongsanan S, Doilom M, Tennakoon DS, Machado AR, Firmino AL, Ghosh A, Karunarathna A, Mešić A, Dutta AK, Thongbai B, Devadatha B, Norphanphoun C, Senwanna C, Wei D, Pem D, Ackah FK, Wang GN, Jiang HB, Madrid H, Lee HB, Goonasekara ID, Manawasinghe IS, Kušan I, Cano J, Gené J, Li J, Das K, Acharya K, Raj KNA, Latha KPD, Chethana KWT, He MQ, Dueñas M, Jadan M, Martín MP, Samarakoon MC, Dayarathne MC, Raza M, Park MS, Telleria MT, Chaiwan N, Matočec N, de Silva NI, Pereira OL, Singh PN, Manimohan P, Uniyal P, Shang QJ, Bhatt RP, Perera RH, Alvarenga RLM, Nogal-Prata S, Singh SK, Vadthanarat S, Oh SY, Huang SK, Rana S, Konta S, Paloi S, Jayasiri SC, Jeon SJ, Mehmood T, Gibertoni TB, Nguyen TTT, Singh U, Thiyagaraja V, Sarma VV, Dong W, Yu XD, Lu YZ, Lim YW, Chen Y, Tkalčec Z, Zhang ZF, Luo ZL, Daranagama DA, Thambugala KM, Tibpromma S, Camporesi E, Bulgakov TS, Dissanayake AJ, Senanayake IC, Dai DQ, Tang LZ, Khan S, Zhang H, Promputtha I, Cai L, Chomnunti P, Zhao RL, Lumyong S, Boonmee S, Wen TC, Mortimer PE, Xu J. Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00421-w] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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113
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Hyde KD, Norphanphoun C, Chen J, Dissanayake AJ, Doilom M, Hongsanan S, Jayawardena RS, Jeewon R, Perera RH, Thongbai B, Wanasinghe DN, Wisitrassameewong K, Tibpromma S, Stadler M. Thailand’s amazing diversity: up to 96% of fungi in northern Thailand may be novel. FUNGAL DIVERS 2018. [DOI: 10.1007/s13225-018-0415-7] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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