101
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Vogiatzis KD, Polynski MV, Kirkland JK, Townsend J, Hashemi A, Liu C, Pidko EA. Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities. Chem Rev 2019; 119:2453-2523. [PMID: 30376310 PMCID: PMC6396130 DOI: 10.1021/acs.chemrev.8b00361] [Citation(s) in RCA: 222] [Impact Index Per Article: 44.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Indexed: 12/28/2022]
Abstract
Computational chemistry provides a versatile toolbox for studying mechanistic details of catalytic reactions and holds promise to deliver practical strategies to enable the rational in silico catalyst design. The versatile reactivity and nontrivial electronic structure effects, common for systems based on 3d transition metals, introduce additional complexity that may represent a particular challenge to the standard computational strategies. In this review, we discuss the challenges and capabilities of modern electronic structure methods for studying the reaction mechanisms promoted by 3d transition metal molecular catalysts. Particular focus will be placed on the ways of addressing the multiconfigurational problem in electronic structure calculations and the role of expert bias in the practical utilization of the available methods. The development of density functionals designed to address transition metals is also discussed. Special emphasis is placed on the methods that account for solvation effects and the multicomponent nature of practical catalytic systems. This is followed by an overview of recent computational studies addressing the mechanistic complexity of catalytic processes by molecular catalysts based on 3d metals. Cases that involve noninnocent ligands, multicomponent reaction systems, metal-ligand and metal-metal cooperativity, as well as modeling complex catalytic systems such as metal-organic frameworks are presented. Conventionally, computational studies on catalytic mechanisms are heavily dependent on the chemical intuition and expert input of the researcher. Recent developments in advanced automated methods for reaction path analysis hold promise for eliminating such human-bias from computational catalysis studies. A brief overview of these approaches is presented in the final section of the review. The paper is closed with general concluding remarks.
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Affiliation(s)
| | | | - Justin K. Kirkland
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Jacob Townsend
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Ali Hashemi
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Chong Liu
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Evgeny A. Pidko
- TheoMAT
group, ITMO University, Lomonosova 9, St. Petersburg 191002, Russia
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
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102
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Kaledin AL, Troya D, Karwacki CJ, Balboa A, Gordon WO, Morris JR, Mitchell MB, Frenkel AI, Hill CL, Musaev DG. Key mechanistic details of paraoxon decomposition by polyoxometalates: Critical role of para-nitro substitution. Chem Phys 2019. [DOI: 10.1016/j.chemphys.2018.11.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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103
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Yang D, Gates BC. Catalysis by Metal Organic Frameworks: Perspective and Suggestions for Future Research. ACS Catal 2019. [DOI: 10.1021/acscatal.8b04515] [Citation(s) in RCA: 416] [Impact Index Per Article: 83.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Dong Yang
- Department of Chemical Engineering, University of California, Davis, California 95616, United States
| | - Bruce C. Gates
- Department of Chemical Engineering, University of California, Davis, California 95616, United States
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104
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Zhang Z, Xiao Y, Cui M, Tang J, Fei Z, Liu Q, Chen X, Qiao X. Modulating the basicity of Zn-MOF-74 via cation exchange with calcium ions. Dalton Trans 2019; 48:14971-14974. [DOI: 10.1039/c9dt03332g] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The fine-tuning of MBBs in Zn-MOF-74 through post-synthetic cation exchange with Ca2+ significantly enhances its basicity. The resulting Ca/Zn-MOF-74 gives an improved product yield over Zn-MOF-74 and Ni/Zn-MOF-74 in Knoevenagel condensation.
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Affiliation(s)
- Zhuxiu Zhang
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Yue Xiao
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Mifen Cui
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Jihai Tang
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Zhaoyang Fei
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Qing Liu
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Xian Chen
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
| | - Xu Qiao
- State Key Laboratory of Materials-Oriented Chemical Engineering
- College of Chemical Engineering
- Nanjing Tech University
- Nanjing 211816
- China
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105
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Selective fluorescent sensing and photodegradation properties of Tb(III)-based MOFs with different bulky backbone ligands. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.09.066] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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106
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Yuan J, Li J, Che S, Li G, Liu X, Sun X, Zou L, Zhang L, Liu Y. Two unique copper cluster-based metal–organic frameworks with high performance for CO2 adsorption and separation. Inorg Chem Front 2019. [DOI: 10.1039/c8qi01315b] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two unique Cu cluster-based MOFs have been constructed. Compound 1 with high-density OMSs and LBSs exhibits high CO2 separation ability.
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Affiliation(s)
- Jiaqi Yuan
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Jiantang Li
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Songtian Che
- Department of Ocular Fundus Disease of the Second Clinical Hospital
- Jilin University
- Changchun 130022
- P. R. China
| | - Guanghua Li
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Xinyao Liu
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Xiaodong Sun
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Lifei Zou
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Lirong Zhang
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
| | - Yunling Liu
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- College of Chemistry
- Jilin University
- Changchun 130012
- P. R. China
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107
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Anderson R, Gómez-Gualdrón DA. Increasing topological diversity during computational “synthesis” of porous crystals: how and why. CrystEngComm 2019. [DOI: 10.1039/c8ce01637b] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Effectively tuning the properties of porous crystals could lead to breakthroughs in areas such as molecular separation, chemical sensing, and catalysis.
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Affiliation(s)
- Ryther Anderson
- Department of Chemical and
- Biological Engineering
- Colorado School of Mines
- Golden
- USA
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108
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Tan C, Han X, Li Z, Liu Y, Cui Y. Controlled Exchange of Achiral Linkers with Chiral Linkers in Zr-Based UiO-68 Metal–Organic Framework. J Am Chem Soc 2018; 140:16229-16236. [DOI: 10.1021/jacs.8b09606] [Citation(s) in RCA: 103] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Chunxia Tan
- School of Chemistry and Chemical Engineering and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xing Han
- School of Chemistry and Chemical Engineering and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Zijian Li
- School of Chemistry and Chemical Engineering and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yan Liu
- School of Chemistry and Chemical Engineering and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yong Cui
- School of Chemistry and Chemical Engineering and State Key Laboratory of Metal Matrix Composites, Shanghai Jiao Tong University, Shanghai 200240, China
- Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300072, China
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109
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Wang JJ, Chen Y, Liu MJ, Fan RY, Si PP, Yang J, Pan YY, Chen Y, Zhao SS, Xu J. Yb(III)-based MOFs with different bulky backbone ligands for optical detection and degradation of organic molecules in wastewater. Polyhedron 2018. [DOI: 10.1016/j.poly.2018.08.041] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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110
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Islamoglu T, Ray D, Li P, Majewski MB, Akpinar I, Zhang X, Cramer CJ, Gagliardi L, Farha OK. From Transition Metals to Lanthanides to Actinides: Metal-Mediated Tuning of Electronic Properties of Isostructural Metal–Organic Frameworks. Inorg Chem 2018; 57:13246-13251. [DOI: 10.1021/acs.inorgchem.8b01748] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Timur Islamoglu
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Debmalya Ray
- Department of Chemistry, Chemical Theory Center and Minnesota Supercomputing Institute, University of Minnesota, 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Peng Li
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Marek B. Majewski
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Isil Akpinar
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Xuan Zhang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Christopher J. Cramer
- Department of Chemistry, Chemical Theory Center and Minnesota Supercomputing Institute, University of Minnesota, 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Laura Gagliardi
- Department of Chemistry, Chemical Theory Center and Minnesota Supercomputing Institute, University of Minnesota, 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Omar K. Farha
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
- Department of Chemistry, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia
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111
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Wang JJ, Zhang DJ, Cao YL, Li XR, Wang YR, Li YA, Tian LL, Hu TL. Selective fluorescent sensing and photocatalytic properties of Zinc(II) and Cadmium(II) coordination architectures with naphthalene-1,5-disulfonate and 2,4,5-tri(4-pyridyl)-imidazole. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.06.042] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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112
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Ji P, Drake T, Murakami A, Oliveres P, Skone JH, Lin W. Tuning Lewis Acidity of Metal–Organic Frameworks via Perfluorination of Bridging Ligands: Spectroscopic, Theoretical, and Catalytic Studies. J Am Chem Soc 2018; 140:10553-10561. [DOI: 10.1021/jacs.8b05765] [Citation(s) in RCA: 92] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Pengfei Ji
- Department of Chemistry, The University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States
| | - Tasha Drake
- Department of Chemistry, The University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States
| | - Akiko Murakami
- Department of Chemistry, The University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States
| | - Pau Oliveres
- Department of Chemistry, The University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States
| | - Jonathan H. Skone
- Research Computing Center, The University of Chicago, 5607 South Drexel Avenue, Chicago, Illinois 60637, United States
| | - Wenbin Lin
- Department of Chemistry, The University of Chicago, 929 East 57th Street, Chicago, Illinois 60637, United States
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113
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Zhao ZW, Zhou X, Liu YN, Shen CC, Yuan CZ, Jiang YF, Zhao SJ, Ma LB, Cheang TY, Xu AW. Ultrasmall Ni nanoparticles embedded in Zr-based MOFs provide high selectivity for CO2 hydrogenation to methane at low temperatures. Catal Sci Technol 2018. [DOI: 10.1039/c8cy00468d] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Highly monodisperse Ni NPs in UiO-66 give both excellent activity and selectivity for CO2 methanation at low temperatures.
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114
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Wang JJ, Zhang YJ, Chen Y, Si PP, Pan YY, Yang J, Fan RY, Li ZY. Three new Zn-based metal–organic frameworks exhibiting selective fluorescence sensing and photocatalytic activity. CrystEngComm 2018. [DOI: 10.1039/c8ce00598b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three MOFs with different 2D networks have been crystallised in a one-pot solvothermal reaction. They all display high sensitivity in the detection of ACE and relatively good photocatalytic activity in the degradation of RhB.
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Affiliation(s)
- Jun-Jie Wang
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - You-Juan Zhang
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Yan Chen
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Pan-Pan Si
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Ya-Ya Pan
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Jie Yang
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Rui-Yang Fan
- School of Chemistry and Chemical Engineering, and Henan Province Key Laboratory of New Opto-Electronic Functional Materials
- Anyang Normal University
- Anyang 455000
- China
| | - Zhao-Yang Li
- School of Materials Science and Engineering
- Nankai University
- Tianjin 300350
- China
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