Anion Recognition Based on a Combination of Double-Dentate Hydrogen Bond and Double-Side Anion-π Noncovalent Interactions

Anion recognitions between common anions and a novel pincer-like receptor (N,N'-bis(5-fluorobenzoyloxyethyl)urea, BFUR) were theoretically explored, particularly on geometric features of the BFUR@X (X = F^-, Cl^-, Br^-, I^-, CO₃^2-, NO₃^-, and SO₄^2-) systems at a molecular level in this work. Complex structures show that two N-H groups as a claw and two -C₆F₅ rings on BFUR as a pair of tweezers simultaneously interact with captured anions through cooperative double-dentate hydrogen bond and double-side anion-π interactions. The binding energies and thermodynamic information indicate that the recognitions of the seven anions by BFUR in vacuum are enthalpy-driven and entropy-opposed, which occur spontaneously. Although the binding energy ΔE_cp between F^- and BFUR is relatively high (289.30 kJ·mol^-1), ΔE_cp, ΔG, and ΔH of the recognition for CO₃^2- and SO₄^2- are much larger than the cases of F^-, Cl^-, Br^-, I^-, and NO₃^-, suggesting that BFUR is an ideal selective anion receptor for CO₃^2- and SO₄^2-. Additionally, energy decomposition analysis based on localized molecular orbital energy decomposition analysis (LMO-EDA) was performed; electronic properties and behaviors of the present systems were further discussed according to calculations on frontier molecular orbital, UV-vis spectra, total electrostatic potential, and visualized weak interaction regions. The present theoretical exploration of BFUR@X (X = F^-, Cl^-, Br^-, I^-, CO₃^2-, NO₃^-, and SO₄^2-) systems is fundamentally crucial to establish an anion recognition structure-property relationship upon combination of different noncovalent interactions, that is, double-dentate hydrogen bond and double-side anion-π interactions.

A multi writable thiophene-based selective and reversible chromogenic fluoride probe with dual -NH functionality

A chromogenic fluoride probe bearing bis imine groups having dual -NH functionality (BSB) has been designed, synthesised and structurally characterized by its single crystal X-ray diffraction studies. The BSB could visually and spectroscopically recognise F(-) with high selectivity over other anions by exhibiting intense chromogenic response (from colourless to red) for F(-) in acetonitrile solution. The UV-visible titration and (1)H NMR titration experiments indicated that the observed changes occur via a combined process including hydrogen bonding and deprotonation between the BSB and F(-). Moreover theoretical calculations at the Density Functional Theory (DFT) level shed further light upon probe design strategy and the nature of interactions between BSB and F(-). The limit of detection and binding constant of BSB towards F(-) were found to be 6.9×10(-7)M and 1.42±0.069×10(8)M(-2) respectively. Finally, by using F(-)and H(+) as chemical inputs and the absorbance as output, a INHIBIT logic gate was constructed, which exhibits "Multi-write" ability without obvious degradation in its optical output.

Design and synthesis of a new organic receptor and evaluation of colorimetric anion sensing ability in organo-aqueous medium

A new organic receptor has been designed and synthesized by the combination of aromatic dialdehyde with nitro-substituted aminophenol resulting in a Schiff base compound. The receptor exhibited a colorimetric response for F(-) and AcO(-) ion with a distinct color change from pale yellow to red and pink respectively in dry DMSO solvent and yellow to pale greenish yellow in DMSO:H2O (9:1, v/v). UV-Vis titration studies displayed a significant shift in absorption maxima in comparison with the free receptor. The shift could be attributed to the hydrogen bonding interactions between the active anions and the hydroxyl functionality aided by the electron withdrawing nitro substituent on the receptor. (1)H NMR titration and density functionality studies have been performed to understand the nature of interaction of receptor and anions. The lower detection limit of 1.12ppm was obtained in organic media for F(-) ion confirming the real time application of the receptor.

A novel water soluble chemosensor based on carboxyl functionalized NDI derivatives for selective detection and facile removal of mercury(ii)

A novel water-soluble Hg²⁺ sensor M2 has been designed and synthesized, which can provide a fluorescent “turn-on” response when it detects Hg²⁺. More meaningfully, the sensor M2 can remove Hg²⁺ from water effectively.

Pyridoxal conjugated gold nanoparticles for distinct colorimetric detection of chromium(iii) and iodide ions in biological and environmental fluids

We developed pyridoxal conjugated gold nanoparticles (CAPy-AuNPs) for the selective colorimetric detection of Cr³⁺ and iodide ions in an aqueous medium.

A novel iodination-triggered competitive coordination mechanism: indirect detection of Hg2+and I−using a simple copillar[5]arene-based fluorometric sensor

Proposed mechanism for the detection of Hg²⁺and I⁻byDBP5.

Anion binding consistency by influence of aromatic meta-disubstitution of a simple urea receptor: regular entrapment of hydrated halide and oxyanion clusters

Consistent recognition of asymmetric divalent sulphate, hydrated chloride and acetate along with fluoride induced bicarbonate within self-assembly of bis-urea receptor is observed.

An aryl-triazole foldamer containing a 1,8-naphthalimide fluorescent motif for monitoring and enhancing the anion-induced folding

A 1,8-naphthalimide fluorescent motif was found to facilitate folding and to largely enhance halogen anion binding for an aryl-triazole foldamer.

Efficient and selective separation of aqueous sulfate through recognition and precipitation

Sulfate anions are selectively separated from aqueous solution in the form of precipitates by a mono-protonated organic receptor, constructed in situ through anion-templated chemical synthesis.

Mercaptooxazole–phenazine based blue fluorescent sensor for the ultra-sensitive detection of mercury(ii) ions in aqueous solution

Herein, a fluorescent sensor based on the mechanism of the deprotonation process was designed and synthesized, which could detect Hg²⁺ in aqueous solution with remarkable fluorescence color changed (from yellow to light blue).

Systematic size mediated trapping of anions of varied dimensionality within a dimeric capsular assembly of a flexible neutral bis-urea platform

The systematic and consistent size mediated recognition of spherical, planar and tetrahedral anions is observed within a neutral cation-sealed dimeric capsular assembly of a meta-difunctionalized organic bis-urea receptor in solid and solution states.

Rational Design of Azo-Azomethine Receptors for Sensing of Inorganic Fluoride: Construction of Molecular Logic Gates and DFT Study

New azo-azomethine receptors, HLn (n = 1–3), have been synthesised via condensation reaction of 5-(4-X-phenyl)-azo-salicylaldehyde (X = NO2, Cl and CH3) with (4-nitrobenzylidene)hydrazine. The receptor with a p-NO2 substituent on the aromatic ring of the azo moiety (HL1) has excellent sensitivity and selectivity towards basic anions with proper discrimination between F− and AcO− or H2PO4− in DMSO–water (4 : 1). A Job’s plot displays a 1 : 1 stoichiometry between HL1 and F− alone with a detection limit of 0.737 μM for fluoride ions. The solvatochromic behaviour of HL1 was probed by studying its UV-vis spectra in four pure organic solvents of different polarities and a meaningful correlation was observed. Furthermore, HL1 was used for detection of inorganic fluoride in toothpaste. The systematic density functional theory (DFT) and time dependent-DFT calculations have been carried out to investigate the mechanism of colourimetric sensing of fluoride ion by HL1 in the gas phase and in solution. Moreover, by using F− and H+ as chemical inputs, and the absorbance as output, a INHIBIT logic gate was constructed, which exhibits ‘Write–Read–Erase–Read’ ability without obvious degradation in its optical output.

Fluorescent benzimidazo[1,2-a]quinolines: synthesis, spectroscopic and computational studies of protonation equilibria and metal ion sensitivity

Novel benzimidazo[1,2-a]quinolines with promising pH and chemosensing properties are experimentally and computationally characterized.

Novel supramolecular sensors constructed from pillar[5]arene and a naphthalimide for efficient detection of Fe3+ and F− in water

Novel water soluble supramolecular sensors for efficient detection of Fe³⁺ and F⁻ were constructed by assembling a novel naphthalimide and pillar[5]arene.

A benzimidazole functionalized NDI derivative for recyclable fluorescent detection of cyanide in water

An NDI-based chemosensor (L2) was synthesized via a one step reaction; L2 showed recyclable CN⁻ detection properties in water.

Synthesis and anion binding properties of porphyrins and related compounds

Over the last two decades the preparation of pyrrole-based receptors for anion recognition has attracted considerable attention. In this regard porphyrins, phthalocyanines and expanded porphyrins have been used as strong and selective receptors while the combination of those with different techniques and materials can boost their applicability in different applications as chemosensors and extracting systems. Improvements in the field, including the synthesis of this kind of compounds, can contribute to the development of efficient, cheap, and easy-to-prepare anion receptors. Extensive efforts have been made to improve the affinity and selectivity of these compounds and the continuous expansion of related research makes this chemistry even more promising. In this review, we summarize the most recent developments in anion binding studies while outlining the strategies that may be used to synthesize and functionalize these type of macrocycles.

Anion Complexes with Tetrazine-Based Ligands: Formation of Strong Anion-π Interactions in Solution and in the Solid State

Ligands L1 and L2, consisting of a tetrazine ring decorated with two morpholine pendants of different lengths, show peculiar anion-binding behaviors. In several cases, even the neutral ligands, in addition to their protonated HL(+) and H2L(2+) (L = L1 and L2) forms, bind anions such as F(-), NO3(-), PF6(-), ClO4(-), and SO4(2-) to form stable complexes in water. The crystal structures of H2L1(PF6)2·2H2O, H2L1(ClO4)2·2H2O, H2L2(NO3)2, H2L2(PF6)2·H2O, and H2L2(ClO4)2·H2O show that anion-π interactions are pivotal for the formation of these complexes, although other weak forces may contribute to their stability. Complex stability constants were determined by means of potentiometric titration in aqueous solution at 298.1 K, while dissection of the free-energy change of association (ΔG°) into its enthalpic (ΔH°) and entropic (TΔS°) components was accomplished by means of isothermal titration calorimetry measurements. Stability constants are poorly regulated by anion-ligand charge-charge attraction. Thermodynamic data show that the formation of complexes with neutral ligands, which are principally stabilized by anion-π interactions, is enthalpically favorable (-ΔG°, 11.1-17.5 kJ/mol; ΔH°, -2.3 to -0.5 kJ/mol; TΔS°, 9.0-17.0 kJ/mol), while for charged ligands, enthalpy changes are mostly unfavorable. Complexation reactions are invariably promoted by large and favorable entropic contributions. The importance of desolvation phenomena manifested by such thermodynamic data was confirmed by the hydrodynamic results obtained by means of diffusion NMR spectroscopy. In the case of L2, complexation equilibria were also studied in a 80:20 (v/v) water/ethanol mixture. In this mixed solvent of lower dielectric constant than water, the stability of anion complexes decreases, relative to water. Solvation effects, mostly involving the ligand, are thought to be responsible for this peculiar behavior.

Synthesis, structure, magnetic and biological activity studies of bis-hydrazone derived Cu(ii) and Co(ii) coordination compounds

Four coordination compounds of formulae [Cu(II)2(H2L(1))(HL(1))](ClO4)3·H2O (1), [Cu(II)2(H2L(2))(CH3OH)2](ClO4)2·2CH3OH (2), [Co(II)2(H2L(1))2](ClO4)4 (3) and [Co(II)2(H2L(2))2]·2H2O (4) were synthesized via self-assembly of succinohydrazone derived ligands (H2L(1) = N',N'-4-bis(2-pyridyl)succinohydrazide, H4L(2) = N',N'-4-bis(2-hydroxybenzylidene)succinohydrazide) and Cu(2+) and Co(2+) ions, respectively. The compounds were characterized by crystal structure determination, magnetic measurements and biological activities. Compounds 1, 3 and 4 have discrete double helicate structures, whereas compound 2 is a one-dimensional chain. Magnetic studies show antiferromagnetic exchange interactions in 2 with a J value of -67.1 cm(-1) and antiferromagnetic spin-canting in compound 3 originates through supramolecular H-bonding. For compound 3, a clear bifurcation was observed in zero field cooled (ZFC) and field cooled (FC) measurement at a temperature of 3.5 K and field of 0.1 T, implying long range magnetic ordering below this temperature. Interestingly, all of compounds 1-4 show significant changes in their absorption (hypo- and hyperchromism) in the presence of SS-DNA, inferring interaction between the compounds and DNA. In addition, compounds 1-4 significantly exhibited nuclease activities on both RNA and pUC19 plasmid DNA. Moreover, the nuclease activity was further enhanced in the presence of oxidant (H2O2) and suggests the possible role of reactive oxygen species in DNA nicking ability of compounds 1-4. Furthermore, compounds 1, 2 and 4 exhibited significant cytotoxicity against mammalian cancer cell lines (HeLa, A549 and MDAMB-231). In addition, our results from Annexin/PI staining and DNA fragmentation assays revealed that these compounds are capable of inducing apoptosis and have potential to act as anticancer drugs.

Cooperative binding and extraction of sodium nitrite by a ditopic receptor incorporated into a polymeric resin

Simple ion pair receptors were synthesised and characterized in solution. The modular design of these receptors facilitated the preparation of a functionally analogous polymeric material able to extract sodium nitrite from acetonitrile solution.

Post-synthetic modification of a macrocyclic receptor via regioselective imidazolium ring-opening

A facile post-synthetic modification of a tetracationic tetraimidazolium macrocycle, 14+ (i.e., the "Texas-sized" molecular box (cyclo[2](2,6-di(1H-imidazol-1-yl)pyridine)[2](1,4-dimethylenebenzene)), is described. Under mild basic conditions, ring-opening of the imidazolium moieties occurs. This results in two new isomeric dicationic macrocycles. This simple yet efficient modification serves to alter the size of the molecular cavity, the charge of the macromolecular receptor, and the manner whereby it interacts with dianionic guest molecules. The isomeric mixture of imidazolium ring opened macrocycles can be synthesized in relatively high overall yield (86-93%). The reaction shows regioselectivity and the ratio of major to minor (i.e., trans : cis ring-opened products) was determined to be ca. 3 : 1 via1H NMR spectroscopy. The major isomer, trans-cyclo[2]((Z)-N-(2-((6-(1H-imidazol-1-yl)pyridin-2-yl)amino)vinyl)formamide)[2](1,4-bismethylbenzene) hexafluorophosphate (22+·2PF6-), was isolated in its pure form in 42% yield via recrystallization. The molecular recognition properties of 22+ were investigated using a series of dianionic guests (i.e., 2,6-naphthalenedicarboxylate (4), 2,6-naphthalenedisulfonate (5), and 1,5-naphthalenedisulfonate (6)) whose binding interactions with 14+ have been previously reported. This allowed us to evaluate how imidazolium ring-opening affects the inherent host/guest interactions of 14+. On the basis of solution spectroscopic studies (e.g., 1H NMR, 1H-1H COSY NMR, DOSY NMR, and NOESY NMR), in tandem with mass spectrometric analyses (ESI-MS) and single-crystal X-ray diffraction studies, we conclude that opening up the macrocyclic structure (i.e., converting 14+ to 22+) leads to considerable changes in the recognition behavior, with so-called outside binding or weak ion pair interactions, rather than pseudorotaxane formation, being favored both in solution and the solid-state. We postulate that methodologies such as those described herein could provide a means to control the molecular interactions of both free-standing macrocycles and those used to construct mechanically-interlocked molecules. Indeed, the application of hydroxide anion under the present conditions not only serves to effect the ring-opening of 14+, but also pseudorotaxane structures, such as, e.g., [14+·4] or [14+·5] derived there from.

Rationally introduce multi-competitive binding interactions in supramolecular gels: a simple and efficient approach to develop multi-analyte sensor array

A supramolecular-gel-based twenty-two-member sensor array has been created by introducing well-designed multi-competitive binding interactions into a supramolecular gel.

Sensor arrays are a powerful tool for multianalyte sensing and the development of an efficient sensor array has become one of the most intriguing problems. However, sensor arrays often employ lots of receptors which need large amounts of work to synthesise. This study describes an efficient method for the fabrication of a simple sensor array based on the competitive binding in supramolecular gels. By rationally introducing various well-designed competitive binding interactions into the supramolecular gel, which is self-assembled from a naphthylhydrazone-based organogelator, a supramolecular gel-based twenty-two-member sensor array has been created. Interestingly, the sensor array has been shown to accurately identify fourteen kinds of important ions (F^–, Cl^–, I^–, CN^–, HSO₄^–, SCN^–, S^2–, OH^–, Al³⁺, Fe³⁺, Zn²⁺, Hg²⁺, Pb²⁺ and H⁺) in water. It's important to note that this sensor array needs only one synthesized receptor. Moreover, using this method, we also obtained a series of ion response fluorescent supramolecular materials, which could act as security display materials. Therefore, it's a novel and facile way for the design of a simple sensor array as well as ion response fluorescent supramolecular materials.

Photomodulation of fluoride ion binding through anion-π interactions using a photoswitchable azobenzene system

The discovery of photoswitchable azobenzene-systems that undergo trans-to-cis photoisomerisation was a milestone in supramolecular chemistry. Such photoswitches have possible applications in data storage, stimuli responsive delivery systems, and molecular machines due to fast and selective switching. However, the light induced cis isomer of azobenzene is rather unstable and reverts thermally and photochemically to the thermodynamically stable trans configuration. We report, for the first time, controlled photoswitching of an azo-naphthalenediimide (azo-NDI) which can be achieved upon binding of fluoride ions through anion-π interaction. This NDI-F-NDI "sandwich" stabilises the cis configuration through the generation of an NDI(•-) radical anion, and a dianionic, NDI(2-) species that becomes unusually stable in the cis form. The sandwiched cis form reverts to the trans form only upon decomplexation of F(-). A model pollutant was successfully degraded using the photogenerated NDI-F-NDI sandwich. This opens a wide range of applications in molecular and supramolecular nanotechnology.

Ruthenium(II) Complexes of Aryl Triazole Foldamers as Receptors for Anions

Ruthenium(II) complexes of oligo(bipyridine-phenyl triazole)s were synthesized as receptors for anions. The receptors, which are partially preorganized through metal-ligand interactions, can fold into a helical conformation to bind chloride, bromide, iodide, or nitrate anions in their inner cavities in acetone or competitive H-bonding media such as 5% water in acetone and DMSO. The short oligomer 1 can sandwich the studied anions with high affinity in acetone. Addition of 5% water to acetone results in overall decreases in the binding strength due to the binding competition from water, but does not change the basic binding mode. The highly competitive H-bonding solvent DMSO causes the receptor-anion interactions to become even weaker. However, in DMSO, the short receptor 1 is still able to bind the halide anions with moderate affinities in a 1:1 stoichiometry, whereas the longer oligomer 2 forms double-strand helices with an anion wrapped inside for all anions investigated so far.

Highly selective naked-eye anion sensors based on thioureido or amido calix[4]arenes

Calix[4]arene-thiourea and -tetraamide naked-eye receptors do not show any tendency to self-aggregation and are highly sensitive towards small monoanions; association constants in DMSO for halogenides (chloride to iodide) and HSO4 – are <200 m –1. Basic anions deprotonate both receptors leading to a high and selective optical readout. Binding constants for carboxylates, fluoride, and dihydrogen phosphate are three orders of magnitude higher (~105 m –1) in case of the tetrathiourea receptor.

Substituent directed selectivity in anion recognition by a new class of simple osmium-pyrazole derived receptors

The present article deals with the structurally, spectroscopically and electrochemically characterised osmium-bipyridyl derived complexes [(bpy)2Os(II)(HL1)Cl]ClO4 [1]ClO4 and [(bpy)2Os(II)(HL2)Cl]ClO4 [2]ClO4 incorporating neutral and monodentate pyrazole derivatives (HL) with one free NH function (bpy = 2,2'-bipyridine, HL1 = pyrazole, HL2 = 3,5-dimethylpyrazole). The crystal structures of [1]ClO4 and [2]ClO4 reveal intramolecular hydrogen bonding interactions between the free NH proton of HL and the equatorially placed Cl(-) ligand (N-HCl) with donor-acceptor distances of 3.114(7) Å and 3.153(6) Å as well as intermolecular hydrogen bonding interactions between the NH proton and one of the oxygen atoms of ClO4(-) (N-HO) with donor-acceptor distances of 2.870(10) Å and 3.024(8) Å, respectively. The effect of hydrogen bonding interactions has translated into the less acidic nature of the NH proton of the coordinated HL with estimated pKa > 12. 1(+) and 2(+) exhibit reversible Os(II)/(III) and irreversible Os(III)/(IV) processes in CH3CN within ± 2.0 V versus SCE. The effect of 3,5-dimethyl substituted HL2 on 2(+) has been reflected in the appreciable lowering (40 mV) of the Os(II/III) potential, along with the further decrease in the acidity of the NH proton (pKa > 13.0) with regard to HL1 coordinated 1(+) (pKa: ∼ 12.3). The electronic spectral features of Os(ii) (1(+)/2(+)) and electrochemically generated Os(III) (1(2+)/2(2+)) derived complexes have been analysed by TD-DFT calculations. The efficacy of the 1(+) and 2(+) encompassing free NH proton towards the anion recognition process has been evaluated by different experimental investigations using a wide variety of anions. It however establishes that receptor 1(+) can recognise both F(-) and OAc(-) in acetonitrile solution, while 2(+) is exclusively selective for the F(-) ion.

Anion coordinated capsules and pseudocapsules of tripodal amide, urea and thiourea scaffolds

This review provides a detailed and comparative account of the solid- and solution-states anion (halides and oxyanions) binding affinities of hydrogen bonding tripodal scaffolds.

C 3v-symmetric anion receptors with guanidine recognition motifs for ratiometric sensing of fluoride

Two new tripodal receptors 3 and 4 derived from a trindane framework having guanidine groups acting as hydrogen bond acceptors are synthesized and characterized for the selective recognition of anions.

An NHC silver(i) macrometallocycle: synthesis, structure and selective recognition of iodide anions

An NHC silver(i) crown ether 1 has been synthesized, and the recognition of I⁻ using 1 as a receptor was studied.

Efficient sensing of fluoride ions in water using a novel water soluble self-assembled supramolecular sensor based on pillar[5]arene

By rationally introducing competitive coordination, the supramolecular sensors could reversibly sense Fe³⁺ and F⁻ in water with high selectivity and sensitivity.

Novel structurally tuned DAMN receptor for “in situ” diagnosis of bicarbonate in environmental waters

A novel receptor for specific and prompt bicarbonate anion (HCO₃⁻) recognition is presented. HCO₃⁻ triggers facile ICT, which provides “in situ” recognition of water soluble carbonates. For the first time, “on-site” estimation of HCO₃⁻ in environmental waters is demonstrated.