Cheatham TE, Brooks BR, Kollman PA. Molecular modeling of nucleic acid structure: electrostatics and solvation.
CURRENT PROTOCOLS IN NUCLEIC ACID CHEMISTRY 2001;
Chapter 7:Unit 7.9. [PMID:
18428877 PMCID:
PMC4091950 DOI:
10.1002/0471142700.nc0709s05]
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Abstract
This unit presents an overview of computer simulation techniques as applied to nucleic acid systems, ranging from simple in vacuo molecular modeling techniques to more complete all-atom molecular dynamics treatments that include an explicit representation of the environment. The third in a series of four units, this unit focuses on critical issues in solvation and the treatment of electrostatics.
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