301
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Teramura H, Sasaki K, Oshima T, Aikawa S, Matsuda F, Okamoto M, Shirai T, Kawaguchi H, Ogino C, Yamasaki M, Kikuchi J, Kondo A. Changes in Lignin and Polysaccharide Components in 13 Cultivars of Rice Straw following Dilute Acid Pretreatment as Studied by Solution-State 2D 1H-13C NMR. PLoS One 2015; 10:e0128417. [PMID: 26083431 PMCID: PMC4470627 DOI: 10.1371/journal.pone.0128417] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2015] [Accepted: 04/27/2015] [Indexed: 11/18/2022] Open
Abstract
A renewable raw material, rice straw is pretreated for biorefinery usage. Solution-state two-dimensional (2D) 1H-13 C hetero-nuclear single quantum coherence (HSQC) nuclear magnetic resonance (NMR) spectroscopy, was used to analyze 13 cultivars of rice straw before and after dilute acid pretreatment, to characterize general changes in the lignin and polysaccharide components. Intensities of most (15 of 16) peaks related to lignin aromatic regions, such as p-coumarate, guaiacyl, syringyl, p-hydroxyphenyl, and cinnamyl alcohol, and methoxyl, increased or remained unchanged after pretreatment. In contrast, intensities of most (11 of 13) peaks related to lignin aliphatic linkages or ferulate decreased. Decreased heterogeneity in the intensities of three peaks related to cellulose components in acid-insoluble residues resulted in similar glucose yield (0.45-0.59 g/g-dry biomass). Starch-derived components showed positive correlations (r = 0.71 to 0.96) with glucose, 5-hydroxymethylfurfural (5-HMF), and formate concentrations in the liquid hydrolysates, and negative correlations (r = -0.95 to -0.97) with xylose concentration and acid-insoluble residue yield. These results showed the fate of lignin and polysaccharide components by pretreatment, suggesting that lignin aromatic regions and cellulose components were retained in the acid insoluble residues and starch-derived components were transformed into glucose, 5-HMF, and formate in the liquid hydrolysate.
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Affiliation(s)
- Hiroshi Teramura
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Kengo Sasaki
- Organization of Advanced Science and Technology, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Tomoko Oshima
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Shimpei Aikawa
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Fumio Matsuda
- Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, Yamadaoka, Suita, Osaka, Japan
- RIKEN Biomass Engineering Program, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, Japan
| | - Mami Okamoto
- Food Resources Education and Research Center, Graduate School of Agricultural Science, Kobe University, Uzurano, Kasai, Hyogo, Japan
| | - Tomokazu Shirai
- RIKEN Biomass Engineering Program, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, Japan
| | - Hideo Kawaguchi
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Chiaki Ogino
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
| | - Masanori Yamasaki
- Food Resources Education and Research Center, Graduate School of Agricultural Science, Kobe University, Uzurano, Kasai, Hyogo, Japan
| | - Jun Kikuchi
- RIKEN Biomass Engineering Program, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, Japan
- RIKEN Center for Sustainable Resource Science, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, Japan
- Graduate School of Medical Life Science, Yokohama City University, Suehirocho, Tsurumi-ku, Yokohama, Japan
- Graduate School of Bioagricultural Sciences and School of Agricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Japan
| | - Akihiko Kondo
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Rokkodaicho, Nada-ku, Kobe, Hyogo, Japan
- RIKEN Biomass Engineering Program, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, Japan
- * E-mail:
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302
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Mbotchak L, Le Morvan C, Duong KL, Rousseau B, Tessier M, Fradet A. Purification, structural characterization, and modification of organosolv wheat straw lignin. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015; 63:5178-5188. [PMID: 25961961 DOI: 10.1021/acs.jafc.5b02071] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Biolignin, a wheat straw lignin produced by acetic acid/formic acid/water hydrolysis, was characterized by (31)P and (13)C-(1)H 2D NMR spectroscopy and by size-exclusion chromatography. Biolignin is a mixture of low molar mass compounds (Mn = 1660 g/mol) made up of S, G, and H units and of coumaric and ferulic acid units. β-5 and β-O-4 interunit linkages are partially acylated in the γ-position by acetate and p-coumarate groups. Deacylated samples with a low content of contaminants were obtained by combining alkaline hydrolysis and solvent extraction. The high phenolic OH content found by (31)P NMR reflects the presence of condensed aromatic units, such as 5-5 units. Reaction of purified lignin with ethanol and ethane-1,2-diol yielded esterified lignins much more soluble than Biolignin in common organic solvents. During this reaction, the secondary OH of β-O-4 linkages was simultaneously etherified. Phenol hydroxyethylation by 2-chloroethanol yielded samples containing only aliphatic hydroxyl groups.
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Affiliation(s)
- Laurie Mbotchak
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
| | - Clara Le Morvan
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
| | - Khanh Linh Duong
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
| | - Brigitte Rousseau
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
| | - Martine Tessier
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
| | - Alain Fradet
- Sorbonne Universités, UPMC Univ Paris 06, Institut Parisien de Chimie Moléculaire UMR 8232, Chimie des Polyméres, F-75005 Paris, France
- CNRS, IPCM UMR 8232, F-75005, Paris, France
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303
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Wen JL, Sun SL, Xue BL, Sun RC. Structural elucidation of inhomogeneous lignins from bamboo. Int J Biol Macromol 2015; 77:250-9. [DOI: 10.1016/j.ijbiomac.2015.03.044] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2014] [Revised: 03/05/2015] [Accepted: 03/20/2015] [Indexed: 10/23/2022]
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304
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Barros J, Serk H, Granlund I, Pesquet E. The cell biology of lignification in higher plants. ANNALS OF BOTANY 2015; 115:1053-74. [PMID: 25878140 PMCID: PMC4648457 DOI: 10.1093/aob/mcv046] [Citation(s) in RCA: 367] [Impact Index Per Article: 36.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2015] [Revised: 02/23/2015] [Accepted: 03/10/2015] [Indexed: 05/18/2023]
Abstract
BACKGROUND Lignin is a polyphenolic polymer that strengthens and waterproofs the cell wall of specialized plant cell types. Lignification is part of the normal differentiation programme and functioning of specific cell types, but can also be triggered as a response to various biotic and abiotic stresses in cells that would not otherwise be lignifying. SCOPE Cell wall lignification exhibits specific characteristics depending on the cell type being considered. These characteristics include the timing of lignification during cell differentiation, the palette of associated enzymes and substrates, the sub-cellular deposition sites, the monomeric composition and the cellular autonomy for lignin monomer production. This review provides an overview of the current understanding of lignin biosynthesis and polymerization at the cell biology level. CONCLUSIONS The lignification process ranges from full autonomy to complete co-operation depending on the cell type. The different roles of lignin for the function of each specific plant cell type are clearly illustrated by the multiple phenotypic defects exhibited by knock-out mutants in lignin synthesis, which may explain why no general mechanism for lignification has yet been defined. The range of phenotypic effects observed include altered xylem sap transport, loss of mechanical support, reduced seed protection and dispersion, and/or increased pest and disease susceptibility.
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Affiliation(s)
- Jaime Barros
- Umeå Plant Science Centre (UPSC), Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden
| | - Henrik Serk
- Umeå Plant Science Centre (UPSC), Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden
| | - Irene Granlund
- Umeå Plant Science Centre (UPSC), Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden
| | - Edouard Pesquet
- Umeå Plant Science Centre (UPSC), Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden
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305
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Underkofler KA, Teixeira RE, Pietsch SA, Knapp KG, Raines RT. Separation of Lignin from Corn Stover Hydrolysate with Quantitative Recovery of Ionic Liquid. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2015; 3:606-613. [PMID: 25866701 PMCID: PMC4389895 DOI: 10.1021/sc500731c] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Abundant lignocellulosic biomass could become a source of sugars and lignin, potential feedstocks for the now emergent bio-renewable economy. The production and conversion of sugars from biomass have been well-studied, but far less is known about the production of lignin that is amenable to valorization. Here we report the isolation of lignin generated from the hydrolysis of biomass dissolved in the ionic liquid 1-butyl-3-methylimidazolium chloride. We show that lignin can be isolated from the hydrolysate slurry by simple filtration or centrifugation, and that the ionic liquid can be recovered quantitatively by a straightforward wash with water. The isolated lignin is not only free from ionic liquid, but also lacks cellulosic residues and is substantially depolymerized, making it a promising feedstock for valorization by conversion into fuels and chemicals.
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Affiliation(s)
- Kaylee A. Underkofler
- Department of Chemistry, University of Wisconsin–Madison, 1101 University Avenue, Madison, Wisconsin 53706, USA
- DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, 1552 University Avenue, Madison, Wisconsin 53726, USA
| | | | | | - Kurtis G. Knapp
- Hyrax Energy, Inc., 3475-N Edison Way, Menlo Park, CA 94025, USA
| | - Ronald T. Raines
- Department of Chemistry, University of Wisconsin–Madison, 1101 University Avenue, Madison, Wisconsin 53706, USA
- DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, 1552 University Avenue, Madison, Wisconsin 53726, USA
- Department of Biochemistry, University of Wisconsin–Madison, 433 Babcock Drive, Madison, Wisconsin 53706, USA
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306
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Lan W, Lu F, Regner M, Zhu Y, Rencoret J, Ralph SA, Zakai UI, Morreel K, Boerjan W, Ralph J. Tricin, a flavonoid monomer in monocot lignification. PLANT PHYSIOLOGY 2015; 167:1284-95. [PMID: 25667313 PMCID: PMC4378158 DOI: 10.1104/pp.114.253757] [Citation(s) in RCA: 190] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Tricin was recently discovered in lignin preparations from wheat (Triticum aestivum) straw and subsequently in all monocot samples examined. To provide proof that tricin is involved in lignification and establish the mechanism by which it incorporates into the lignin polymer, the 4'-O-β-coupling products of tricin with the monolignols (p-coumaryl, coniferyl, and sinapyl alcohols) were synthesized along with the trimer that would result from its 4'-O-β-coupling with sinapyl alcohol and then coniferyl alcohol. Tricin was also found to cross couple with monolignols to form tricin-(4'-O-β)-linked dimers in biomimetic oxidations using peroxidase/hydrogen peroxide or silver (I) oxide. Nuclear magnetic resonance characterization of gel permeation chromatography-fractionated acetylated maize (Zea mays) lignin revealed that the tricin moieties are found in even the highest molecular weight fractions, ether linked to lignin units, demonstrating that tricin is indeed incorporated into the lignin polymer. These findings suggest that tricin is fully compatible with lignification reactions, is an authentic lignin monomer, and, because it can only start a lignin chain, functions as a nucleation site for lignification in monocots. This initiation role helps resolve a long-standing dilemma that monocot lignin chains do not appear to be initiated by monolignol homodehydrodimerization as they are in dicots that have similar syringyl-guaiacyl compositions. The term flavonolignin is recommended for the racemic oligomers and polymers of monolignols that start from tricin (or incorporate other flavonoids) in the cell wall, in analogy with the existing term flavonolignan that is used for the low-molecular mass compounds composed of flavonoid and lignan moieties.
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Affiliation(s)
- Wu Lan
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Fachuang Lu
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Matthew Regner
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Yimin Zhu
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Jorge Rencoret
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Sally A Ralph
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Uzma I Zakai
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Kris Morreel
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - Wout Boerjan
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
| | - John Ralph
- Department of Energy Great Lakes Bioenergy Research Center, Wisconsin Energy Institute (W.L., F.L., M.R., Y.Z., J.Re., U.I.Z., J.Ra.), Department of Biological System Engineering (W.L., J.Ra.), and Department of Biochemistry (F.L., M.R., J.Ra.), University of Wisconsin, Madison, Wisconsin 53726;United States Forest Service, Forest Products Laboratory, Madison, Wisconsin 53726 (S.A.R.); andDepartment of Plant Systems Biology, Vlaams Instituut voor Biotechnologie, andDepartment of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Ghent, Belgium (K.M., W.B.)
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307
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Tian Z, Zong L, Niu R, Wang X, Li Y, Ai S. Recovery and characterization of lignin from alkaline straw pulping black liquor: As feedstock for bio-oil research. J Appl Polym Sci 2015. [DOI: 10.1002/app.42057] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Zhengbin Tian
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
| | - Lei Zong
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
| | - Rujie Niu
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
| | - Xiao Wang
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
| | - Yan Li
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
| | - Shiyun Ai
- College of Chemistry and Material Science; Shandong Agricultural University; 271018, Taian Shandong People's Republic of China
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308
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Linde D, Ruiz-Dueñas FJ, Fernández-Fueyo E, Guallar V, Hammel KE, Pogni R, Martínez AT. Basidiomycete DyPs: Genomic diversity, structural-functional aspects, reaction mechanism and environmental significance. Arch Biochem Biophys 2015; 574:66-74. [PMID: 25637654 DOI: 10.1016/j.abb.2015.01.018] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 01/15/2015] [Accepted: 01/21/2015] [Indexed: 11/26/2022]
Abstract
The first enzyme with dye-decolorizing peroxidase (DyP) activity was described in 1999 from an arthroconidial culture of the fungus Bjerkandera adusta. However, the first DyP sequence had been deposited three years before, as a peroxidase gene from a culture of an unidentified fungus of the family Polyporaceae (probably Irpex lacteus). Since the first description, fewer than ten basidiomycete DyPs have been purified and characterized, but a large number of sequences are available from genomes. DyPs share a general fold and heme location with chlorite dismutases and other DyP-type related proteins (such as Escherichia coli EfeB), forming the CDE superfamily. Taking into account the lack of an evolutionary relationship with the catalase-peroxidase superfamily, the observed heme pocket similarities must be considered as a convergent type of evolution to provide similar reactivity to the enzyme cofactor. Studies on the Auricularia auricula-judae DyP showed that high-turnover oxidation of anthraquinone type and other DyP substrates occurs via long-range electron transfer from an exposed tryptophan (Trp377, conserved in most basidiomycete DyPs), whose catalytic radical was identified in the H2O2-activated enzyme. The existence of accessory oxidation sites in DyP is suggested by the residual activity observed after site-directed mutagenesis of the above tryptophan. DyP degradation of substituted anthraquinone dyes (such as Reactive Blue 5) most probably proceeds via typical one-electron peroxidase oxidations and product breakdown without a DyP-catalyzed hydrolase reaction. Although various DyPs are able to break down phenolic lignin model dimers, and basidiomycete DyPs also present marginal activity on nonphenolic dimers, a significant contribution to lignin degradation is unlikely because of the low activity on high redox-potential substrates.
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Affiliation(s)
- Dolores Linde
- Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, E-28040 Madrid, Spain
| | | | - Elena Fernández-Fueyo
- Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, E-28040 Madrid, Spain
| | - Victor Guallar
- Joint BSC-CRG-IRB Research Program in Computational Biology, Barcelona Supercomputing Center, Jordi Girona 29, E-08034 Barcelona, Spain; ICREA, Passeig Lluís Companys 23, E-08010 Barcelona, Spain
| | - Kenneth E Hammel
- US Forest Products Laboratory, One Gifford Pinchot Drive, Madison, WI 53726, USA
| | - Rebecca Pogni
- Dept. Biotechnologies, Chemistry and Pharmacy, University of Siena, I-53100 Siena, Italy
| | - Angel T Martínez
- Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, E-28040 Madrid, Spain.
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309
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Rencoret J, Prinsen P, Gutiérrez A, Martínez ÁT, Del Río JC. Isolation and structural characterization of the milled wood lignin, dioxane lignin, and cellulolytic lignin preparations from brewer's spent grain. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015; 63:603-613. [PMID: 25520237 DOI: 10.1021/jf505808c] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The structure of the lignin from brewer's spent grain (BSG) has been studied in detail. Three different lignin preparations, the so-called "milled-wood" lignin (MWL), dioxane lignin (DL), and cellulolytic lignin (CEL), were isolated from BSG and then thoroughly characterized by pyrolysis GC/MS, 2D-NMR, and derivatization followed by reductive cleavage (DFRC). The data indicated that BSG lignin presents a predominance of guaiacyl units (syringyl/guaiacyl ratio of 0.4-0.5) with significant amounts of associated p-coumarates and ferulates. The flavone tricin was also present in the lignin from BSG, as also occurred in other grasses. 2D-NMR (HSQC) revealed that the main substructures present are β-O-4' alkyl-aryl ethers (77-79%) followed by β-5' phenylcoumarans (11-13%) and lower amounts of β-β' resinols (5-6%) and 5-5' dibenzodioxocins (3-5%). The results from 2D-NMR (HMBC) and DFRC indicated that p-coumarates are acylating the γ-carbon of lignin side chains and are mostly involved in condensed structures. DFRC analyses also indicated a minor degree of γ-acylation with acetate groups, which takes place preferentially on S lignin (6% of S units are acetylated) over G lignin (only 1% of G units are acetylated).
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Affiliation(s)
- Jorge Rencoret
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, P.O. Box 1052, E-41080 Seville, Spain
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310
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Le Brech Y, Delmotte L, Raya J, Brosse N, Gadiou R, Dufour A. High Resolution Solid State 2D NMR Analysis of Biomass and Biochar. Anal Chem 2015; 87:843-7. [DOI: 10.1021/ac504237c] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Yann Le Brech
- LRGP,
CNRS, Université de Lorraine, 1 Rue Grandville, 54000, Nancy, France
| | - Luc Delmotte
- IS2M,
CNRS, Université de Haute Alsace, 15 Rue Jean Starcky, BP 2488 68057, Mulhouse Cedex, France
| | - Jesus Raya
- ICS,
CNRS, Université de Strasbourg, 1 Rue Blaise Pascal, BP 296 R8 67008, Strasbourg Cedex, France
| | - Nicolas Brosse
- LERMAB, Université de Lorraine, BP239 54506, Vandoeuvre les Nancy
Cedex, France
| | - Roger Gadiou
- IS2M,
CNRS, Université de Haute Alsace, 15 Rue Jean Starcky, BP 2488 68057, Mulhouse Cedex, France
| | - Anthony Dufour
- LRGP,
CNRS, Université de Lorraine, 1 Rue Grandville, 54000, Nancy, France
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311
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Banoub J, Delmas GH, Joly N, Mackenzie G, Cachet N, Benjelloun-Mlayah B, Delmas M. A critique on the structural analysis of lignins and application of novel tandem mass spectrometric strategies to determine lignin sequencing. JOURNAL OF MASS SPECTROMETRY : JMS 2015; 50:5-48. [PMID: 25601673 DOI: 10.1002/jms.3541] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2013] [Revised: 10/31/2014] [Accepted: 11/03/2014] [Indexed: 05/27/2023]
Abstract
This review is devoted to the application of MS using soft ionization methods with a special emphasis on electrospray ionization, atmospheric pressure photoionization and matrix-assisted laser desorption/ionization MS and tandem MS (MS/MS) for the elucidation of the chemical structure of native and modified lignins. We describe and critically evaluate how these soft ionization methods have contributed to the present-day knowledge of the structure of lignins. Herein, we will introduce new nomenclature concerning the chemical state of lignins, namely, virgin released lignins (VRLs) and processed modified lignins (PML). VRLs are obtained by liberation of lignins through degradation of vegetable matter by either chemical hydrolysis and/or enzymatic hydrolysis. PMLs are produced by subjecting the VRL to a series of further chemical transformations and purifications that are likely to alter their original chemical structures. We are proposing that native lignin polymers, present in the lignocellulosic biomass, are not made of macromolecules linked to cellulose fibres as has been frequently reported. Instead, we propose that the lignins are composed of vast series of linear related oligomers, having different lengths that are covalently linked in a criss-cross pattern to cellulose and hemicellulose fibres forming the network of vegetal matter. Consequently, structural elucidation of VRLs, which presumably have not been purified and processed by any other type of additional chemical treatment and purification, may reflect the structure of the native lignin. In this review, we present an introduction to a MS/MS top-down concept of lignin sequencing and how this technique may be used to address the challenge of characterizing the structure of VRLs. Finally, we offer the case that although lignins have been reported to have very high or high molecular weights, they might not exist on the basis that such polymers have never been identified by the mild ionizing techniques used in modern MS.
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Affiliation(s)
- Joseph Banoub
- Department of Chemistry, Memorial University of Newfoundland, St John's, Newfoundland, A1C 5X1, Canada; Science Branch, Special Projects, Fisheries and Oceans Canada, St John's, NL, A1C 5X1, Canada
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312
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Evaluating Lignin-Rich Residues from Biochemical Ethanol Production of Wheat Straw and Olive Tree Pruning by FTIR and 2D-NMR. INT J POLYM SCI 2015. [DOI: 10.1155/2015/314891] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Lignin-rich residues from the cellulose-based industry are traditionally incinerated for internal energy use. The future biorefineries that convert cellulosic biomass into biofuels will generate more lignin than necessary for internal energy use, and therefore value-added products from lignin could be produced. In this context, a good understanding of lignin is necessary prior to its valorization. The present study focused on the characterization of lignin-rich residues from biochemical ethanol production, including steam explosion, saccharification, and fermentation, of wheat straw and olive tree pruning. In addition to the composition and purity, the lignin structures (S/G ratio, interunit linkages) were investigated by spectroscopy techniques such as FTIR and 2D-NMR. Together with the high lignin content, both residues contained significant amounts of carbohydrates, mainly glucose and protein. Wheat straw lignin showed a very low S/G ratio associated withp-hydroxycinnamates (p-coumarate and ferulate), whereas a strong predominance of S over G units was observed for olive tree pruning lignin. The main interunit linkages present in both lignins wereβ-O-4′ethers followed by resinols and phenylcoumarans. These structural characteristics determine the use of these lignins in respect to their valorization.
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313
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Balakshin MY, Capanema EA. Comprehensive structural analysis of biorefinery lignins with a quantitative13C NMR approach. RSC Adv 2015. [DOI: 10.1039/c5ra16649g] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The advance in analytical methodology is critical for the progress in the biorefinery and lignin commercialization.
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314
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Abstract
Lignin provides structural support, a mechanical barrier against microbial infestation and facilitates movement of water inside plant systems. It is the second most abundant natural polymer in the terrestrial environments and possesses unique routes for the production of bulk and specialty chemicals with aromatic/phenolic skeletons. The commercial applications of lignin are limited and it is often recognized for its negative impact on the biochemical conversion of lignocellulosic biomass to fuels and chemicals. Understanding of the structure of lignin monomers and their interactions among themselves, as well as with carbohydrate polymers in biomass, is vital for the development of innovative biomass deconstruction processes and thereby valorization of all biopolymers of lignocellulosic residues, including lignin. In this paper, we review the major energy crops and their lignin structure, as well as the recent developments in biomass lignin characterization, with special focus on 1D and 2D Nuclear Magnetic Resonance (NMR) techniques.
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Affiliation(s)
- Yadhu N. Guragain
- Bioprocessing and Renewable Energy Laboratory, Department of Grain Science and Industry, Kansas State University, Manhattan, Kansas 66506, USA
| | - Alvaro I. Herrera
- Department of Biochemistry and Molecular Biophysics, Kansas State University, Manhattan, Kansas 66506, USA
| | - Praveen V. Vadlani
- Bioprocessing and Renewable Energy Laboratory, Department of Grain Science and Industry, Kansas State University, Manhattan, Kansas 66506, USA
| | - Om Prakash
- Department of Biochemistry and Molecular Biophysics, Kansas State University, Manhattan, Kansas 66506, USA
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315
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Can laccases catalyze bond cleavage in lignin? Biotechnol Adv 2015; 33:13-24. [DOI: 10.1016/j.biotechadv.2014.12.008] [Citation(s) in RCA: 224] [Impact Index Per Article: 22.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Revised: 12/06/2014] [Accepted: 12/25/2014] [Indexed: 11/13/2022]
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316
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Wu JL, Pan TF, Guo ZX, Pan DM. Specific lignin accumulation in granulated juice sacs of Citrus maxima. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:12082-12089. [PMID: 25419620 DOI: 10.1021/jf5041349] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Juice sac granulation occurring in pummelo fruits [Citrus maxima (Burm.) Merr.] is an undesirable trait, and the underlying mechanism remains unresolved. Previous studies have shown that lignin metabolism is closely associated with the process of juice sac granulation. Here, a method suitable for lignin isolation from pummelo tissues is established. Acetylated lignins from different pummelo tissues and cultivars were analyzed by HSQC NMR. The results showed that lignins in granulated juice sacs were characterized by an extremely high abundance of guaiacyl units (91.13-96.82%), in contrast to lignins from other tissues, including leaves, stems, and segment membranes. The abnormally accumulated lignins in granulated juice sacs were specific and mainly polymerized from coniferyl alcohol. No significant difference was found in lignin types among various cultivars. These findings indicated that the mechanism of juice sac granulation might be similar among various cultivars, although very different degrees of juice sac granulation can be observed.
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Affiliation(s)
- Jia-Ling Wu
- College of Horticulture and Institute of Storage Science and Technology of Horticultural Products, Fujian Agriculture and Forestry University , Fuzhou 350002, China
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317
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Zeng J, Singh D, Gao D, Chen S. Effects of lignin modification on wheat straw cell wall deconstruction by Phanerochaete chrysosporium. BIOTECHNOLOGY FOR BIOFUELS 2014; 7:161. [PMID: 25516769 PMCID: PMC4266972 DOI: 10.1186/s13068-014-0161-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2014] [Accepted: 10/16/2014] [Indexed: 05/26/2023]
Abstract
BACKGROUND A key focus in sustainable biofuel research is to develop cost-effective and energy-saving approaches to increase saccharification of lignocellulosic biomass. Numerous efforts have been made to identify critical issues in cellulose hydrolysis. Aerobic fungal species are an integral part of the carbon cycle, equip the hydrolytic enzyme consortium, and provide a gateway for understanding the systematic degradation of lignin, hemicelluloses, and cellulose. This study attempts to reveal the complex biological degradation process of lignocellulosic biomass by Phanerochaete chrysosporium in order to provide new knowledge for the development of energy-efficient biorefineries. RESULTS In this study, we evaluated the performance of a fungal biodegradation model, Phanerochaete chrysosporium, in wheat straw through comprehensive analysis. We isolated milled straw lignin and cellulase enzyme-treated lignin from fungal-spent wheat straw to determine structural integrity and cellulase absorption isotherms. The results indicated that P. chrysosporium increased the total lignin content in residual biomass and also increased the cellulase adsorption kinetics in the resulting lignin. The binding strength increased from 117.4 mL/g to 208.7 mL/g in milled wood lignin and from 65.3 mL/g to 102.4 mL/g in cellulase enzyme lignin. A detailed structural dissection showed a reduction in the syringyl lignin/guaiacyl lignin ratio and the hydroxycinnamate/lignin ratio as predominant changes in fungi-spent lignin by heteronuclear single quantum coherence spectroscopy. CONCLUSION P. chrysosporium shows a preference for degradation of phenolic terminals without significantly destroying other lignin components to unzip carbohydrate polymers. This is an important step in fungal growth on wheat straw. The phenolics presumably locate at the terminal region of the lignin moiety and/or link with hemicellulose to form the lignin-carbohydrate complex. Findings may inform the development of a biomass hydrolytic enzyme combination to enhance lignocellulosic biomass hydrolysis and modify the targets in plant cell walls.
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Affiliation(s)
- Jijiao Zeng
- Department of Biological Systems Engineering, Bioprocessing and Bioproduct Engineering Laboratory (BBEL), Washington State University, L.J. Smith 213, Pullman, Washington 99163 USA
| | - Deepak Singh
- Department of Biological Systems Engineering, Bioprocessing and Bioproduct Engineering Laboratory (BBEL), Washington State University, L.J. Smith 213, Pullman, Washington 99163 USA
| | - Difeng Gao
- Department of Biological Systems Engineering, Bioprocessing and Bioproduct Engineering Laboratory (BBEL), Washington State University, L.J. Smith 213, Pullman, Washington 99163 USA
| | - Shulin Chen
- Department of Biological Systems Engineering, Bioprocessing and Bioproduct Engineering Laboratory (BBEL), Washington State University, L.J. Smith 213, Pullman, Washington 99163 USA
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318
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Heikkinen H, Elder T, Maaheimo H, Rovio S, Rahikainen J, Kruus K, Tamminen T. Impact of steam explosion on the wheat straw lignin structure studied by solution-state nuclear magnetic resonance and density functional methods. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:10437-44. [PMID: 25290760 DOI: 10.1021/jf504622j] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Chemical changes of lignin induced by the steam explosion (SE) process were elucidated. Wheat straw was studied as the raw material, and lignins were isolated by the enzymatic mild acidolysis lignin (EMAL) procedure before and after the SE treatment for analyses mainly by two-dimensional (2D) [heteronuclear single-quantum coherence (HSQC) and heteronuclear multiple-bond correlation (HMBC)] and (31)P nuclear magnetic resonance (NMR). The β-O-4 structures were found to be homolytically cleaved, followed by recoupling to β-5 linkages. The homolytic cleavage/recoupling reactions were also studied by computational methods, which verified their thermodynamic feasibility. The presence of the tricin bound to wheat straw lignin was confirmed, and it was shown to participate in lignin reactions during the SE treatment. The preferred homolytic β-O-4 cleavage reaction was calculated to follow bond dissociation energies: G-O-G (guaiacyl) (69.7 kcal/mol) > G-O-S (syringyl) (68.4 kcal/mol) > G-O-T (tricin) (67.0 kcal/mol).
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Affiliation(s)
- Harri Heikkinen
- VTT Technical Research Centre of Finland , Biologinkuja 7, Espoo, FI-02044 VTT, Finland
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319
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Sun SL, Wen JL, Ma MG, Sun RC. Structural elucidation of sorghum lignins from an integrated biorefinery process based on hydrothermal and alkaline treatments. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:8120-8. [PMID: 25090032 DOI: 10.1021/jf501669r] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
An integrated process based on hydrothermal pretreatment (HTP) (i.e., 110-230 °C, 0.5-2.0 h) and alkaline post-treatment (2% NaOH at 90 °C for 2.0 h) has been performed for the production of xylooligosaccharide, lignin, and digestible substrate from sweet sorghum stems. The yield, purity, dissociation mechanisms, structural features, and structural transformations of alkali lignins obtained from the integrated process were investigated. It was found that the HTP process facilitated the subsequent alkaline delignification, releasing lignin with the highest yield (79.3%) and purity from the HTP residue obtained at 190 °C for 0.5 h. All of the results indicated that the cleavage of the β-O-4 linkages and degradation of β-β and β-5 linkages occurred under the harsh HTP conditions. Depolymerization and condensation reactions simultaneously occurred at higher temperatures (≥ 170 °C). Moreover, the thermostability of lignin was positively related to its molecular weight, but was also affected by the inherent structures, such as β-O-4 linkages and condensed units. These findings will enhance the understanding of structural transformations of the lignins during the integrated process and maximize the potential utilizations of the lignins in a current biorefinery process.
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Affiliation(s)
- Shao-Long Sun
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University , Beijing 100083, China
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320
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Huang X, Korányi TI, Boot MD, Hensen EJM. Catalytic depolymerization of lignin in supercritical ethanol. CHEMSUSCHEM 2014; 7:2276-88. [PMID: 24867490 DOI: 10.1002/cssc.201402094] [Citation(s) in RCA: 138] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2014] [Revised: 03/29/2014] [Indexed: 05/09/2023]
Abstract
One-step valorization of soda lignin in supercritical ethanol using a CuMgAlOx catalyst results in high monomer yield (23 wt%) without char formation. Aromatics are the main products. The catalyst combines excellent deoxygenation with low ring-hydrogenation activity. Almost half of the monomer fraction is free from oxygen. Elemental analysis of the THF-soluble lignin residue after 8 h reaction showed a 68% reduction in O/C and 24% increase in H/C atomic ratios as compared to the starting Protobind P1000 lignin. Prolonged reaction times enhanced lignin depolymerization and reduced the amount of repolymerized products. Phenolic hydroxyl groups were found to be the main actors in repolymerization and char formation. 2D HSQC NMR analysis evidenced that ethanol reacts by alkylation and esterification with lignin fragments. Alkylation was found to play an important role in suppressing repolymerization. Ethanol acts as a capping agent, stabilizing the highly reactive phenolic intermediates by O-alkylating the hydroxyl groups and by C-alkylating the aromatic rings. The use of ethanol is significantly more effective in producing monomers and avoiding char than the use of methanol. A possible reaction network of the reactions between the ethanol and lignin fragments is discussed.
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Affiliation(s)
- Xiaoming Huang
- Schuit Institute of Catalysis, Inorganic Materials Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven (The Netherlands)
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321
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Prozil SO, Evtuguin DV, Silva AMS, Lopes LPC. Structural characterization of lignin from grape stalks (Vitis vinifera L.). JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:5420-8. [PMID: 24892733 DOI: 10.1021/jf502267s] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
The chemical structure of lignin from grape stalks, an abundant waste of winemaking, has been studied. The dioxane lignin was isolated from extractive- and protein-free grape stalks (Vitis vinifera L.) by modified acidolytic procedure and submitted to a structural analysis by wet chemistry (nitrobenzene and permanganate oxidation (PO)) and spectroscopic techniques. The results obtained suggest that grape stalk lignin is an HGS type with molar proportions of p-hydroxyphenyl (H), guaiacyl (G) and syringyl (S) units of 3:71:26. Structural analysis by (1)H and (13)C NMR spectroscopy and PO indicates the predominance of β-O-4' structures (39% mol) in grape stalk lignin together with moderate amounts of β-5', β-β, β-1', 5-5', and 4-O-5' structures. NMR studies also revealed that grape lignin should be structurally associated with tannins. The condensation degree of grape stalks lignin is higher than that of conventional wood lignins and lignins from other agricultural residues.
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Affiliation(s)
- Sónia O Prozil
- CICECO/QOPNA and Department of Chemistry, University of Aveiro , 3810-193 Aveiro, Portugal
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322
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Petrik DL, Karlen SD, Cass CL, Padmakshan D, Lu F, Liu S, Le Bris P, Antelme S, Santoro N, Wilkerson CG, Sibout R, Lapierre C, Ralph J, Sedbrook JC. p-Coumaroyl-CoA:monolignol transferase (PMT) acts specifically in the lignin biosynthetic pathway in Brachypodium distachyon. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014; 77:713-26. [PMID: 24372757 PMCID: PMC4282527 DOI: 10.1111/tpj.12420] [Citation(s) in RCA: 114] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2013] [Revised: 12/16/2013] [Accepted: 12/18/2013] [Indexed: 05/17/2023]
Abstract
Grass lignins contain substantial amounts of p-coumarate (pCA) that acylate the side-chains of the phenylpropanoid polymer backbone. An acyltransferase, named p-coumaroyl-CoA:monolignol transferase (OsPMT), that could acylate monolignols with pCA in vitro was recently identified from rice. In planta, such monolignol-pCA conjugates become incorporated into lignin via oxidative radical coupling, thereby generating the observed pCA appendages; however p-coumarates also acylate arabinoxylans in grasses. To test the authenticity of PMT as a lignin biosynthetic pathway enzyme, we examined Brachypodium distachyon plants with altered BdPMT gene function. Using newly developed cell wall analytical methods, we determined that the transferase was involved specifically in monolignol acylation. A sodium azide-generated Bdpmt-1 missense mutant had no (<0.5%) residual pCA on lignin, and BdPMT RNAi plants had levels as low as 10% of wild-type, whereas the amounts of pCA acylating arabinosyl units on arabinoxylans in these PMT mutant plants remained unchanged. pCA acylation of lignin from BdPMT-overexpressing plants was found to be more than three-fold higher than that of wild-type, but again the level on arabinosyl units remained unchanged. Taken together, these data are consistent with a defined role for grass PMT genes in encoding BAHD (BEAT, AHCT, HCBT, and DAT) acyltransferases that specifically acylate monolignols with pCA and produce monolignol p-coumarate conjugates that are used for lignification in planta.
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Affiliation(s)
- Deborah L Petrik
- School of Biological Sciences, Illinois State UniversityNormal, IL, 61790, USA
- Department of Energy Great Lakes Bioenergy Research CenterMadison, WI, 53706, USA
| | - Steven D Karlen
- Department of Biochemistry, The Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, University of WisconsinMadison, WI, 53726, USA
| | - Cynthia L Cass
- School of Biological Sciences, Illinois State UniversityNormal, IL, 61790, USA
- Department of Energy Great Lakes Bioenergy Research CenterMadison, WI, 53706, USA
| | - Dharshana Padmakshan
- Department of Biochemistry, The Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, University of WisconsinMadison, WI, 53726, USA
| | - Fachuang Lu
- Department of Biochemistry, The Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, University of WisconsinMadison, WI, 53726, USA
| | - Sarah Liu
- Department of Biochemistry, The Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, University of WisconsinMadison, WI, 53726, USA
| | - Philippe Le Bris
- INRA, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
- AgroParisTech, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
| | - Sébastien Antelme
- INRA, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
- AgroParisTech, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
| | - Nicholas Santoro
- Department of Energy's Great Lakes Bioenergy Research Center, Michigan State UniversityEast Lansing, MI, 48824, USA
| | - Curtis G Wilkerson
- Department of Plant Biology, Department of Biochemistry and Molecular Biology, Department of Energy's Great Lakes Bioenergy Research Center, Michigan State UniversityEast Lansing, MI, 48824, USA
| | - Richard Sibout
- INRA, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
- AgroParisTech, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
| | - Catherine Lapierre
- INRA, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
- AgroParisTech, Institut Jean-Pierre Bourgin (IJPB) UMR1318, Saclay Plant Science78000, Versailles, France
| | - John Ralph
- Department of Biochemistry, The Department of Energy's Great Lakes Bioenergy Research Center, The Wisconsin Energy Institute, University of WisconsinMadison, WI, 53726, USA
| | - John C Sedbrook
- School of Biological Sciences, Illinois State UniversityNormal, IL, 61790, USA
- Department of Energy Great Lakes Bioenergy Research CenterMadison, WI, 53706, USA
- *(e-mail )
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323
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Synthesis of a carbamide-based dithiocarbamate chelator for the removal of heavy metal ions from aqueous solutions. J IND ENG CHEM 2014. [DOI: 10.1016/j.jiec.2013.05.018] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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324
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Zeng J, Tong Z, Wang L, Zhu JY, Ingram L. Isolation and structural characterization of sugarcane bagasse lignin after dilute phosphoric acid plus steam explosion pretreatment and its effect on cellulose hydrolysis. BIORESOURCE TECHNOLOGY 2014; 154:274-81. [PMID: 24412855 DOI: 10.1016/j.biortech.2013.12.072] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2013] [Revised: 12/12/2013] [Accepted: 12/14/2013] [Indexed: 05/09/2023]
Abstract
The structure of lignin after dilute phosphoric acid plus steam explosion pretreatment process of sugarcane bagasse in a pilot scale and the effect of the lignin extracted by ethanol on subsequent cellulose hydrolysis were investigated. The lignin structural changes caused by pretreatment were identified using advanced nondestructive techniques such as gel permeation chromatography (GPC), quantitative (13)C, and 2-D nuclear magnetic resonance (NMR). The structural analysis revealed that ethanol extractable lignin preserved basic lignin structure, but had relatively lower amount of β-O-4 linkages, syringyl/guaiacyl units ratio (S/G), p-coumarate/ferulate ratio, and other ending structures. The results also indicated that approximately 8% of mass weight was extracted by pure ethanol. The bagasse after ethanol extraction had an approximate 22% higher glucose yield after enzyme hydrolysis compared to pretreated bagasse without extraction.
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Affiliation(s)
- Jijiao Zeng
- Department of Agriculture & Biological Engineering, IFAS, University of Florida, Gainesville, FL 32611, USA
| | - Zhaohui Tong
- Department of Agriculture & Biological Engineering, IFAS, University of Florida, Gainesville, FL 32611, USA.
| | - Letian Wang
- Department of Agriculture & Biological Engineering, IFAS, University of Florida, Gainesville, FL 32611, USA
| | - J Y Zhu
- USDA Forest Service, Forest Products Laboratory, One Gifford Pinchot Dr., Madison, WI 53726, USA
| | - Lonnie Ingram
- Department of Microbiology & Cell Science, University of Florida, PO Box 110700, Gainesville, FL 32606, USA
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325
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Miedes E, Vanholme R, Boerjan W, Molina A. The role of the secondary cell wall in plant resistance to pathogens. FRONTIERS IN PLANT SCIENCE 2014; 5:358. [PMID: 25161657 PMCID: PMC4122179 DOI: 10.3389/fpls.2014.00358] [Citation(s) in RCA: 319] [Impact Index Per Article: 29.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/30/2014] [Accepted: 07/04/2014] [Indexed: 05/18/2023]
Abstract
Plant resistance to pathogens relies on a complex network of constitutive and inducible defensive barriers. The plant cell wall is one of the barriers that pathogens need to overcome to successfully colonize plant tissues. The traditional view of the plant cell wall as a passive barrier has evolved to a concept that considers the wall as a dynamic structure that regulates both constitutive and inducible defense mechanisms, and as a source of signaling molecules that trigger immune responses. The secondary cell walls of plants also represent a carbon-neutral feedstock (lignocellulosic biomass) for the production of biofuels and biomaterials. Therefore, engineering plants with improved secondary cell wall characteristics is an interesting strategy to ease the processing of lignocellulosic biomass in the biorefinery. However, modification of the integrity of the cell wall by impairment of proteins required for its biosynthesis or remodeling may impact the plants resistance to pathogens. This review summarizes our understanding of the role of the plant cell wall in pathogen resistance with a focus on the contribution of lignin to this biological process.
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Affiliation(s)
- Eva Miedes
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica MadridMadrid, Spain
- Departamento Biotecnología, Escuela Técnica Superior Ingenieros Agrónomos, Universidad Politécnica MadridMadrid, Spain
| | - Ruben Vanholme
- Department of Plant Systems Biology, VIB (Flanders Institute for Biotechnology)Gent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent UniversityGent, Belgium
| | - Wout Boerjan
- Department of Plant Systems Biology, VIB (Flanders Institute for Biotechnology)Gent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent UniversityGent, Belgium
| | - Antonio Molina
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica MadridMadrid, Spain
- Departamento Biotecnología, Escuela Técnica Superior Ingenieros Agrónomos, Universidad Politécnica MadridMadrid, Spain
- *Correspondence: Antonio Molina, Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica Madrid, Campus Montegancedo, M40 (Km. 38), Pozuelo de Alarcón, Madrid 28223, Spain e-mail:
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326
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Abstract
Phenolic compounds sourced from agro-based feedstock, viz. cashew nut shell liquid, lignin, tannin, palm oil, and coconut shell tar, have come up as sustainable alternatives to petro-based feedstock. This review explores their utility as green polymer feedstock with citation of ~ 600 references.
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Affiliation(s)
- Bimlesh Lochab
- Department of Chemistry
- School of Natural Sciences
- Shiv Nadar University
- Greater Noida, India
| | - Swapnil Shukla
- Department of Chemistry
- School of Natural Sciences
- Shiv Nadar University
- Greater Noida, India
| | - Indra K. Varma
- Centre for Polymer Science and Engineering
- IIT, Delhi
- New Delhi, India
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327
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Schnitzer M, Monreal CM, Powell EE. Wheat straw biomass: a resource for high-value chemicals. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2014; 49:51-67. [PMID: 24138469 DOI: 10.1080/03601234.2013.836924] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Two methods are proposed for increasing the commercial value of wheat straw based on its chemical constituents. The first method involves the determination and extraction of the major organic components of wheat straw, and the second involves those found and extracted in the aqueous and viscous biooils derived from the straw by fast pyrolysis. We used pyrolysis-field ionization mass spectrometry to identify the fine chemicals, which have high commercial values. The most abundant organic compounds in the wheat straw and biooil used as precursors for green chemicals are N-heterocycles (16 to 29% of the Total Ion Intensities, TII) and fatty acids (19 to 26% of TIIs), followed by phenols and lignins (12 to 23% of TIIs). Other important precursors were carbohydrates and amino acids (1 to 8% TIIs), n-alkyl benzenes (3 to 5% of TIIs), and diols (4 to 9% TIIs). Steroids and flavonoids represented 1 to 5% of TIIs in the three materials. Examples of valuable chemical compounds that can be extracted from the wheat straw and biooils are m/z 256, 270, 278, 280, 282 and 284, which are the n-C16 and n-C17 fatty acids respectively, and the C18:3, C18:2 and C18:1 unsaturated fatty acids. In particular, the C18:2 (linoleic acid) is present at a concentration of 1.7% of TIIs. Pyrazole, pyrazine, pyridine, indoles, quinolines, carbazoles, and their identified derivatives are found in relatively high concentrations (1 to 8% of TIIs). Other useful compounds are sterols such as m/z 412 (stigmasterol), m/z 414 (β-sitosterol), and steroids such m/z 394 (stigmastatriene), m/z 398 (stigmastene) and m/z 410 (stigmastadienone). Relative to the wheat straw, the relative concentration of all flavonoids such as m/z 222 (flavone) and m/z 224 (flavonone) doubled in the biooils. The conversion of wheat straw by fast pyrolysis, followed by chemical characterization with mass spectrometry, and extraction of fine chemicals, opens up new possibilities for increasing the monetary value of crop residues.
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Affiliation(s)
- Morris Schnitzer
- a Eastern Cereal and Oilseed Research Center , Agriculture and Agri-Food Canada , Ottawa , Canada
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328
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Yang S, Wen JL, Yuan TQ, Sun RC. Characterization and phenolation of biorefinery technical lignins for lignin–phenol–formaldehyde resin adhesive synthesis. RSC Adv 2014. [DOI: 10.1039/c4ra09595b] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Phenolation treatment under alkaline conditions could increase the active sites of technical lignin for phenol–formaldehyde resin adhesive synthesis.
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Affiliation(s)
- Sheng Yang
- Beijing Key Laboratory of Lignocellulosic Chemistry
- Beijing Forestry University
- Beijing 100083, China
| | - Jia-Long Wen
- Beijing Key Laboratory of Lignocellulosic Chemistry
- Beijing Forestry University
- Beijing 100083, China
| | - Tong-Qi Yuan
- Beijing Key Laboratory of Lignocellulosic Chemistry
- Beijing Forestry University
- Beijing 100083, China
| | - Run-Cang Sun
- Beijing Key Laboratory of Lignocellulosic Chemistry
- Beijing Forestry University
- Beijing 100083, China
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329
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Strassberger Z, Tanase S, Rothenberg G. The pros and cons of lignin valorisation in an integrated biorefinery. RSC Adv 2014. [DOI: 10.1039/c4ra04747h] [Citation(s) in RCA: 221] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
Wood to chemicals is the subject of this short critical review, that outlines the chemical and economic aspects of several short-term and long-term perspectives for the valorisation of lignin to aromatics, polymers and materials.
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Affiliation(s)
- Zea Strassberger
- Van't Hoff Institute for Molecular Sciences
- University of Amsterdam
- 1098 XH Amsterdam, The Netherlands
| | - Stefania Tanase
- Van't Hoff Institute for Molecular Sciences
- University of Amsterdam
- 1098 XH Amsterdam, The Netherlands
| | - Gadi Rothenberg
- Van't Hoff Institute for Molecular Sciences
- University of Amsterdam
- 1098 XH Amsterdam, The Netherlands
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330
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Zeng J, Helms GL, Gao X, Chen S. Quantification of wheat straw lignin structure by comprehensive NMR analysis. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:10848-57. [PMID: 24143908 DOI: 10.1021/jf4030486] [Citation(s) in RCA: 78] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
A further understanding of the structure of lignin from herbaceous crops is needed for advancing technologies of lignocellulosic biomass processing and utilization. A method was established in this study for analyzing structural motifs found in milled straw lignin (MSL) and cellulase-digested lignin (CEL) isolated from wheat straw by combining quantitative (13)C and HSQC NMR spectral analyses. The results showed that guaiacyl (G) was the predominant unit in wheat straw cell wall lignin over syringyl (S) and hydroxyphenyl (H) units. Up to 8.0 units of tricin were also detected in wheat straw lignin per 100 aromatic rings. Various interunit linkages, including β-O-4, β-5, β-β', β-1, α, β-diaryl ether, and 5-5'/4-O-β' as well as potential lignin-carbohydrate complex (LCC) bonds, were identified and quantified. These findings provide useful information for the development of biofuels and lignin-based materials.
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Affiliation(s)
- Jijiao Zeng
- Department of Biological Systems Engineering, The Bioprocessing and Bioproduct Engineering Laboratory (BBEL), L. J. Smith 213, Washington State University , Pullman, Washington 99163 United States
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331
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Caes BR, Van Oosbree TR, Lu F, Ralph J, Maravelias CT, Raines RT. Simulated moving bed chromatography: separation and recovery of sugars and ionic liquid from biomass hydrolysates. CHEMSUSCHEM 2013; 6:2083-2089. [PMID: 23939991 PMCID: PMC4349576 DOI: 10.1002/cssc.201300267] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2013] [Revised: 05/17/2013] [Indexed: 05/28/2023]
Abstract
Separation from bed, not board: Simulated moving bed chromatography, a continuous separation method, enables the nearly quantitative recovery of sugar products and ionic liquid solvent from chemical hydrolysates of biomass. The ensuing sugars support microbial growth, and the residual lignin from the process is intact.
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Affiliation(s)
- Benjamin R. Caes
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Chemistry, University of Wisconsin–Madison 1101 University Avenue, Madison, WI 53706 (USA)
| | - Thomas R. Van Oosbree
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Biochemistry, University of Wisconsin–Madison 433 Babcock Drive, Madison, WI 53706 (USA) Fax: (+1) 608-890-2583
| | - Fachuang Lu
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Biochemistry, University of Wisconsin–Madison 433 Babcock Drive, Madison, WI 53706 (USA) Fax: (+1) 608-890-2583
| | - John Ralph
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Biochemistry, University of Wisconsin–Madison 433 Babcock Drive, Madison, WI 53706 (USA) Fax: (+1) 608-890-2583
| | - Christos T. Maravelias
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Chemical and Biological Engineering University of Wisconsin–Madison 1415 Engineering Drive, Madison, WI 53706 (USA)
| | - Ronald T. Raines
- Great Lakes Bioenergy Research Center, University of Wisconsin–Madison 1550 Linden Drive, Madison, WI 53706 (USA)
- Department of Chemistry, University of Wisconsin–Madison 1101 University Avenue, Madison, WI 53706 (USA)
- Department of Biochemistry, University of Wisconsin–Madison 433 Babcock Drive, Madison, WI 53706 (USA) Fax: (+1) 608-890-2583
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332
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Structural variation of bamboo lignin before and after ethanol organosolv pretreatment. Int J Mol Sci 2013; 14:21394-413. [PMID: 24169436 PMCID: PMC3856011 DOI: 10.3390/ijms141121394] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2013] [Revised: 10/05/2013] [Accepted: 10/10/2013] [Indexed: 11/17/2022] Open
Abstract
In order to make better use of lignocellulosic biomass for the production of renewable fuels and chemicals, it is necessary to disrupt its recalcitrant structure through pretreatment. Specifically, organosolv pretreatment is a feasible method. The main advantage of this method compared to other lignocellulosic pretreatment technologies is the extraction of high-quality lignin for the production of value-added products. In this study, bamboo was treated in a batch reactor with 70% ethanol at 180 °C for 2 h. Lignin fractions were isolated from the hydrolysate by centrifugation and then precipitated as ethanol organosolv lignin. Two types of milled wood lignins (MWLs) were isolated from the raw bamboo and the organosolv pretreated residue separately. After the pretreatment, a decrease of lignin (preferentially guaiacyl unit), hemicelluloses and less ordered cellulose was detected in the bamboo material. It was confirmed that the bamboo MWL is of HGS type (p-hydroxyphenyl (H), vanillin (G), syringaldehyde (S)) associated with a considerable amount of p-coumarate and ferulic esters of lignin. The ethanol organosolv treatment was shown to remove significant amounts of lignin and hemicelluloses without strongly affecting lignin primary structure and its lignin functional groups.
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333
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You TT, Mao JZ, Yuan TQ, Wen JL, Xu F. Structural elucidation of the lignins from stems and foliage of Arundo donax Linn. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:5361-5370. [PMID: 23646880 DOI: 10.1021/jf401277v] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
As one of the potential energy crops, Arundo donax Linn. is a renewable source for the production of biofuels and bioproducts. In the present study, milled wood lignin (MWL) and alkaline lignin (AL) from stems and foliage of A. donax were isolated and characterized by FT-IR spectroscopy, UV spectroscopy, GPC, ³¹P NMR, 2D HSQC NMR, and DFRC. The results indicated that both stem and foliage lignins were HGS type lignins. The semiquantitative HSQC spectra analysis demonstrated a predominance of β-O-4' aryl ether linkages (71-82%), followed by β-β', β-5', β-1', and α,β-diaryl ethers linkages in the lignins. Compared to stem lignins, foliage lignins had less β-O-4' alkyl-aryl ethers, lower weight-average molecular weight, less phenolic OH, more H units, and lower S/G ratio. Moreover, tricin was found to incorporate into the foliage lignins (higher content of condensed G units) in significant amounts and might be alkaline-stable.
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Affiliation(s)
- Ting-Ting You
- Beijing Key Laboratory of Lignocellulosic Chemistry, Beijing Forestry University , Beijing, China
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334
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Gea G, Kjell S, Jean-François H. Integrated -omics: a powerful approach to understanding the heterogeneous lignification of fibre crops. Int J Mol Sci 2013; 14:10958-78. [PMID: 23708098 PMCID: PMC3709712 DOI: 10.3390/ijms140610958] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2013] [Revised: 05/15/2013] [Accepted: 05/17/2013] [Indexed: 12/15/2022] Open
Abstract
Lignin and cellulose represent the two main components of plant secondary walls and the most abundant polymers on Earth. Quantitatively one of the principal products of the phenylpropanoid pathway, lignin confers high mechanical strength and hydrophobicity to plant walls, thus enabling erect growth and high-pressure water transport in the vessels. Lignin is characterized by a high natural heterogeneity in its composition and abundance in plant secondary cell walls, even in the different tissues of the same plant. A typical example is the stem of fibre crops, which shows a lignified core enveloped by a cellulosic, lignin-poor cortex. Despite the great value of fibre crops for humanity, however, still little is known on the mechanisms controlling their cell wall biogenesis, and particularly, what regulates their spatially-defined lignification pattern. Given the chemical complexity and the heterogeneous composition of fibre crops' secondary walls, only the use of multidisciplinary approaches can convey an integrated picture and provide exhaustive information covering different levels of biological complexity. The present review highlights the importance of combining high throughput -omics approaches to get a complete understanding of the factors regulating the lignification heterogeneity typical of fibre crops.
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Affiliation(s)
- Guerriero Gea
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Sergeant Kjell
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
| | - Hausman Jean-François
- Department Environment and Agro-biotechnologies (EVA), Centre de Recherche Public-Gabriel Lippmann, 41, Rue du Brill, L-4422 Belvaux, Luxembourg; E-Mails: (G.G.); (S.K.)
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335
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Rencoret J, Ralph J, Marques G, Gutiérrez A, Martínez ÁT, del Río JC. Structural characterization of lignin isolated from coconut (Cocos nucifera) coir fibers. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:2434-45. [PMID: 23398235 DOI: 10.1021/jf304686x] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
The structure of the isolated milled "wood" lignin from coconut coir has been characterized using different analytical methods, including Py-GC/MS, 2D NMR, DFRC, and thioacidolysis. The analyses demonstrated that it is a p-hydroxyphenyl-guaiacyl-syringyl (H-G-S) lignin, with a predominance of G units (S/G ratio 0.23) and considerable amounts of associated p-hydroxybenzoates. Two-dimensional NMR indicated that the main substructures present in this lignin include β-O-4' alkyl aryl ethers followed by phenylcoumarans and resinols. Two-dimensional NMR spectra also indicated that coir lignin is partially acylated at the γ-carbon of the side chain with p-hydroxybenzoates and acetates. DFRC analysis showed that acetates preferentially acylate the γ-OH in S rather than in G units. Despite coir lignin's being highly enriched in G-units, thioacidolysis indicated that β-β' resinol structures are mostly derived from sinapyl alcohol. Finally, we find evidence that the flavone tricin is incorporated into the coconut coir lignin, as has been recently noted for various grasses.
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Affiliation(s)
- Jorge Rencoret
- Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC , PO Box 1052, E-41080 Seville, Spain
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336
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Cheng K, Sorek H, Zimmermann H, Wemmer DE, Pauly M. Solution-state 2D NMR spectroscopy of plant cell walls enabled by a dimethylsulfoxide-d6/1-ethyl-3-methylimidazolium acetate solvent. Anal Chem 2013; 85:3213-21. [PMID: 23413964 DOI: 10.1021/ac303529v] [Citation(s) in RCA: 90] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Lignocellulosic biomass is composed of the polysaccharides cellulose and hemicellulose and the polyphenol lignin. Many current methods for analyzing the structure of lignocelluloses involve a sequential extraction of the material and subsequent analysis of the resulting fractions, which is labor-intensive and time-consuming. The work presented here assesses the dissolution of whole lignocellulosic material, focusing on biomass derived from the perennial bioenergy grass Miscanthus. The solvent dimethylsulfoxide (DMSO)-d6 containing 1-ethyl-3-methylimidazolium acetate ([Emim]OAc) was able to dissolve lignocellulosic material completely and gave high-resolution 2D heteronuclear single quantum coherence (HSQC) NMR spectra of the entire array of wall polymers. Extrapolated time-zero HSQC was applied using DMSO-d6/[Emim]OAc-d14 and enabled quantitative analysis of structural traits of lignocellulose components.
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Affiliation(s)
- Kun Cheng
- Energy Biosciences Institute, University of California, Berkeley, California 94720, United States
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337
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del Río JC, Prinsen P, Gutiérrez A. A comprehensive characterization of lipids in wheat straw. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:1904-13. [PMID: 23373527 DOI: 10.1021/jf304252m] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The chemical composition of the lipids in wheat straw was studied in detail by gas chromatography and mass spectrometry. Important discrepancies with the data reported in previous papers were found. The predominant lipids identified were series of long-chain free fatty acids (25% of total extract), followed by series of free fatty alcohols (ca. 20%). High molecular weight esters of long chain fatty acids esterified to long chain fatty alcohols were also found (11%), together with lower amounts of other aliphatic series, such as n-alkanes, n-aldehydes, and glycerides (mono-, di-, and triglycerides). Relatively high amounts of β-diketones (10%), particularly 14,16-hentriacontanedione, which is the second most abundant single compound among the lipids in wheat straw, were also identified. Finally, steroid compounds (steroid hydrocarbons, steroid ketones, free sterols, sterol esters, and sterol glycosides) were also found, with sterols accounting for nearly 14% of all identified compounds.
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Affiliation(s)
- José C del Río
- Instituto de Recursos Naturales y Agrobiología de Sevilla, CSIC, Seville, Spain.
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338
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Wen JL, Sun SL, Xue BL, Sun RC. Recent Advances in Characterization of Lignin Polymer by Solution-State Nuclear Magnetic Resonance (NMR) Methodology. MATERIALS 2013; 6:359-391. [PMID: 28809313 PMCID: PMC5452107 DOI: 10.3390/ma6010359] [Citation(s) in RCA: 312] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Revised: 01/04/2013] [Accepted: 01/18/2013] [Indexed: 11/16/2022]
Abstract
The demand for efficient utilization of biomass induces a detailed analysis of the fundamental chemical structures of biomass, especially the complex structures of lignin polymers, which have long been recognized for their negative impact on biorefinery. Traditionally, it has been attempted to reveal the complicated and heterogeneous structure of lignin by a series of chemical analyses, such as thioacidolysis (TA), nitrobenzene oxidation (NBO), and derivatization followed by reductive cleavage (DFRC). Recent advances in nuclear magnetic resonance (NMR) technology undoubtedly have made solution-state NMR become the most widely used technique in structural characterization of lignin due to its versatility in illustrating structural features and structural transformations of lignin polymers. As one of the most promising diagnostic tools, NMR provides unambiguous evidence for specific structures as well as quantitative structural information. The recent advances in two-dimensional solution-state NMR techniques for structural analysis of lignin in isolated and whole cell wall states (insitu), as well as their applications are reviewed.
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Affiliation(s)
- Jia-Long Wen
- Beijing key laboratory of lignocellulosic chemistry, Beijing Forestry University, Beijing 100000, China.
| | - Shao-Long Sun
- Beijing key laboratory of lignocellulosic chemistry, Beijing Forestry University, Beijing 100000, China.
| | - Bai-Liang Xue
- Beijing key laboratory of lignocellulosic chemistry, Beijing Forestry University, Beijing 100000, China.
| | - Run-Cang Sun
- Beijing key laboratory of lignocellulosic chemistry, Beijing Forestry University, Beijing 100000, China.
- State Key Laboratory of Pulp and Paper Engineering, South China University of Technology, Guangzhou 510000, China.
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339
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Antioxidant activities of lignin extracted from sugarcane bagasse via different chemical procedures. Int J Biol Macromol 2012; 51:1116-20. [DOI: 10.1016/j.ijbiomac.2012.09.004] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2012] [Revised: 08/30/2012] [Accepted: 09/05/2012] [Indexed: 11/21/2022]
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340
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Alves EF, Bose SK, Francis RC, El Moussaouiti M. Trapping of p-coumaryl and coniferyl alcohol during soda-anthraquinone treatment: a means of estimating uncondensed β-O-4 structures in native lignin. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2012; 60:9202-9210. [PMID: 22920542 DOI: 10.1021/jf301977y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
In most native lignins, at least 50% of the phenylpropane (C(9)) units are involved in β-O-4 linkages. It was recently observed that ethylguaiacol (EG) was efficient at trapping coniferyl alcohol generated from the cleavage of uncondensed β-O-4 dimeric structures during soda-anthraquinone (AQ) or SAQ delignification of sugar maple wood meal. Some of the coniferyl alcohol was transformed to vinylguaiacol and isoeugenol, and the α-carbon atom in all three monomers formed C-C bonds with the C-5 position of EG. In the present research, eucalyptus and sugar cane bagasse meals were also investigated, and the yields of uncondensed β-O-4 structures in the nonsyringyl fraction were quantitated. The estimates of the uncondensed fraction of the lignin in the three samples (assuming S units are 90-95% uncondensed) were in close agreement with results from traditional but more tedious methods such as permanganate oxidation or spectroscopic methods requiring a sample representative of native lignin.
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Affiliation(s)
- Ericka F Alves
- Department of Paper and Bioprocess Engineering (PBE), SUNY College of Environmental Science & Forestry (ESF), 1 Forestry Drive, Syracuse, New York 13210, USA
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