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R Guimarães A, Barbosa RC, Mora Tello AC, P da Silva A, A Alves JM, Palhares Maringolo M, B F da Silva A. Generation, contraction, and polarisation of Gaussian basis sets for atomic and molecular calculations using the generator coordinate method with polynomial discretisation: atoms from Na through Cl. Phys Chem Chem Phys 2021; 23:16989-16997. [PMID: 34338697 DOI: 10.1039/d1cp01879e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The polynomial Generator Coordinate Hartree-Fock Gaussian basis sets, pGCHF, for the atoms Na, Mg, Al, Si, P, S, and Cl were generated using the generator coordinate method based on polynomial integral expansion to discretise the Griffin-Wheeler-Hartree-Fock equations. The pGCHF basis sets were contracted with the CONTRACT program based on the Davidson contraction model through which a set of 9s8p functions for the atoms Na through Cl were obtained. Polarisation exponents generated using the POLARIZATION program were added to the contracted pGCHF Gaussian basis sets. Molecular calculations at the DFT level of theory showed that the pGCHF basis sets can be used to calculate the atomisation energy with accuracy comparable to the well-established pcseg-3, def2-QZVP, and Sapporo-QZP basis sets; also, the complete basis set (CBS) limit estimate was obtained with the pcseg-3/pcseg-4 basis sets.
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Affiliation(s)
- Amanda R Guimarães
- Departamento de Química e Física Molecular, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, Brazil.
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Affiliation(s)
- Susi Lehtola
- Department of Chemistry, University of Helsinki, P.O. Box 55 (A. I. Virtasen aukio 1), FI-00014 Helsinki, Finland
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Brumboiu IE, Eriksson O, Norman P. Photoelectron Spectroscopy of Molecules Beyond the Electric Dipole Approximation. J Chem Theory Comput 2019; 15:5483-5494. [DOI: 10.1021/acs.jctc.9b00470] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Iulia Emilia Brumboiu
- Department of Theoretical Chemistry and Biology, KTH Royal Institute of Technology, 10691 Stockholm, Sweden
- Department of Chemistry, Korea Advanced Institute of Science and Technology, 34141 Daejeon, Korea
| | - Olle Eriksson
- Department of Physics and Astronomy, Uppsala University, 75120 Uppsala, Sweden
- School of Science and Technology, Örebro University, 70182 Örebro, Sweden
| | - Patrick Norman
- Department of Theoretical Chemistry and Biology, KTH Royal Institute of Technology, 10691 Stockholm, Sweden
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Wave Function Theories and Electronic Structure Methods: Quantum Chemistry, from Atoms to Molecules. Struct Chem 2018. [DOI: 10.1007/978-3-319-55875-2_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Accurate Gaussian basis sets for atomic and molecular calculations obtained from the generator coordinate method with polynomial discretization. J Mol Model 2015; 21:274. [PMID: 26419974 DOI: 10.1007/s00894-015-2813-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2015] [Accepted: 09/07/2015] [Indexed: 10/23/2022]
Abstract
Accurate Gaussian basis sets for atoms from H to Ba were obtained by means of the generator coordinate Hartree-Fock (GCHF) method based on a polynomial expansion to discretize the Griffin-Wheeler-Hartree-Fock equations (GWHF). The discretization of the GWHF equations in this procedure is based on a mesh of points not equally distributed in contrast with the original GCHF method. The results of atomic Hartree-Fock energies demonstrate the capability of these polynomial expansions in designing compact and accurate basis sets to be used in molecular calculations and the maximum error found when compared to numerical values is only 0.788 mHartree for indium. Some test calculations with the B3LYP exchange-correlation functional for N2, F2, CO, NO, HF, and HCN show that total energies within 1.0 to 2.4 mHartree compared to the cc-pV5Z basis sets are attained with our contracted bases with a much smaller number of polarization functions (2p1d and 2d1f for hydrogen and heavier atoms, respectively). Other molecular calculations performed here are also in very good accordance with experimental and cc-pV5Z results. The most important point to be mentioned here is that our generator coordinate basis sets required only a tiny fraction of the computational time when compared to B3LYP/cc-pV5Z calculations.
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Paschoal D, Marcial BL, Lopes JF, De Almeida WB, Dos Santos HF. The role of the basis set and the level of quantum mechanical theory in the prediction of the structure and reactivity of cisplatin. J Comput Chem 2012; 33:2292-302. [DOI: 10.1002/jcc.23061] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2012] [Revised: 06/02/2012] [Accepted: 06/10/2012] [Indexed: 11/10/2022]
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Aysin RR, Leites LA, Burlakov VV, Shur VB, Beweries T, Rosenthal U. Peculiarities of Vibrational Spectra and Electronic Structure of the Five‐Membered Metallacyclocumulenes of the Group 4 Metals. Eur J Inorg Chem 2012. [DOI: 10.1002/ejic.201101088] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Rinat R. Aysin
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilova Street, 119991 Moscow, Russia
| | - Larissa A. Leites
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilova Street, 119991 Moscow, Russia
| | - Vladimir V. Burlakov
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilova Street, 119991 Moscow, Russia
| | - Vladimir B. Shur
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilova Street, 119991 Moscow, Russia
| | - Torsten Beweries
- Leibniz‐Institut für Katalyse e. V. an der Universität Rostock, Albert‐Einstein‐Strasse 29a, 18059 Rostock, Germany
| | - Uwe Rosenthal
- Leibniz‐Institut für Katalyse e. V. an der Universität Rostock, Albert‐Einstein‐Strasse 29a, 18059 Rostock, Germany
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Kannemann FO, Becke AD. Atomic volumes and polarizabilities in density-functional theory. J Chem Phys 2012; 136:034109. [DOI: 10.1063/1.3676064] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Dolg M. Segmented Contracted Douglas–Kroll–Hess Adapted Basis Sets for Lanthanides. J Chem Theory Comput 2011; 7:3131-42. [DOI: 10.1021/ct200504u] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Michael Dolg
- Theoretical Chemistry, University of Cologne, Greinstr. 4, 50939 Cologne, Germany
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Pantazis DA, Neese F. All-Electron Scalar Relativistic Basis Sets for the Actinides. J Chem Theory Comput 2011. [DOI: 10.1021/ct100736b] [Citation(s) in RCA: 199] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Dimitrios A. Pantazis
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany
- Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany
| | - Frank Neese
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany
- Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany
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Aysin RR, Koroteev PS, Korlyukov AA, Zabula AV, Bukalov SS, Leites LA, Egorov MP, Nefedov OM. Molecular and electronic structures of germylene and stannylene complexes (CO)5MECl2·nTHF (M = Cr, W; E = Ge, Sn; n = 1, 2) as studied by IR and Raman spectroscopy, X-ray analysis, and quantum chemistry. Russ Chem Bull 2010. [DOI: 10.1007/s11172-010-0086-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Pantazis DA, Neese F. All-Electron Scalar Relativistic Basis Sets for the Lanthanides. J Chem Theory Comput 2009; 5:2229-38. [PMID: 26616609 DOI: 10.1021/ct900090f] [Citation(s) in RCA: 248] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Segmented all-electron relativistically contracted (SARC) basis sets are constructed for the elements 57La-71Lu and optimized for density functional theory (DFT) applications. The basis sets are intended for use in combination with the DKH2 or ZORA scalar relativistic Hamiltonians for which individually optimized contractions are provided. Significant computational advantages can be realized owing to the loose contraction of the SARC basis sets compared to generally contracted basis sets, while their compact size allows them to replace effective core potentials for routine studies of lanthanide complexes. The new basis sets are evaluated in DFT calculations of the first four ionization energies of the lanthanides. They yield results that accurately reproduce the experimental trends, confirming a balanced treatment of different electronic configurations. The performance of the basis sets is further assessed in molecular systems with a comprehensive study of the lanthanide trihalides. Despite their compact size, the SARC basis sets demonstrate consistent, efficient, and reliable performance and will be especially useful in calculations of molecular properties that require explicit treatment of the core electrons.
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Affiliation(s)
- Dimitrios A Pantazis
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany, and Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany
| | - Frank Neese
- Lehrstuhl für Theoretische Chemie, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany, and Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, 45470 Mülheim an der Ruhr, Germany
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Keefe CD, Butler E, Gillis E, MacDonald JL. Optical constants, dielectric constants, molar absorption coefficients, molar polarizability, vibrational assignment and transition moments of liquid iodobenzene between 4000 and 400 cm(-1) at 25 degrees C. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 67:125-38. [PMID: 16945575 DOI: 10.1016/j.saa.2006.06.032] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2006] [Accepted: 06/27/2006] [Indexed: 05/11/2023]
Abstract
This paper reports the complex refractive index, molar absorption coefficient and imaginary molar polarizability spectra of liquid iodobenzene at 25 degrees C. The imaginary molar polarizability spectrum was fitted with 184 classical damped harmonic bands to determine the integrated intensity of the individual transitions. The standard deviation of the fitted spectrum from the experimental spectrum is 0.024 cm(3) mol(-1), and the R(2) value of the fit is 0.9968 indicating that the fitted spectrum is an accurate representation of the experimental spectrum. The dipole moment derivatives with respect to the normal coordinates and transition moments were determined for 26 of the 30 fundamentals. The total intensities of the in-plane and out-of-plane fundamentals were compared to benzene and other monosubstituted benzene derivatives using the F-sum rule. It was found that the total intensity of the out-of-plane fundamentals is essentially the same for the different compounds while the total intensities for the in-plane fundamentals varies according to the electronegativities of the substituents.
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Affiliation(s)
- C Dale Keefe
- Department of Chemistry, Cape Breton University, Sydney, Nova Scotia, Canada B1P 6L2.
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Jorge F, de Castro E. Improved generator coordinate Hartree–Fock method: application to first-row atoms. Chem Phys Lett 1999. [DOI: 10.1016/s0009-2614(99)00144-x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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de Castro EVR, Jorge FE. Accurate universal Gaussian basis set for all atoms of the Periodic Table. J Chem Phys 1998. [DOI: 10.1063/1.475959] [Citation(s) in RCA: 125] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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