Synthesis and Use of Tetrahydrofuran- and Tetrahydropyran-Amino Acids

Generalizing the Aromatic δ‐Amino Acid Foldamer Helix

A series of aromatic oligoamide foldamer sequences containing different proportions of three δ‐amino acids derived from quinoline, pyridine, and benzene and possessing varying flexibility, for example due to methylene bridges, were synthesized. Crystallographic structures of two key sequences and ¹H NMR data in water concur to show that a canonical aromatic helix fold prevails in almost all cases and that helix stability critically depends on the ratio between rigid and flexible units. Notwithstanding subtle variations of curvature, i. e. the numbers of units per turn, the aromatic δ‐peptide helix is therefore shown to be general and tolerant of a great number of sp³ centers. We also demonstrate canonical helical folding upon alternating two monomers that do not promote folding when taken separately: folding occurs with two methylenes between every other unit, not with one methylene between every unit. These findings highlight that a fine‐tuning of helix handedness inversion kinetics, curvature, and side chain positioning in aromatic δ‐peptidic foldamers can be realized by systematically combining different yet compatible δ‐amino acids.

The Stereoselective Synthesis of the Nonnatural Enantiomers of Communiols A-C. A Stereochemical Correction

A stereoselective synthesis of the nonnatural enantiomers of the fungal metabolites communiols A-C is reported. A stereochemical misassignment has been corrected and the absolute configurations of the natural products have been unambiguously established.

Dynamics of OH radical generation in laser-induced photodissociation of tetrahydropyran at 193 nm

Tetrahydropyran (THP) undergoes photodissociation on excitation with ArF laser at 193 nm, generating OH radical as one of the transient photoproducts. Laser-induced fluorescence technique is used to detect the nascent OH radical and measure its energy state distribution. The OH radical is formed mostly in the ground vibrational level (v"=0), with low rotational excitation. The rotational distribution of OH (v"=0,J) is characterized by a temperature of 433+/-31 K, corresponding to a rotational energy of 0.86+/-0.06 kcalmol. Two Lambda-doublet levels, 2Pi+(A') and 2Pi-(A"), and the two spin-orbit states, the 2Pi(3/2) and 2Pi(1/2), of OH are populated statistically for all rotational levels. The relative translational energy associated with the photoproducts in the OH channel is calculated to be 21.9+/-3.2 kcal mol(-1), from the Doppler-broadened linewidth, giving an ft value of approximately 43%, and most of the remaining 57% of the available energy is distributed in the internal modes of the other photofragment, C5H9. The observed distribution of the available energy is explained well, using a hybrid model of energy partitioning, with an exit barrier of 40 kcal mol(-1). The potential-energy surface of the reaction channel was mapped by ab initio molecular-orbital calculations. Based on experimental and theoretical results, a mechanism for OH formation is proposed. Electronically excited THP relaxes to the ground electronic state, and from there, a sequence of reactions takes place, generating OH. The proposed mechanism first involves C-O bond scission, followed by a 1,3 H atom migration to O atom, and finally, the C-OH bond cleavage giving OH.

Folding Propensity of Cyclohexylether-δ-peptides

[structure: see text] Linear (n = 2-18) and cyclic oligomers (n = 3-8) of a cyclohexylether-delta-amino acid (COA) were prepared in high yield and stereopurity. CD spectra of the linear oligomers were indicative of secondary structure formation. X-ray crystal structures of cyclic COA oligomers revealed hydrophobic packing and internal 5- and 10-membered-ring hydrogen bonds. Ether and amide oxygens reside preferably in an ap orientation. This conformational locking is apparently broken by a C-2 substituent in an asymmetric cyclotrimer, for which a zeolithe-like tubular structure was found.

Synthesis and functional studies of THF-gramicidin hybrid ion channels

THF-gramicidin hybrids 2-4 with the L-THF amino acid 1 in positions 11 and 12 and compounds 5-8 with the D-THF amino acid ent-1 in positions 10 and 11 were synthesized and their ion channel properties were studied by single-channel-current analysis. The replacement of positions 11 and 12 by the L-THF amino acid 1 gave a strongly reduced channel performance. In contrast, replacement of positions 10 and 11 by the D-THF amino acid ent-1 gave rise to new and interesting channel properties. For the permeability ratios, the ion selectivity shifts from Eisenman I towards Eisenman III selectivity and the channels display ms-dynamics. Most remarkable is the asymmetric compound 8, which inserts selectively into a DPhPC membrane and displays voltage-directed gating dynamics.