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Franconetti A, Nuñez-Franco R, de Gonzalo G, Iglesias-Sigüenza J, Álvarez E, Cabrera-Escribano F. Fingerprinting the Nature of Anions in Pyrylium Complexes: Dual Binding Mode for Anion-π Interactions. Chemphyschem 2018; 19:327-334. [PMID: 29215788 DOI: 10.1002/cphc.201700981] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Revised: 12/06/2017] [Indexed: 12/13/2022]
Abstract
The interplay between noncovalent interactions that involve oxygenated heteroaromatic rings have been studied for the first time in this work. In particular, we report an advance in knowledge-based anion-π interactions together with (C-H)+ ⋅⋅⋅anion contacts. To understand how the anion modulates these interactions, the synthesis of pyrylium salts with a variety of anions was performed by using an anionic metathesis methodology. The synthesized pyrylium complexes were classified in series, for example, anions derived from halogens, from oxoacids, from p-block elements, and from transition metals. Crystallographic data, DFT calculations, and NMR spectroscopy methods provided access to an overall insight into the noncovalent behavior of the anion in this kind of system. Based on the DFT calculations and 1 H NMR spectroscopy, pyrylium protons can be used as chemical tags to detect noncovalent interactions in this type of compound.
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Affiliation(s)
- Antonio Franconetti
- Departament de Química, Universitat Autònoma de Barcelona, 08193, Cerdanyola del Vallès, Spain
| | - Reyes Nuñez-Franco
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/ Profesor García González 1, 41012, Sevilla, Spain
| | - Gonzalo de Gonzalo
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/ Profesor García González 1, 41012, Sevilla, Spain
| | - Javier Iglesias-Sigüenza
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/ Profesor García González 1, 41012, Sevilla, Spain
| | - Eleuterio Álvarez
- Instituto de Investigaciones Químicas, C.S.I.C., Universidad de Sevilla, Av. Américo Vespucio 49, Isla de la Cartuja, 41092, Sevilla, Spain
| | - Francisca Cabrera-Escribano
- Departamento de Química Orgánica, Facultad de Química, Universidad de Sevilla, C/ Profesor García González 1, 41012, Sevilla, Spain
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Suresh V, Ahmed N, Youn IS, Kim KS. An Imidazolium-Based Fluorescent Cyclophane for the Selective Recognition of Iodide. Chem Asian J 2012; 7:658-63. [DOI: 10.1002/asia.201100941] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2011] [Indexed: 01/06/2023]
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3
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Ahmed N, Shirinfar B, Youn IS, Bist A, Suresh V, Kim KS. A highly selective fluorescent chemosensor for guanosine-5'-triphosphate via excimer formation in aqueous solution of physiological pH. Chem Commun (Camb) 2012; 48:2662-4. [PMID: 22222484 DOI: 10.1039/c2cc17145g] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new water-soluble and fluorescent imidazolium-anthracene cyclophane 1 effectively recognizes and differentiates the biologically important GTP and ATP in 100% aqueous solution of physiological pH 7.4. Fluorescence, (1)H-NMR spectra and ab initio calculations demonstrate that excimer formation and fluorescence enhancement occur upon GTP and ATP binding, respectively, through (C-H)(+)···A(-) hydrogen bond interactions.
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Affiliation(s)
- Nisar Ahmed
- Center for Superfunctional Materials, Department of Chemistry Pohang University of Science and Technology, Pohang 790-784, Korea
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4
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Ahmed N, Shirinfar B, Geronimo I, Kim KS. Fluorescent imidazolium-based cyclophane for detection of guanosine-5'-triphosphate and I(-) in aqueous solution of physiological pH. Org Lett 2011; 13:5476-9. [PMID: 21942818 DOI: 10.1021/ol202183t] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
A new water-soluble and fluorescent imidazolium-anthracene cyclophane (1) effectively recognizes the biologically important GTP and I(-) over other anions in a 100% aqueous solution of physiological pH 7.4. Fluorescence and (1)H NMR spectra and ab initio calculations demonstrate that emission arises from the formation of an excimer state and quenching occurs upon GTP/I(-) binding through (C-H)(+)···A(-) hydrogen bond interactions.
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Affiliation(s)
- Nisar Ahmed
- Center for Superfunctional Materials, Department of Chemistry, Pohang University of Science and Technology, Pohang 790-784, Korea
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5
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Quiñonero D, López KA, Deyà PM, Piña MN, Morey J. Synthetic Tripodal Squaramido-Based Receptors for the Complexation of Antineoplastic Folates in Water. European J Org Chem 2011. [DOI: 10.1002/ejoc.201100855] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Xu Z, Singh NJ, Kim SK, Spring DR, Kim KS, Yoon J. Induction-Driven Stabilization of the Anion-π Interaction in Electron-Rich Aromatics as the Key to Fluoride Inclusion in Imidazolium-Cage Receptors. Chemistry 2010; 17:1163-70. [DOI: 10.1002/chem.201002105] [Citation(s) in RCA: 148] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2010] [Indexed: 11/10/2022]
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Hua Y, Ramabhadran RO, Uduehi EO, Karty JA, Raghavachari K, Flood AH. Aromatic and aliphatic CH hydrogen bonds fight for chloride while competing alongside ion pairing within triazolophanes. Chemistry 2010; 17:312-21. [PMID: 21207627 DOI: 10.1002/chem.201002340] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2010] [Indexed: 02/02/2023]
Abstract
Triazolophanes are used as the venue to compete an aliphatic propylene CH hydrogen-bond donor against an aromatic phenylene one. Longer aliphatic C-H...Cl(-) hydrogen bonds were calculated from the location of the chloride within the propylene-based triazolophane. The gas-phase energetics of chloride binding (ΔG(bind) , ΔH(bind) , ΔS(bind) ) and the configurational entropy (ΔS(config) ) were computed by taking all low-energy conformations into account. Comparison between the phenylene- and propylene-based triazolophanes shows the computed gas-phase free energy of binding decreased from ΔG(bind) =-194 to -182 kJ mol(-1) , respectively, with a modest enthalpy-entropy compensation. These differences were investigated experimentally. An (1) H NMR spectroscopy study on the structure of the propylene triazolophane's 1:1 chloride complex is consistent with a weaker propylene CH hydrogen bond. To quantify the affinity differences between the two triazolophanes in dichloromethane, it was critical to obtain an accurate binding model. Four equilibria were identified. In addition to 1:1 complexation and 2:1 sandwich formation, ion pairing of the tetrabutylammonium chloride salt (TBA(+) ⋅Cl(-) ) and cation pairing of TBA(+) with the 1:1 triazolophane-chloride complex were observed and quantified. Each complex was independently verified by ESI-MS or diffusion NMR spectroscopy. With ion pairing deconvoluted from the chloride-receptor binding, equilibrium constants were determined by using (1) H NMR (500 μM) and UV/Vis (50 μM) spectroscopy titrations. The stabilities of the 1:1 complexes for the phenylene and propylene triazolophanes did not differ within experimental error, ΔG=(-38±2) and (-39±1) kJ mol(-1) , respectively, as verified by an NMR spectroscopy competition experiment. Thus, the aliphatic CH donor only revealed its weaker character when competing with aromatic CH donors within the propylene-based triazolophane.
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Affiliation(s)
- Yuran Hua
- Department of Chemistry, Indiana University, 800 E. Kirkwood Ave., Bloomington, IN 47405, USA
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Peters A, Wild U, Hübner O, Kaifer E, Himmel HJ. Mono- and Diprotonation of the Superbasic Bisguanidine 1,2-Bis(N,N,N′,N′-tetramethylguanidino)benzene (btmgb) and PtIIand PtIVComplexes of Chelating Bisguanidines and Guanidinates. Chemistry 2008; 14:7813-21. [DOI: 10.1002/chem.200800244] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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9
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Jadhav V, Herdtweck E, Schmidtchen F. Addressing Association Entropy by Reconstructing Guanidinium Anchor Groups for Anion Binding: Design, Synthesis, and Host–Guest Binding Studies in Polar and Protic Solutions. Chemistry 2008; 14:6098-107. [DOI: 10.1002/chem.200702036] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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10
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Fitzmaurice RJ, Gaggini F, Srinivasan N, Kilburn JD. Carboxylate binding in polar solvents using pyridylguanidinium salts. Org Biomol Chem 2007; 5:1706-14. [PMID: 17520138 DOI: 10.1039/b700988g] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of thiourea and guanidinium derivatives have been prepared and their ability to bind a carboxylate group has been investigated. Guanidinium 33, featuring two additional amides and a pyridine moiety, proved to be the most potent carboxylate binding site and was able to bind acetate in aqueous solvent systems (K(ass) = 480 M(-1) in 30% H(2)O-DMSO). The pyridine moiety is critical to obtaining strong binding, and comparison with the binding properties of analogous compounds in which the pyridine is replaced by a benzene ring provides a striking example of enthalpy-entropy compensation.
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Sánchez L, Sierra M, Martín N, Myles AJ, Dale TJ, Rebek J, Seitz W, Guldi DM. Exceptionally Strong Electronic Communication through Hydrogen Bonds in Porphyrin–C60 Pairs. Angew Chem Int Ed Engl 2006; 45:4637-41. [PMID: 16791901 DOI: 10.1002/anie.200601264] [Citation(s) in RCA: 110] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Luis Sánchez
- Departamento de Química Orgánica, Facultad de Química, Universidad Complutense de Madrid, 28040 Madrid, Spain
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12
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Sánchez L, Sierra M, Martín N, Myles AJ, Dale TJ, Rebek J, Seitz W, Guldi DM. Exceptionally Strong Electronic Communication through Hydrogen Bonds in Porphyrin–C60 Pairs. Angew Chem Int Ed Engl 2006. [DOI: 10.1002/ange.200601264] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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13
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Kubik S, Reyheller C, Stüwe S. Recognition of Anions by Synthetic Receptors in Aqueous Solution. J INCL PHENOM MACRO 2005. [DOI: 10.1007/s10847-005-0601-6] [Citation(s) in RCA: 200] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Haj-Zaroubi M, Schmidtchen FP. Probing Binding-Mode Diversity in Guanidinium-Oxoanion Host-Guest Systems. Chemphyschem 2005; 6:1181-6. [PMID: 15883997 DOI: 10.1002/cphc.200400559] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
An attempt to experimentally estimate the role of binding-mode diversity (structural fuzziness) on the molecular recognition seen in the prominent guanidinium-oxoanion host-guest pair is described. The global heat response as measured by isothermal titration calorimetry in acetonitrile, which was obtained from the interaction of five different but structurally closely related guanidinium hosts with three rigid phosphinate guests of decreasing accessibility of their binding sites, is correlated to provide a trend analysis. All host-guest associations of 1:1 stoichiometry in this series are strongly enthalpy-driven. The change in complexation entropy can be related to the tightness of the mutual fit of the host-guest partners, which approaches a minimum limit and is interpreted as the unique lock-and-key binding mode. The ordinary host-guest complexation in this ensemble features substantial positive entropy changes that correlate inversely with the binding interface area. This finding excludes desolvation effects as the major cause of entropy production, and provides evidence for the existence of a broad variety of complex configurations rather than a single binding mode to represent the associated host-guest pair. This result bears on the molecular design of systems that vitally depend on structural fidelity, such as nanoassemblies or homogeneous catalysis.
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Affiliation(s)
- Manal Haj-Zaroubi
- Department of Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747 Garching, Germany
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Chellappan K, Singh NJ, Hwang IC, Lee JW, Kim KS. A Calix[4]imidazolium[2]pyridine as an Anion Receptor. Angew Chem Int Ed Engl 2005; 44:2899-903. [PMID: 15815988 DOI: 10.1002/anie.200500119] [Citation(s) in RCA: 215] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Kavitha Chellappan
- National Creative Research Initiative Center for Superfunctional Materials, Department of Chemistry, Division of Molecular and Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Korea
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Chellappan K, Singh NJ, Hwang IC, Lee JW, Kim KS. A Calix[4]imidazolium[2]pyridine as an Anion Receptor. Angew Chem Int Ed Engl 2005. [DOI: 10.1002/ange.200500119] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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17
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Kubik S, Kirchner R, Nolting D, Seidel J. A molecular oyster: a neutral anion receptor containing two cyclopeptide subunits with a remarkable sulfate affinity in aqueous solution. J Am Chem Soc 2002; 124:12752-60. [PMID: 12392422 DOI: 10.1021/ja026996q] [Citation(s) in RCA: 143] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
An artificial anion receptor is presented, in which two cyclohexapeptide subunits containing l-proline and 6-aminopicolinic acid subunits in an alternating sequence are connected via an adipinic acid spacer. This compound was devised to stabilize the 2:1 sandwich-type anion complexes that are observed when the two cyclopeptide moieties are not covalently connected and to obtain a 1:1 stoichiometry for these aggregates. Electrospray ionization mass spectrometry and NMR spectroscopic investigations showed that the bridged bis(cyclopeptide) does indeed form defined 1:1 complexes with halides, sulfate, and nitrate. ROESY NMR spectroscopy and molecular modeling allowed a structural assignment of the sulfate complex in solution. The stabilities of various anion complexes were determined by means of NMR titrations and isothermal titration microcalorimetry in 50% water/methanol. Both methods gave essentially the same quantitative results, namely stability constants that varied in the range 105-102 M-1 and decreased in the order SO42- > I- > Br- > Cl- > NO3-. This order was rationalized in terms of the size of the anions with the larger anions forming the more stable complexes because they better fit into the cavity of the host. The ability of sulfate to form stronger hydrogen bonds to the NH groups of the receptor, in addition to its slightly larger ionic radius with respect to iodide, causes the higher stability of the sulfate complex. No significant effect of the countercation on complex stability was observed. Furthermore, complex stability is enthalpically as well as entropically favored. A comparison of the iodide and sulfate complex stabilities of the ditopic receptor with those of a cyclopeptide that forms 1:1 anion complexes in solution showed that the presence of a second binding site increases complex stability by a factor of 100-350.
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Affiliation(s)
- Stefan Kubik
- Institut für Organische Chemie und Makromolekulare Chemie, Heinrich-Heine-Universität, Universitätsstrasse 1, D-40225 Düsseldorf, Germany.
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