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Iwamoto K, Matsuoka S, Ueda M. Excitable Ras dynamics-based screens reveal RasGEFX is required for macropinocytosis and random cell migration. Nat Commun 2025; 16:117. [PMID: 39746985 PMCID: PMC11696275 DOI: 10.1038/s41467-024-55389-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Accepted: 12/08/2024] [Indexed: 01/04/2025] Open
Abstract
Excitable systems of eukaryotic chemotaxis can generate asymmetric signals of Ras-GTP-enriched domains spontaneously to drive random cell migration without guidance cues. However, the molecules responsible for the spontaneous signal generation remain elusive. Here, we characterized RasGEFs encoded in Dictyostelium discoideum by live-cell imaging of the spatiotemporal dynamics of Ras-GTP and hierarchical clustering, finding that RasGEFX is primarily required for the spontaneous generation of Ras-GTP-enriched domains and is essential for random migration in combination with RasGEFB/M/U in starved cells, and they are dispensable for chemotaxis to chemoattractant cAMP. RasGEFX and RasGEFB that co-localize with Ras-GTP regulate the temporal periods and spatial sizes of the oscillatory Ras-GTP waves propagating along the membrane, respectively, and thus control the protrusions of motile cells differently, while RasGEFU and RasGEFM regulate adhesion and migration speed, respectively. Remarkably, RasGEFX is also important for Ras/PIP3-driven macropinocytosis in proliferating cells, but RasGEFB/M/U are not. These findings illustrate a specific and coordinated control of the cytoskeletal dynamics by multiple RasGEFs for spontaneous motility and macropinocytosis.
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Affiliation(s)
- Koji Iwamoto
- Laboratory of Single Molecule Biology, Graduate School of Science and Graduate School of Frontier Biosciences, Osaka University, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan
| | - Satomi Matsuoka
- Laboratory of Single Molecule Biology, Graduate School of Science and Graduate School of Frontier Biosciences, Osaka University, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan.
- Laboratory for Cell Signaling Dynamics, Center for Biosystems Dynamics Research (BDR), RIKEN, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan.
- PRESTO, JST, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan.
| | - Masahiro Ueda
- Laboratory of Single Molecule Biology, Graduate School of Science and Graduate School of Frontier Biosciences, Osaka University, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan.
- Laboratory for Cell Signaling Dynamics, Center for Biosystems Dynamics Research (BDR), RIKEN, 1-3 Yamadaoka, Suita, Osaka, 565-0871, Japan.
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Manich M, Bochet P, Boquet-Pujadas A, Rose T, Laenen G, Guillén N, Olivo-Marin JC, Labruyère E. Fibronectin induces a transition from amoeboid to a fan morphology and modifies migration in Entamoeba histolytica. PLoS Pathog 2024; 20:e1012392. [PMID: 39052670 PMCID: PMC11302856 DOI: 10.1371/journal.ppat.1012392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 08/06/2024] [Accepted: 07/04/2024] [Indexed: 07/27/2024] Open
Abstract
Cell migration modes can vary, depending on a number of environmental and intracellular factors. The high motility of the pathogenic amoeba Entamoeba histolytica is a decisive factor in its ability to cross the human colonic barrier. We used quantitative live imaging techniques to study the migration of this parasite on fibronectin, a key tissue component. Entamoeba histolytica amoebae on fibronectin contain abundant podosome-like structures. By using a laminar flow chamber, we determined that the adhesion forces generated on fibronectin were twice those on non-coated glass. When migrating on fibronectin, elongated amoeboid cells converted into fan-shaped cells characterized by the presence of a dorsal column of F-actin and a broad cytoplasmic extension at the front. The fan shape depended on the Arp2/3 complex, and the amoebae moved laterally and more slowly. Intracellular measurements of physical variables related to fluid dynamics revealed that cytoplasmic pressure gradients were weaker within fan-shaped cells; hence, actomyosin motors might be less involved in driving the cell body forward. We also found that the Rho-associated coiled-coil containing protein kinase regulated podosome dynamics. We conclude that E. histolytica spontaneously changes its migration mode as a function of the substrate composition. This adaptive ability might favour E. histolytica's invasion of human colonic tissue. By combining microfluidic experiments, mechanical modelling, and image analysis, our work also introduces a computational pipeline for the study of cell migration.
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Affiliation(s)
- Maria Manich
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
| | - Pascal Bochet
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
| | - Aleix Boquet-Pujadas
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
- École Polytechnique Fédérale de Lausanne, Biomedical Imaging Group, Lausanne, Switzerland
| | - Thierry Rose
- Institut Pasteur, Diagnostic Test Innovation and Development Core Facility Unit, Paris, France
| | - Gertjan Laenen
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
| | - Nancy Guillén
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-ERL9195, Paris, France
| | - Jean-Christophe Olivo-Marin
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
| | - Elisabeth Labruyère
- Institut Pasteur, Université de Paris Cité, Biological Image Analysis Unit, Paris, France
- Centre National de la Recherche Scientifique, CNRS-UMR3691, Paris, France
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Moldenhawer T, Moreno E, Schindler D, Flemming S, Holschneider M, Huisinga W, Alonso S, Beta C. Spontaneous transitions between amoeboid and keratocyte-like modes of migration. Front Cell Dev Biol 2022; 10:898351. [PMID: 36247011 PMCID: PMC9563996 DOI: 10.3389/fcell.2022.898351] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Accepted: 07/18/2022] [Indexed: 01/17/2023] Open
Abstract
The motility of adherent eukaryotic cells is driven by the dynamics of the actin cytoskeleton. Despite the common force-generating actin machinery, different cell types often show diverse modes of locomotion that differ in their shape dynamics, speed, and persistence of motion. Recently, experiments in Dictyostelium discoideum have revealed that different motility modes can be induced in this model organism, depending on genetic modifications, developmental conditions, and synthetic changes of intracellular signaling. Here, we report experimental evidence that in a mutated D. discoideum cell line with increased Ras activity, switches between two distinct migratory modes, the amoeboid and fan-shaped type of locomotion, can even spontaneously occur within the same cell. We observed and characterized repeated and reversible switchings between the two modes of locomotion, suggesting that they are distinct behavioral traits that coexist within the same cell. We adapted an established phenomenological motility model that combines a reaction-diffusion system for the intracellular dynamics with a dynamic phase field to account for our experimental findings.
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Affiliation(s)
- Ted Moldenhawer
- Institute of Physics and Astronomy, University of Potsdam, Potsdam, Germany
| | - Eduardo Moreno
- Department of Physics, Universitat Politècnica de Catalunya, Barcelona, Spain
| | - Daniel Schindler
- Institute of Mathematics, University of Potsdam, Potsdam, Germany
| | - Sven Flemming
- Institute of Physics and Astronomy, University of Potsdam, Potsdam, Germany
| | | | - Wilhelm Huisinga
- Institute of Mathematics, University of Potsdam, Potsdam, Germany
| | - Sergio Alonso
- Department of Physics, Universitat Politècnica de Catalunya, Barcelona, Spain
| | - Carsten Beta
- Institute of Physics and Astronomy, University of Potsdam, Potsdam, Germany
- *Correspondence: Carsten Beta,
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