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Raczyńska ED, Gal JF, Maria PC. Enhanced Basicity of Push-Pull Nitrogen Bases in the Gas Phase. Chem Rev 2016; 116:13454-13511. [PMID: 27739663 DOI: 10.1021/acs.chemrev.6b00224] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Nitrogen bases containing one or more pushing amino-group(s) directly linked to a pulling cyano, imino, or phosphoimino group, as well as those in which the pushing and pulling moieties are separated by a conjugated spacer (C═X)n, where X is CH or N, display an exceptionally strong basicity. The n-π conjugation between the pushing and pulling groups in such systems lowers the basicity of the pushing amino-group(s) and increases the basicity of the pulling cyano, imino, or phosphoimino group. In the gas phase, most of the so-called push-pull nitrogen bases exhibit a very high basicity. This paper presents an analysis of the exceptional gas-phase basicity, mostly in terms of experimental data, in relation with structure and conjugation of various subfamilies of push-pull nitrogen bases: nitriles, azoles, azines, amidines, guanidines, vinamidines, biguanides, and phosphazenes. The strong basicity of biomolecules containing a push-pull nitrogen substructure, such as bioamines, amino acids, and peptides containing push-pull side chains, nucleobases, and their nucleosides and nucleotides, is also analyzed. Progress and perspectives of experimental determinations of GBs and PAs of highly basic compounds, termed as "superbases", are presented and benchmarked on the basis of theoretical calculations on existing or hypothetical molecules.
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Affiliation(s)
- Ewa D Raczyńska
- Department of Chemistry, Warsaw University of Life Sciences (SGGW) , ul. Nowoursynowska 159c, 02-776 Warszawa, Poland
| | - Jean-François Gal
- Institut de Chimie de Nice (ICN) - UMR CNRS 7272, University Nice Sophia Antipolis , Parc Valrose, 06108 Nice Cedex 2, France
| | - Pierre-Charles Maria
- Institut de Chimie de Nice (ICN) - UMR CNRS 7272, University Nice Sophia Antipolis , Parc Valrose, 06108 Nice Cedex 2, France
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Sutradhar D, Zeegers-Huyskens T, Chandra AK. Theoretical study of the interaction between pyridine derivatives and atomic chlorine. Substituent effect and nature of the bonding. Mol Phys 2015. [DOI: 10.1080/00268976.2015.1014440] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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3
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Pines E, Fleming GR. Kinetic Basicities of Aqueous Binary Mixtures: A Surprisingly Good Linear Correlation with the Gas Phase Basicity of the Organic Cosolvent. Isr J Chem 2013. [DOI: 10.1002/ijch.199300022] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Chandra AK, Zeegers-Huyskens T. A theoretical investigation of the interaction between substituted carbonyl derivatives and water: Open or cyclic complexes? J Comput Chem 2012; 33:1131-41. [PMID: 22344933 DOI: 10.1002/jcc.22943] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2011] [Revised: 12/17/2011] [Accepted: 01/08/2012] [Indexed: 02/06/2023]
Affiliation(s)
- Asit K Chandra
- Department of Chemistry, North Eastern Hill University, Shillong 793022, India.
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Parveen S, Chandra AK, Zeegers-Huyskens T. Theoretical investigation of the hydrogen bonding interaction between substituted phenols and simple O- and N-bases. J Mol Struct 2010. [DOI: 10.1016/j.molstruc.2010.06.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Gaffoor F, Ford TA. The vibrational spectra of the boron halides and their molecular complexes Part 10. The complexes of boron trifluoride with ammonia and its methyl derivatives. An ab initio study. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2008; 71:550-558. [PMID: 18304863 DOI: 10.1016/j.saa.2008.01.014] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2007] [Accepted: 01/03/2008] [Indexed: 05/26/2023]
Abstract
Ab initio calculations, at the level of second order Møller-Plesset perturbation theory, and using a triple-zeta Gaussian basis set with polarization and diffuse functions on all atoms, have been carried out on the donor-acceptor complexes of boron trifluoride with ammonia and its mono-, di- and trimethyl derivatives. The structures, interaction energies and vibrational spectra of the complexes have been determined. An eclipsed and a staggered conformer have been examined for each complex, and the preferred conformer was found to be the staggered species in each case. The computed data have been compared with those for some similar complexes containing boron trifluoride and a series of oxygen and sulphur electron donors (water, hydrogen sulphide, methanol, methanethiol, dimethyl ether and dimethyl sulphide) and the effect of successive methyl substitution in all three series has been investigated.
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Affiliation(s)
- Fatima Gaffoor
- Centre for Theoretical and Computational Chemistry, School of Chemistry, University of KwaZulu-Natal, Westville Campus, Private Bag X54001, Durban 4000, South Africa
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El Firdoussi A, Esseffar M, Bouab W, Lamsabhi A, Abboud JLM, Mó O, Yáñez M. Basicity of lactones and cyclic ketones towards I2and ICl. An experimental and theoretical study. NEW J CHEM 2003. [DOI: 10.1039/b305387n] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Gal JF, Maria PC, Raczyńska ED. Thermochemical aspects of proton transfer in the gas phase. JOURNAL OF MASS SPECTROMETRY : JMS 2001; 36:699-716. [PMID: 11473393 DOI: 10.1002/jms.202] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The beginning of the twentieth century saw the development of new theories of acidity and basicity, which are currently well accepted. The thermochemistry of proton transfer in the absence of solvent attracted much interest during this period, because of the fundamental importance of the process. Nevertheless, before the 1950s, few data were available, either from lattice energy evaluations or from calculations using the emerging molecular orbital theory. Advances in mass spectrometry during the last 40 years allowed studies of numerous systems with better accuracy. Thousands of accurate gas-phase acidities or basicities are now available, for simple atomic and molecular systems and for large biomolecules. The intrinsic effect of structure on the Brønsted basic or acidic properties of molecules and the influence of solvents have been unravelled. In this tutorial, the basics of the thermodynamic principles involved are given, and the mass spectrometric techniques are briefly reviewed. Advances in the design and measurements of gas-phase superacids and superbases are described. Recent studies concerning biomolecules are also evoked.
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Affiliation(s)
- J F Gal
- Chimie des Matériaux Organiques et Métalliques, Université de Nice--Sophia Antipolis, 06108 Nice Cedex 2, France.
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Mustanir, Shimada K, Ohta F, Mishima M. Binding Interaction of the Trimethylsilyl Cation with Oxygen and Nitrogen Bases in the Gas Phase. Acetopheones, Benzaldehydes, Pyridines, Anilines, andN,N-Dimethylanilines. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2000. [DOI: 10.1246/bcsj.73.1845] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Density functional calculations on simple carbonyl bases: protonation and hydrogen bond formation with water. Chem Phys 2000. [DOI: 10.1016/s0301-0104(00)00079-3] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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El Hammadi A, El Mouhtadi M. The theoretical determination of heats of formation, proton affinities and gas basicities of N and C -substituted pyrazoles: analysis of the substituent effects on the gas-phase basicity. ACTA ACUST UNITED AC 2000. [DOI: 10.1016/s0166-1280(99)00380-2] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Raczy?ska ED, Decouzon M, Gal JF, Maria PC, Gelbard G, Vielfaure-Joly F. Gas-phase structural (internal) effects in strong organic nitrogen bases. J PHYS ORG CHEM 2000. [DOI: 10.1002/1099-1395(200101)14:1<25::aid-poc332>3.0.co;2-e] [Citation(s) in RCA: 66] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Structural effects on gas-phase reactivities. ACTA ACUST UNITED AC 1999. [DOI: 10.1016/s1874-527x(99)80004-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2023]
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Single-ion transfer properties: a measure of ion-solvation in solvents and solvent mixtures. Electrochim Acta 1998. [DOI: 10.1016/s0013-4686(98)00153-4] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Freitas MA, O'Hair RA. Characterization of an ambident electrophile: the gas phase reactivity of the methoxymethyl cation. ACTA ACUST UNITED AC 1998. [DOI: 10.1016/s0168-1176(98)00126-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Mayer PM, Gal JF, Radom L. The heats of formation, gas-phase acidities, and related thermochemical properties of the third-row hydrides GeH4, AsH3, SeH2 and HBr from G2 ab initio calculations. ACTA ACUST UNITED AC 1997. [DOI: 10.1016/s0168-1176(97)00127-4] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Gorte R, White D, Biaglow A, Farneth W, Šepa J. Reply to the Comments of Dan Farcaşiu in “Solid Acids and Acids in Solution: The Reversible Transfer of Hydrons to Carbonyl Groups”. J Catal 1997. [DOI: 10.1006/jcat.1997.1597] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Substituent effects on the gas-phase basicities of4-x-acetophanes and 4-x-2,6-dimethylacetophenones: a comparison with solution basicities. Tetrahedron 1997. [DOI: 10.1016/s0040-4020(96)01015-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Leopold KR. Partially bonded molecules and their transition to the crystalline state. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/s1087-3295(96)80017-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
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Ijjaali F, Mó O, Yáñez M, Abboud JL. Hybridization effects on the intrinsic basicities of phosphorus and nitrogen containing bases. ACTA ACUST UNITED AC 1995. [DOI: 10.1016/0166-1280(94)04061-v] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Forfar I, Cabildo P, Claramunt RM, Elguero J. Synthesis of 3-(1-Adamantyl)pyrazole and 3,5-Di(1-adamantyl)pyrazole in a Microwave Oven. CHEM LETT 1994. [DOI: 10.1246/cl.1994.2079] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Mishima M, Kang CH, Fujio M, Tsuno Y. Gas Phase Basicities of Styrenes toward Trimethylsilyl Cation. Structure and Stability of Me3Si-Styrene+Complexes. CHEM LETT 1992. [DOI: 10.1246/cl.1992.2439] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Sawada M, Shizuma M, Takai Y, Yamada H, Tanaka T, Okumura Y, Hidaka Y, Hanafusa T, Takahashi S. 1 : 1 Adduct Ion Formation of Simple Carbohydrate Derivatives with Cations Using FAB Mass Spectrometry. Comparison ofO-Acetyl,N-Butyl, andO-Methyl Modifications. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1992. [DOI: 10.1246/bcsj.65.1275] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Mishima M, Kang CH, Fujio M, Tsuno Y. Gas Phase Basicities of Acetophenones toward Trimethylsilyl Cation. CHEM LETT 1992. [DOI: 10.1246/cl.1992.493] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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