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Mikutis G, Deuber CA, Schmid L, Kittilä A, Lobsiger N, Puddu M, Asgeirsson DO, Grass RN, Saar MO, Stark WJ. Silica-Encapsulated DNA-Based Tracers for Aquifer Characterization. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:12142-12152. [PMID: 30277386 DOI: 10.1021/acs.est.8b03285] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Environmental tracing is a direct way to characterize aquifers, evaluate the solute transfer parameter in underground reservoirs, and track contamination. By performing multitracer tests, and translating the tracer breakthrough times into tomographic maps, key parameters such as a reservoir's effective porosity and permeability field may be obtained. DNA, with its modular design, allows the generation of a virtually unlimited number of distinguishable tracers. To overcome the insufficient DNA stability due to microbial activity, heat, and chemical stress, we present a method to encapsulated DNA into silica with control over the particle size. The reliability of DNA quantification is improved by the sample preservation with NaN3 and particle redispersion strategies. In both sand column and unconsolidated aquifer experiments, DNA-based particle tracers exhibited slightly earlier and sharper breakthrough than the traditional solute tracer uranine. The reason behind this observation is the size exclusion effect, whereby larger tracer particles are excluded from small pores, and are therefore transported with higher average velocity, which is pore size-dependent. Identical surface properties, and thus flow behavior, makes the new material an attractive tracer to characterize sandy groundwater reservoirs or to track multiple sources of contaminants with high spatial resolution.
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Affiliation(s)
- Gediminas Mikutis
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
| | - Claudia A Deuber
- Geothermal Energy and Geofluids Group, Department of Earth Sciences , ETH Zurich , Sonneggstrasse 5 , 8092 Zurich , Switzerland
| | - Lucius Schmid
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
| | - Anniina Kittilä
- Geothermal Energy and Geofluids Group, Department of Earth Sciences , ETH Zurich , Sonneggstrasse 5 , 8092 Zurich , Switzerland
| | - Nadine Lobsiger
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
| | - Michela Puddu
- Haelixa AG, Otto-Stern-Weg 7 , 8093 Zurich , Switzerland
| | - Daphne O Asgeirsson
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
| | - Robert N Grass
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
| | - Martin O Saar
- Geothermal Energy and Geofluids Group, Department of Earth Sciences , ETH Zurich , Sonneggstrasse 5 , 8092 Zurich , Switzerland
| | - Wendelin J Stark
- Functional Materials Laboratory, Department of Chemistry and Applied Biosciences , ETH Zurich , Vladimir-Prelog-Weg 1 , 8093 Zurich , Switzerland
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