1
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Nakamura Y, Irisawa K, Makino K, Shimada N. Boronic Acid/Palladium Hybrid Catalysis for Regioselective O-Allylation of Carbohydrates. J Org Chem 2024. [PMID: 38194418 DOI: 10.1021/acs.joc.3c02445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2024]
Abstract
Novel imidazole-containing boronic acid and palladium hybrid catalysis for regioselective O-allylation of carbohydrates has been developed. This catalytic process enables the introduction of a useful allyl functional group into the equatorial hydroxy group of cis-1,2-diols of various carbohydrates with low catalyst loading and excellent regioselectivities. This is the first report on hybrid catalysis in combination with a Lewis base-containing boronic acid and a transition metal complex.
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Affiliation(s)
- Yuki Nakamura
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Kazuma Irisawa
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, Tokyo 156-8550, Japan
| | - Kazuishi Makino
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, Tokyo 156-8550, Japan
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2
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Yamatsugu K, Kanai M. Catalytic Approaches to Chemo- and Site-Selective Transformation of Carbohydrates. Chem Rev 2023; 123:6793-6838. [PMID: 37126370 DOI: 10.1021/acs.chemrev.2c00892] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Carbohydrates are a fundamental unit playing pivotal roles in all the biological processes. It is thus essential to develop methods for synthesizing, functionalizing, and manipulating carbohydrates for further understanding of their functions and the creation of sugar-based functional materials. It is, however, not trivial to develop such methods, since carbohydrates are densely decorated with polar and similarly reactive hydroxy groups in a stereodefined manner. New approaches to chemo- and site-selective transformations of carbohydrates are, therefore, of great significance for revolutionizing sugar chemistry to enable easier access to sugars of interest. This review begins with a brief overview of the innate reactivity of hydroxy groups of carbohydrates. It is followed by discussions about catalytic approaches to enhance, override, or be orthogonal to the innate reactivity for the transformation of carbohydrates. This review avoids making a list of chemo- and site-selective reactions, but rather focuses on summarizing the concept behind each reported transformation. The literature references were sorted into sections based on the underlying ideas of the catalytic approaches, which we hope will help readers have a better sense of the current state of chemistry and develop innovative ideas for the field.
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Affiliation(s)
- Kenzo Yamatsugu
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Motomu Kanai
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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3
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Mukherjee MM, Ghosh R, Hanover JA. Recent Advances in Stereoselective Chemical O-Glycosylation Reactions. Front Mol Biosci 2022; 9:896187. [PMID: 35775080 PMCID: PMC9237389 DOI: 10.3389/fmolb.2022.896187] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/21/2022] [Indexed: 12/26/2022] Open
Abstract
Carbohydrates involving glycoconjugates play a pivotal role in many life processes. Better understanding toward glycobiological events including the structure–function relationship of these biomolecules and for diagnostic and therapeutic purposes including tailor-made vaccine development and synthesis of structurally well-defined oligosaccharides (OS) become important. Efficient chemical glycosylation in high yield and stereoselectivity is however challenging and depends on the fine tuning of a protection profile to get matching glycosyl donor–acceptor reactivity along with proper use of other important external factors like catalyst, solvent, temperature, activator, and additive. So far, many glycosylation methods have been reported including several reviews also. In the present review, we will concentrate our discussion on the recent trend on α- and β-selective glycosylation reactions reported during the past decade.
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Affiliation(s)
- Mana Mohan Mukherjee
- Laboratory of Cell and Molecular Biology, NIDDK, National Institutes of Health, Bethesda, MD, United States
| | - Rina Ghosh
- Department of Chemistry, Jadavpur University, Kolkata, India
- *Correspondence: John A. Hanover, ; Rina Ghosh,
| | - John A. Hanover
- Laboratory of Cell and Molecular Biology, NIDDK, National Institutes of Health, Bethesda, MD, United States
- *Correspondence: John A. Hanover, ; Rina Ghosh,
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4
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Li T, Li T, Zhang Y, Schmidt RR, Peng P. Preparation of Tea Aroma Precursor Glycosides: An Efficient and Sustainable Approach via Chemical Glycosidation. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:2320-2327. [PMID: 35138835 DOI: 10.1021/acs.jafc.1c07043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Tea aroma precursor glycosides are plant-derived natural products with great economic value. However, the preparation of these glycosides remains largely overlooked in the past decades. Herein, we report a mild, efficient, and sustainable chemocatalytic procedure for the production of tea aroma precursor glycosides. During the study of the glycosidation, the catalysts were found to be decisive in the product formation favoring different reaction pathways; in addition, the influence of molecular sieves was elucidated. With regard to these findings, the serious problem of the competing orthoester formation side reaction was successfully overcome with low catalyst loading (1 mol %) and the use of 5 Å molecular sieves, leading to the preparation of a variety of tea aroma precursor β-d-glucopyranosides and β-primeverosides on a gram scale in high yields in an economical way. Taken together, the current approach features catalytic glycosidation with non-toxic and low-cost catalysts, demonstrates highly favorable greenness and sustainability, and promises industrial production of tea aroma precursor glycosides.
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Affiliation(s)
- Tianlu Li
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, Shandong University, Jinan, Shandong 266237, People's Republic of China
| | - Tong Li
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, Shandong University, Jinan, Shandong 266237, People's Republic of China
| | - Youqin Zhang
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, Shandong University, Jinan, Shandong 266237, People's Republic of China
| | - Richard R Schmidt
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
| | - Peng Peng
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, Shandong University, Jinan, Shandong 266237, People's Republic of China
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5
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Nielsen MM, Holmstrøm T, Pedersen CM. Stereoselective
O
‐Glycosylations by Pyrylium Salt Organocatalysis**. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Michael Martin Nielsen
- University of Copenhagen Department of Chemistry Universitetsparken 5 2100 Copenhagen O Denmark
| | - Thomas Holmstrøm
- University of Copenhagen Department of Chemistry Universitetsparken 5 2100 Copenhagen O Denmark
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6
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Slow glycosylation: Activation of trichloroacetimidates under mild conditions using lithium salts and the role of counterions. Carbohydr Res 2022; 511:108497. [DOI: 10.1016/j.carres.2021.108497] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 12/01/2021] [Accepted: 12/28/2021] [Indexed: 11/19/2022]
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7
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Nielsen MM, Holmstrøm T, Pedersen CM. Stereoselective O-Glycosylations by Pyrylium Salt Organocatalysis. Angew Chem Int Ed Engl 2021; 61:e202115394. [PMID: 34847269 DOI: 10.1002/anie.202115394] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Indexed: 01/06/2023]
Abstract
Despite many years of invention, the field of carbohydrate chemistry remains rather inaccessible to non-specialists, which limits the scientific impact and reach of the discoveries made in the field. Aiming to increase the availability of stereoselective glycosylation chemistry for non-specialists, we have discovered that several commercially available pyrylium salts catalyze stereoselective O-glycosylations of a wide range of phenols and alkyl alcohols. This catalytic reaction utilizes trichloroacetimidates, an easily accessible and synthetically proven electrophile, takes place under air and only initiates when all three reagents are mixed, which should provide better reproducibility by non-specialists. The reaction exhibits varying degrees of stereospecificity, resulting in β-selective glycosylations from α-trichloroacetimidates, whilst an α-selective glycosylation proceeds from β-trichloroacetimidates. A mechanistic study revealed that the reaction likely proceeds via an SN 2-like substitution on the protonated electrophile.
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Affiliation(s)
- Michael Martin Nielsen
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Thomas Holmstrøm
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Christian Marcus Pedersen
- University of Copenhagen, Department of Chemistry, Universitetsparken 5, 2100, Copenhagen O, Denmark
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8
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Mała P, Pedersen CM. Self‐Promoted Glycosylation for the Synthesis of β‐
N
‐Glycosyl Sulfonyl Amides. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100808] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Patrycja Mała
- Faculty of Chemistry Adam Mickiewicz University Uniwersytetu Poznańskiego 8 61-614 Poznań Poland
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9
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Li T, Li T, Zhuang H, Wang F, Schmidt RR, Peng P. O-Glycosyl Trichloroacetimidates as Glycosyl Donors and Platinum(IV) Chloride as a Dual Catalyst Permitting Stereo- and Regioselective Glycosidations. ACS Catal 2021. [DOI: 10.1021/acscatal.1c02256] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Tong Li
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate Based Medicine, Shandong University, Qingdao 266237, Shandong, China
| | - Tianlu Li
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate Based Medicine, Shandong University, Qingdao 266237, Shandong, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan 250012, Shandong, China
| | - Haoru Zhuang
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate Based Medicine, Shandong University, Qingdao 266237, Shandong, China
| | - Fengshan Wang
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate Based Medicine, Shandong University, Qingdao 266237, Shandong, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan 250012, Shandong, China
| | - Richard R. Schmidt
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
| | - Peng Peng
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate Based Medicine, Shandong University, Qingdao 266237, Shandong, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan 250012, Shandong, China
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10
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Khanam A, Mandal PK. Direct N-glycosylation of tosyl and nosyl carbamates with trichloroacetimidate donors. NEW J CHEM 2021. [DOI: 10.1039/d1nj02051j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Acidic sulphonamide reactants act as both catalysts and nucleophiles to afford the desired N-glycofuranosyl sulfonamides stereoselectively.
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Affiliation(s)
- Ariza Khanam
- Medicinal & Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram extn, Sitapur Road, P.O. Box 173, Lucknow 226031, India
| | - Pintu Kumar Mandal
- Medicinal & Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram extn, Sitapur Road, P.O. Box 173, Lucknow 226031, India
- Academy of Scientific and Innovative Research, Ghaziabad-201002, India
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11
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Moon S, Chatterjee S, Seeberger PH, Gilmore K. Predicting glycosylation stereoselectivity using machine learning. Chem Sci 2020; 12:2931-2939. [PMID: 34164060 PMCID: PMC8179398 DOI: 10.1039/d0sc06222g] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Predicting the stereochemical outcome of chemical reactions is challenging in mechanistically ambiguous transformations. The stereoselectivity of glycosylation reactions is influenced by at least eleven factors across four chemical participants and temperature. A random forest algorithm was trained using a highly reproducible, concise dataset to accurately predict the stereoselective outcome of glycosylations. The steric and electronic contributions of all chemical reagents and solvents were quantified by quantum mechanical calculations. The trained model accurately predicts stereoselectivities for unseen nucleophiles, electrophiles, acid catalyst, and solvents across a wide temperature range (overall root mean square error 6.8%). All predictions were validated experimentally on a standardized microreactor platform. The model helped to identify novel ways to control glycosylation stereoselectivity and accurately predicts previously unknown means of stereocontrol. By quantifying the degree of influence of each variable, we begin to gain a better general understanding of the transformation, for example that environmental factors influence the stereoselectivity of glycosylations more than the coupling partners in this area of chemical space. A random forest algorithm, trained on a concise dataset and validated experimentally, accurately predicts the stereoselectivity of a complex organic coupling varying all reaction parameters as well as previously unknown mechanistic influences.![]()
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Affiliation(s)
- Sooyeon Moon
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany .,Freie Universität Berlin, Institute of Chemistry and Biochemistry Arnimallee 22 14195 Berlin Germany
| | - Sourav Chatterjee
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Peter H Seeberger
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany .,Freie Universität Berlin, Institute of Chemistry and Biochemistry Arnimallee 22 14195 Berlin Germany
| | - Kerry Gilmore
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
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12
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13
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Nielsen MM, Qiao Y, Wang Y, Pedersen CM. Vessel Effect in C-F Bond Activation Prompts Revised Mechanism and Reveals an Autocatalytic Glycosylation. European J Org Chem 2020. [DOI: 10.1002/ejoc.201901755] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Michael M. Nielsen
- Department of Chemistry; University of Copenhagen; Universitetsparken 5 2100 Copenhagen Denmark
| | - Yan Qiao
- Institute of Coal Chemistry; Chinese Academy of Sciences; 27 South Taiyuan Road 030001 Taiyuan People's Republic of China
| | - Yingxiong Wang
- Institute of Coal Chemistry; Chinese Academy of Sciences; 27 South Taiyuan Road 030001 Taiyuan People's Republic of China
| | - Christian M. Pedersen
- Department of Chemistry; University of Copenhagen; Universitetsparken 5 2100 Copenhagen Denmark
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14
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An eco-friendly N-benzoylglycine/thiourea cooperative catalyzed stereoselective synthesis of β-L-rhamnopyranosides. Carbohydr Res 2019; 487:107887. [PMID: 31830633 DOI: 10.1016/j.carres.2019.107887] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2019] [Revised: 11/19/2019] [Accepted: 12/03/2019] [Indexed: 11/22/2022]
Abstract
A new practical utility for β-stereoselective L-rhamnopyranosylations are conducted using rhamnosyl trichloroacetimidate donors in the presence of N-benzoylglycine/thiourea cooperative catalysis. This method represents the first instance where amino acid derivative N-benzoylglycine is used as a catalyst for β-L-rhamnopyranosylations. This method represents the first instance where environmentally benign amino acid derivative, such as N-benzoylglycine which is reported as less toxic and can be used as efficient catalyst for smooth transformation under eco friendly conditions. On the other hand β-stereoselectivity of rhamnosyl trichloroacetimidate donors protected with O-picoloyl groups at remote positions (C-2 and C-3) has been investigated while the glycosylation reactions of 2-O-picoloyl group substituted l-rhamnosyl donor displays predominant β-stereoselectivity. Reaction proceeded smoothly with moderate to high yield under mild reaction conditions at room temperature with 10 mol% catalyst loadings and tolerant of a wide range of glycoside acceptors.
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15
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Zhu D, Geng M, Yang F, Yu B. Strategies on the construction of 1,2-branched trans-β-glycosidic linkages and their applications in the synthesis of saponins. J Carbohydr Chem 2019. [DOI: 10.1080/07328303.2019.1642345] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Dapeng Zhu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, PR China
| | - Mingyu Geng
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, PR China
| | - Fuzhu Yang
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, PR China
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, PR China
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16
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Abstract
Because of their pivotal biological functions, attention to sugars and glycobiology has grown rapidly in recent decades, leading to increased demand for homogeneous oligosaccharides. The stereoselective preparation of oligosaccharides by chemical means remains challenging and continues to be a vivid research area for organic chemists. In the past decade, new approaches and reinvestigated traditional methods have transformed the field. These developments include novel catalyses, various types of glycosylation modulators and the use of photochemical energy to facilitate glycosylation. This Minireview presents a brief overview of the latest trends in chemical glycosylation, with emphasis on the stereoselective synthetic protocols developed in the past decade.
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Affiliation(s)
- Jesse Ling
- Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA 02155, USA
| | - Clay S Bennett
- Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA 02155, USA
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17
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Nielsen MM, Mała P, Baldursson EÞ, Pedersen CM. Self-promoted and stereospecific formation of N-glycosides. Chem Sci 2019; 10:5299-5307. [PMID: 31191886 PMCID: PMC6540880 DOI: 10.1039/c9sc00857h] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2019] [Accepted: 04/15/2019] [Indexed: 12/20/2022] Open
Abstract
A stereoselective and self-promoted glycosylation for the synthesis of various N-glycosides and glycosyl sulfonamides from trichloroacetimidates is presented.
A stereoselective and self-promoted glycosylation for the synthesis of various N-glycosides and glycosyl sulfonamides from trichloroacetimidates is presented. No additional catalysts or promoters are needed in what is essentially a two-component reaction. When α-glucosyl trichloroacetimidates are employed, the reaction resulted in the stereospecific formation of the corresponding β-N-glucosides in high yields at ambient conditions. On the other hand, when equatorial glucosyl donors were used, the stereospecificity decreased and resulted in a mixture of anomers. By NMR-studies, it was concluded that this decrease in stereospecificity was due to an, until now, unpresented anomerization of the trichloroacetimidate under the very mildly acidic conditions. The mechanism and kinetics of the glycosylations have been studied by NMR-experiments, which gave an insight into the activation of trichloroacetimidates, suggesting an SNi-like mechanism involving ion pairs. The scope of glycosyl donors and sulfonamides was found to be very broad including popular N-protective groups and common glycosyl donors of various reactivity. Peracetylated GlcNAc trichloroacetimidate could be used without the need for any promotors or additives and a tyrosine side chain was glycosylated as an N-glycosyl carbamate. The N-carbamates and the N-sulfonyl groups functioned as orthogonal protective groups of the N-glycoside and hence allowed further N-functionalization without risking mutarotation of the N-glycoside. The N-glycosylation was also performed on a gram scale, without a drop in stereoselectivity nor yield.
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Affiliation(s)
- Michael Martin Nielsen
- Department of Chemistry , University of Copenhagen , Universitetsparken 5 , 2100 Copenhagen O , Denmark .
| | - Patrycja Mała
- Department of Chemistry , University of Copenhagen , Universitetsparken 5 , 2100 Copenhagen O , Denmark . .,Faculty of Chemistry , Adam Mickiewicz University , Umultowska 89b , 61614 Poznań , Poland
| | - Eirikur Þórir Baldursson
- Department of Chemistry , University of Copenhagen , Universitetsparken 5 , 2100 Copenhagen O , Denmark .
| | - Christian Marcus Pedersen
- Department of Chemistry , University of Copenhagen , Universitetsparken 5 , 2100 Copenhagen O , Denmark .
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18
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Affiliation(s)
- Michael Martin Nielsen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark
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19
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Mishra KB, Singh AK, Kandasamy J. Tris(pentafluorophenyl)borane-Promoted Stereoselective Glycosylation with Glycosyl Trichloroacetimidates under Mild Conditions. J Org Chem 2018. [DOI: 10.1021/acs.joc.8b00215] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Kunj Bihari Mishra
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
| | - Adesh Kumar Singh
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
| | - Jeyakumar Kandasamy
- Department of Chemistry, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India
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20
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Podvalnyy NM, Malysheva NN, Panova MV, Zinin AI, Chizhov AO, Orlova AV, Kononov LO. Stereoselective sialylation with O-trifluoroacetylated thiosialosides: hydrogen bonding involved? Carbohydr Res 2017; 451:12-28. [PMID: 28934626 DOI: 10.1016/j.carres.2017.09.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2017] [Revised: 09/05/2017] [Accepted: 09/05/2017] [Indexed: 01/05/2023]
Abstract
A series of novel sialyl donors containing O-trifluoroacetyl (TFA) groups at various positions was synthesized. The choice of protecting groups in sialyl donors was based on hypothesis that variations in ability of different acyl groups to act as hydrogen bond acceptors would influence the supramolecular structure of reaction mixture (solution structure), hence the outcome of sialylation. These glycosyl donors were examined in the model glycosylation of the primary hydroxyl group of 1,2:3,4-di-O-isopropylidene-α-D-galactopyranose in comparison with sialyl donors without O-TFA groups. The presence of O-TFA groups in a sialyl donor strongly affected the outcome of sialylation. Several sialyl donors studied showed promising results: yields of disaccharides can be as high as 86% as can be the stereoselectivities (α/β up to 15:1). The results obtained suggest that varying acyl O-protecting groups in sialyl donor may result in dramatic changes in the outcome of sialylation although further studies are required to dissect the influence of intermolecular hydrogen bonding and intramolecular substituent effects related to variations of electron-withdrawing properties of different acyl groups.
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Affiliation(s)
- Nikita M Podvalnyy
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Nelly N Malysheva
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Maria V Panova
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Alexander I Zinin
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Alexander O Chizhov
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Anna V Orlova
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation
| | - Leonid O Kononov
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky prosp., 47, 119991 Moscow, Russian Federation.
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21
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Peng P, Schmidt RR. Acid-Base Catalysis in Glycosidations: A Nature Derived Alternative to the Generally Employed Methodology. Acc Chem Res 2017; 50:1171-1183. [PMID: 28440624 DOI: 10.1021/acs.accounts.6b00518] [Citation(s) in RCA: 83] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Inverting glycosyltransferases enforce in the active site an intramolecular, acid-base catalyzed glycosidation that, due to proximity of the donor anomeric carbon and the acceptor hydroxyl group, follows an SN2-type reaction. Spacers, tethering donor and acceptor via nonreacting functional groups, led in intramolecular glycosidations to excellent yields and, independent of the donor anomeric configuration, to either the α- or the β-anomer. The requirement of a demanding protecting group pattern confines the application of this efficient method. Only the method where the 2-hydroxyl group of a mannopyranosyl donor is tethered via an acetal spacer to the reacting acceptor functional group is used for β-mannopyranoside synthesis. The most elegant method, tethering donor and acceptor covalently to the spacer via the leaving group and the reacting functional group, was so far not as efficient as hoped. This method is very efficient when donor and acceptor are temporarily assembled through a hydrogen-bond facilitating a stretched hexagon-like transition state. This follows from the stereoselective O-glucopyranosyl trichloroacetimidate transformation into O-glucopyranosyl phosphate with dibenzyl phosphoric acid as acceptor that can be regarded as A═B-C-H acceptor type. Generalizing this concept to the use of alcohols as acceptors requires reversible generation of an A-B-C-H adduct where A-H represents the acceptor (RO-H) and B═C a catalyst that has to fulfill several criteria. Among these criteria are low affinity to nitrogen, avoiding glycosyl donor activation in the absence of acceptor, and high affinity to oxygen in order to generate the A-B-C-H adduct with increased proton acidity. Thus, hydrogen-bond mediated self-assembly of donor and acceptor and concomitant donor activation via a transition state is available, which enforces an acid-base catalyzed SN2-type reaction. It could be shown that PhBF2, Ph2BF, and PhSiF3 are such catalysts that fulfill the desired four functions: reversible adduct formation with the acceptor, hydrogen-bond mediated tethering of this adduct with the donor, and acid- and base-catalysis of the glycosidation. Also Lewis acidic metal salts, particularly the dimeric gold(III) chloride, turned out to exhibit excellent B═C type catalyst properties. Worth mentioning in this context is the ability of gold(III) chloride to regioselectively activate diols. As thioureas have high affinity to anions and also to neutral compounds through strong hydrogen bonds, their binding to alcohols and concomitant activation of O-glycosyl trichloroacetimidates was of interest. Yet, even the acidic N,N'-bis[3,5-bis(trifluoromethyl)phenyl]-thiourea was unable to catalyze glycosidations. However, as a cocatalyst to acids, thiourea exerts a strong effect that, based on NMR studies, leads first to a hydrogen-bond mediated catalyst-cocatalyst-acceptor complex. This complex activates the donor in an intramolecular, acid-base catalyzed reaction that is again closely related to the action of inverting glycosyltransferases. Thus, from O-(α-glycosyl) trichloroacetimidates, good yields of the inversion products, that is, the β-glycosides, are obtained. This novel conceptual approach to glycosidation revealed that for retention of configuration in addition a catalytic nucleophile is required that enables formation of the α-glucoside from the α-trichloroacetimidate. Preliminary studies with a catalyst possessing this 5-fold function, that is, adduct formation with the acceptor, hydrogen-bonding between the reactants, acid and base catalysis, and a catalytic nucleophile as part of a chiral framework supporting facial selection, exhibited good chances for final success in this endeavor.
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Affiliation(s)
- Peng Peng
- National Glycoengineering
Research Center, Shandong Provincial Key Laboratory of Carbohydrate
Chemistry and Glycobiology, Shandong University, Wenhua West Road 44#, Jinan, Shandong 250012, China
| | - Richard R. Schmidt
- Department of Chemistry, University of Konstanz, Fach 725, D-78457 Konstanz, Germany
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Abstract
Glycosylation using Tf2NH or Tf2NTMS as the catalysts and a trichloroacetimidate donor gives glycosides with inverted anomeric stereochemistry.
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Affiliation(s)
- K. Kowalska
- Department of Chemistry
- University of Copenhagen
- Universitetsparken 5
- DK-2100 Copenhagen
- Denmark
| | - C. M. Pedersen
- Department of Chemistry
- University of Copenhagen
- Universitetsparken 5
- DK-2100 Copenhagen
- Denmark
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Peng P, Linseis M, Winter RF, Schmidt RR. Regioselective Acylation of Diols and Triols: The Cyanide Effect. J Am Chem Soc 2016; 138:6002-9. [PMID: 27104625 DOI: 10.1021/jacs.6b02454] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Central topics of carbohydrate chemistry embrace structural modifications of carbohydrates and oligosaccharide synthesis. Both require regioselectively protected building blocks that are mainly available via indirect multistep procedures. Hence, direct protection methods targeting a specific hydroxy group are demanded. Dual hydrogen bonding will eventually differentiate between differently positioned hydroxy groups. As cyanide is capable of various kinds of hydrogen bonding and as it is a quite strong sterically nondemanding base, regioselective O-acylations should be possible at low temperatures even at sterically congested positions, thus permitting formation and also isolation of the kinetic product. Indeed, 1,2-cis-diols, having an equatorial and an axial hydroxy group, benzoyl cyanide or acetyl cyanide as an acylating agent, and DMAP as a catalyst yield at -78 °C the thermodynamically unfavorable axial O-acylation product; acyl migration is not observed under these conditions. This phenomenon was substantiated with 3,4-O-unproteced galacto- and fucopyranosides and 2,3-O-unprotected mannopyranosides. Even for 3,4,6-O-unprotected galactopyranosides as triols, axial 4-O-acylation is appreciably faster than O-acylation of the primary 6-hydroxy group. The importance of hydrogen bonding for this unusual regioselectivity could be confirmed by NMR studies and DFT calculations, which indicate favorable hydrogen bonding of cyanide to the most acidic axial hydroxy group supported by hydrogen bonding of the equatorial hydroxy group to the axial oxygen. Thus, the "cyanide effect" is due to dual hydrogen bonding of the axial hydroxy group which enhances the nucleophilicity of the respective oxygen atom, permitting an even faster reaction for diols than for mono-ols. In contrast, fluoride as a counterion favors dual hydrogen bonding to both hydroxy groups leading to equatorial O-acylation.
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Affiliation(s)
- Peng Peng
- Department of Chemistry, University of Konstanz , D-78457 Konstanz, Germany
| | - Michael Linseis
- Department of Chemistry, University of Konstanz , D-78457 Konstanz, Germany
| | - Rainer F Winter
- Department of Chemistry, University of Konstanz , D-78457 Konstanz, Germany
| | - Richard R Schmidt
- Department of Chemistry, University of Konstanz , D-78457 Konstanz, Germany
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Peng P, Schmidt RR. An Alternative Reaction Course in O-Glycosidation with O-Glycosyl Trichloroacetimidates as Glycosyl Donors and Lewis Acidic Metal Salts as Catalyst: Acid–Base Catalysis with Gold Chloride-Glycosyl Acceptor Adducts. J Am Chem Soc 2015; 137:12653-9. [DOI: 10.1021/jacs.5b07895] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Peng Peng
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
| | - Richard R. Schmidt
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
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Synthesis and thermotropic phase behavior of four glycoglycerolipids. Molecules 2013; 18:13546-73. [PMID: 24189295 PMCID: PMC6270285 DOI: 10.3390/molecules181113546] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2013] [Revised: 10/15/2013] [Accepted: 10/19/2013] [Indexed: 11/16/2022] Open
Abstract
Four glycoglycerolipids with different head groups have been synthesized and their physicochemical properties studied. The lengths of the head groups from a mono-saccharide to a trisaccharide, in addition to the anomeric stereochemistry for the smaller glycoglycerolipids, have been modified. The synthesis has been optimized to avoid glycerol epimerization and to allow up-scaling. The physicochemical properties of the glycoglycerolipids were studied and a strong de-mixing of the gel-phase, depending on the head-group, was observed.
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Yadav JS, Yadav NN, Gupta MK, Srivastava N, Subba Reddy BV. GaCl3-catalyzed activation of alkynyl glycosides for the synthesis of O-glycosides. MONATSHEFTE FUR CHEMIE 2013. [DOI: 10.1007/s00706-013-1091-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Geng Y, Kumar A, Faidallah HM, Albar HA, Mhkalid IA, Schmidt RR. Kooperative Katalyse bei der Glycosidierung mitO-Glycosyltrichloracetimidaten als Glycosyldonoren. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201302158] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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Geng Y, Kumar A, Faidallah HM, Albar HA, Mhkalid IA, Schmidt RR. Cooperative Catalysis in Glycosidation Reactions withO-Glycosyl Trichloroacetimidates as Glycosyl Donors. Angew Chem Int Ed Engl 2013; 52:10089-92. [DOI: 10.1002/anie.201302158] [Citation(s) in RCA: 104] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2013] [Revised: 05/14/2013] [Indexed: 11/06/2022]
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An α-selective, visible light photocatalytic glycosylation of alcohols with selenoglycosides. Carbohydr Res 2013; 369:42-7. [PMID: 23399745 DOI: 10.1016/j.carres.2013.01.004] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2012] [Revised: 01/07/2013] [Accepted: 01/09/2013] [Indexed: 11/23/2022]
Abstract
Exceptionally mild procedures for the visible light photocatalytic activation of selenoglycoside donors in the presence of alcohol acceptors have been developed. This process is demonstrated with both 1-phenylselenyl-2,3,4,6-tetra-O-benzyl glucoside (1) and 1-phenylselenyl-2,3,4,6-tetra-O-benzyl galactoside (2). Catalysis is effected with both metal (Ru(bpy)3) and organocatalysts (diphenyldiselenide). Reactions afford, in all cases, primarily the α-anomers with selectivities that vary with solvent. This represents the first example of a visible light-promoted O-glycosylation.
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