1
|
López-Vidal MG, Lavandera I, Barra JL, Bisogno FR. Thiol-free multicomponent synthesis of non-racemic β-acyloxy thioethers from biocatalytically obtained chiral halohydrins. Org Biomol Chem 2024; 22:1420-1425. [PMID: 38263849 DOI: 10.1039/d3ob01737k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2024]
Abstract
A novel multicomponent chemoenzymatic strategy for the preparation of enantioenriched β-acyloxy thioethers has been developed. This robust methodology employs mild bases, air atmosphere, room temperature and avoids the use of foul-smelling thiols. Instead, potassium thioacetate is employed as a universal sulfur source. This chemoselective strategy tolerates aromatic and aliphatic components and diverse functional groups. The chirality is enzymatically defined by ADH-catalyzed bioreduction of α-haloketones delivering an enantioenriched halohydrin which is one of the three components, and the optical purity remains untouched in the final product. Semipreparative scale multicomponent reaction affords high yield of the products (up to 96%).
Collapse
Affiliation(s)
- Martín G López-Vidal
- Departamento de Química Orgánica. Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, INFIQC-CONICET-UNC, Haya de la Torre y Medina Allende, X5000HUA Córdoba, Argentina.
| | - Iván Lavandera
- Departamento de Química Orgánica e Inorgánica. Universidad de Oviedo, Avenida Julián Clavería 8 33006, Oviedo, Spain
| | - José L Barra
- Departamento de Química Biológica Ranwel Caputto, CIQUIBIC-CONICET-UNC. Facultad de Ciencias Químicas, Universidad Nacional de Córdoba. Ciudad Universitaria, X5000HUA Córdoba, Argentina
| | - Fabricio R Bisogno
- Departamento de Química Orgánica. Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, INFIQC-CONICET-UNC, Haya de la Torre y Medina Allende, X5000HUA Córdoba, Argentina.
| |
Collapse
|
2
|
Huang C, Liu J, Fang J, Jia X, Zheng Z, You S, Qin B. Ketoreductase Catalyzed (Dynamic) Kinetic Resolution for Biomanufacturing of Chiral Chemicals. Front Bioeng Biotechnol 2022; 10:929784. [PMID: 35845398 PMCID: PMC9280296 DOI: 10.3389/fbioe.2022.929784] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 05/16/2022] [Indexed: 11/25/2022] Open
Abstract
Biocatalyzed asymmetric reduction of ketones is an environmentally friendly approach and one of the most cost-effective routes for producing chiral alcohols. In comparison with the well-studied reduction of prochiral ketones to generate chiral alcohols with one chiral center, resolution of racemates by ketoreductases (KREDs) to produce chiral compounds with at least two chiral centers is also an important strategy in asymmetric synthesis. The development of protein engineering and the combination with chemo-catalysts further enhanced the application of KREDs in the efficient production of chiral alcohols with high stereoselectivity. This review discusses the advances in the research area of KRED catalyzed asymmetric synthesis for biomanufacturing of chiral chemicals with at least two chiral centers through the kinetic resolution (KR) approach and the dynamic kinetic resolution (DKR) approach.
Collapse
Affiliation(s)
- Chenming Huang
- Wuya College of Innovation, Shenyang Pharmaceutical University, Shenyang, China
| | - Junling Liu
- Department of Oncology, General Hospital of Northern Theater Command, Shenyang, China
| | - Jiali Fang
- Wuya College of Innovation, Shenyang Pharmaceutical University, Shenyang, China
| | - Xian Jia
- School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, Shenyang, China
| | - Zhendong Zheng
- Department of Oncology, General Hospital of Northern Theater Command, Shenyang, China
| | - Song You
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, Shenyang, China
| | - Bin Qin
- Wuya College of Innovation, Shenyang Pharmaceutical University, Shenyang, China
| |
Collapse
|
3
|
Zhang J, Zhou J, Xu G, Ni Y. Stereodivergent evolution of KpADH for the asymmetric reduction of diaryl ketones with para-substituents. MOLECULAR CATALYSIS 2022. [DOI: 10.1016/j.mcat.2022.112315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
4
|
Riehl PS, Lim J, Finnigan JD, Charnock SJ, Hyster TK. An Efficient Synthesis of the Bicyclic Darunavir Side Chain Using Chemoenzymatic Catalysis. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.2c00017] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Paul S. Riehl
- Cornell University, Department of Chemistry and Chemical Biology, Ithaca New York 14853, United States
| | - Jesmine Lim
- Prozomix, Building 4, West End Ind. Estate, Haltwhistle, NE49 9HA, United Kingdom
| | - James D. Finnigan
- Prozomix, Building 4, West End Ind. Estate, Haltwhistle, NE49 9HA, United Kingdom
| | - Simon J. Charnock
- Prozomix, Building 4, West End Ind. Estate, Haltwhistle, NE49 9HA, United Kingdom
| | - Todd K. Hyster
- Cornell University, Department of Chemistry and Chemical Biology, Ithaca New York 14853, United States
| |
Collapse
|
5
|
Hall M. Enzymatic strategies for asymmetric synthesis. RSC Chem Biol 2021; 2:958-989. [PMID: 34458820 PMCID: PMC8341948 DOI: 10.1039/d1cb00080b] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 05/28/2021] [Indexed: 12/13/2022] Open
Abstract
Enzymes, at the turn of the 21st century, are gaining a momentum. Especially in the field of synthetic organic chemistry, a broad variety of biocatalysts are being applied in an increasing number of processes running at up to industrial scale. In addition to the advantages of employing enzymes under environmentally friendly reaction conditions, synthetic chemists are recognizing the value of enzymes connected to the exquisite selectivity of these natural (or engineered) catalysts. The use of hydrolases in enantioselective protocols paved the way to the application of enzymes in asymmetric synthesis, in particular in the context of biocatalytic (dynamic) kinetic resolutions. After two decades of impressive development, the field is now mature to propose a panel of catalytically diverse enzymes for (i) stereoselective reactions with prochiral compounds, such as double bond reduction and bond forming reactions, (ii) formal enantioselective replacement of one of two enantiotopic groups of prochiral substrates, as well as (iii) atroposelective reactions with noncentrally chiral compounds. In this review, the major enzymatic strategies broadly applicable in the asymmetric synthesis of optically pure chiral compounds are presented, with a focus on the reactions developed within the past decade.
Collapse
Affiliation(s)
- Mélanie Hall
- Institute of Chemistry, University of Graz Heinrichstrasse 28 8010 Graz Austria
- Field of Excellence BioHealth - University of Graz Austria
| |
Collapse
|
6
|
Porey A, Mondal BD, Guin J. Hydrogen-Bonding Assisted Catalytic Kinetic Resolution of Acyclic β-Hydroxy Amides. Angew Chem Int Ed Engl 2021; 60:8786-8791. [PMID: 33368918 DOI: 10.1002/anie.202015004] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 12/21/2020] [Indexed: 01/07/2023]
Abstract
Enantioenriched acyclic α-substituted β-hydroxy amides are valuable compounds in chemical, material and medicinal sciences, but their enantioselective synthesis remains challenging. A catalytic kinetic resolution (KR) of such amides with selectivity factor(s) up to >200 is developed via enantioselective acylation of primary alcohol with N-heterocyclic carbene. An enhanced selectivity for the catalytic KR process is realized using cyclic tertiary amine as base additive. Diastereomeric transition state models for the process are proposed to rationalize the origin of enantioselectivity.
Collapse
Affiliation(s)
- Arka Porey
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata, 700032, India
| | - Bhaskar Deb Mondal
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata, 700032, India
| | - Joyram Guin
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata, 700032, India
| |
Collapse
|
7
|
Porey A, Mondal BD, Guin J. Hydrogen‐Bonding Assisted Catalytic Kinetic Resolution of Acyclic β‐Hydroxy Amides. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202015004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Arka Porey
- School of Chemical Sciences Indian Association for the Cultivation of Science 2A & 2B Raja S. C. Mullick Road Jadavpur, Kolkata 700032 India
| | - Bhaskar Deb Mondal
- School of Chemical Sciences Indian Association for the Cultivation of Science 2A & 2B Raja S. C. Mullick Road Jadavpur, Kolkata 700032 India
| | - Joyram Guin
- School of Chemical Sciences Indian Association for the Cultivation of Science 2A & 2B Raja S. C. Mullick Road Jadavpur, Kolkata 700032 India
| |
Collapse
|
8
|
Hollmann F, Opperman DJ, Paul CE. Biocatalytic Reduction Reactions from a Chemist's Perspective. Angew Chem Int Ed Engl 2021; 60:5644-5665. [PMID: 32330347 PMCID: PMC7983917 DOI: 10.1002/anie.202001876] [Citation(s) in RCA: 84] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Indexed: 11/09/2022]
Abstract
Reductions play a key role in organic synthesis, producing chiral products with new functionalities. Enzymes can catalyse such reactions with exquisite stereo-, regio- and chemoselectivity, leading the way to alternative shorter classical synthetic routes towards not only high-added-value compounds but also bulk chemicals. In this review we describe the synthetic state-of-the-art and potential of enzymes that catalyse reductions, ranging from carbonyl, enone and aromatic reductions to reductive aminations.
Collapse
Affiliation(s)
- Frank Hollmann
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629 HZDelftThe Netherlands
- Department of BiotechnologyUniversity of the Free State205 Nelson Mandela DriveBloemfontein9300South Africa
| | - Diederik J. Opperman
- Department of BiotechnologyUniversity of the Free State205 Nelson Mandela DriveBloemfontein9300South Africa
| | - Caroline E. Paul
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629 HZDelftThe Netherlands
| |
Collapse
|
9
|
Petrovičová T, Gyuranová D, Plž M, Myrtollari K, Smonou I, Rebroš M. Application of robust ketoreductase from Hansenula polymorpha for the reduction of carbonyl compounds. MOLECULAR CATALYSIS 2021. [DOI: 10.1016/j.mcat.2020.111364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
|
10
|
Hollmann F, Opperman DJ, Paul CE. Biokatalytische Reduktionen aus der Sicht eines Chemikers. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202001876] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Frank Hollmann
- Department of Biotechnology Delft University of Technology Van der Maasweg 9 2629 HZ Delft Niederlande
- Department of Biotechnology University of the Free State 205 Nelson Mandela Drive Bloemfontein 9300 Südafrika
| | - Diederik J. Opperman
- Department of Biotechnology University of the Free State 205 Nelson Mandela Drive Bloemfontein 9300 Südafrika
| | - Caroline E. Paul
- Department of Biotechnology Delft University of Technology Van der Maasweg 9 2629 HZ Delft Niederlande
| |
Collapse
|
11
|
Wang Z, Zeng Y, Wu X, Li Z, Tao Y, Yu X, Huang Z, Chen F. Access to chiral α-substituted-β-hydroxy arylphosphonates enabled by biocatalytic dynamic reductive kinetic resolution. Org Biomol Chem 2020; 18:2672-2677. [PMID: 32202289 DOI: 10.1039/d0ob00379d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Ketoreductase (KRED)-catalyzed dynamic reductive kinetic resolution (DYRKR) of α-substituted-β-keto arylphosphonates was developed as a generic and stereoselective approach to synthesize chiral α-substituted-β-hydroxy arylphosphonates, with moderate-to-excellent isolated yield (up to 96%), good-to-excellent diastereoselectivity (up to >99 : <1 dr), and excellent enantioselectivity (up to >99% ee) being achieved.
Collapse
Affiliation(s)
- Zexu Wang
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs, 220 Handan Road, Shanghai, 200433, P. R. China.
| | - Yiping Zeng
- FAFU-UCR Joint Center for Horticultural Biology and Metabolomics, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, P. R. China
| | - Xiaofan Wu
- College of Chemical Engineering, Fuzhou University, 2 Xueyuan Road, Fuzhou, 350116, P. R. China
| | - Zihan Li
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs, 220 Handan Road, Shanghai, 200433, P. R. China.
| | - Yuan Tao
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs, 220 Handan Road, Shanghai, 200433, P. R. China.
| | - Xiaomin Yu
- FAFU-UCR Joint Center for Horticultural Biology and Metabolomics, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, P. R. China
| | - Zedu Huang
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs, 220 Handan Road, Shanghai, 200433, P. R. China.
| | - Fener Chen
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs, 220 Handan Road, Shanghai, 200433, P. R. China.
| |
Collapse
|
12
|
González-Granda S, Costin TA, Sá MM, Gotor-Fernández V. Stereoselective Bioreduction of α-diazo-β-keto Esters. MOLECULES (BASEL, SWITZERLAND) 2020; 25:molecules25040931. [PMID: 32093093 PMCID: PMC7070278 DOI: 10.3390/molecules25040931] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Revised: 02/13/2020] [Accepted: 02/14/2020] [Indexed: 01/01/2023]
Abstract
Diazo compounds are versatile reagents in chemical synthesis and biology due to the tunable reactivity of the diazo functionality and its compatibility with living systems. Much effort has been made in recent years to explore their accessibility and synthetic potential; however, their preparation through stereoselective enzymatic asymmetric synthesis has been scarcely reported in the literature. Alcohol dehydrogenases (ADHs, also called ketoreductases, KREDs) are powerful redox enzymes able to reduce carbonyl compounds in a highly stereoselective manner. Herein, we have developed the synthesis and subsequent bioreduction of nine α-diazo-β-keto esters to give optically active α-diazo-β-hydroxy esters with potential applications as chiral building blocks in chemical synthesis. Therefore, the syntheses of prochiral α-diazo-β-keto esters bearing different substitution patterns at the adjacent position of the ketone group (N3CH2, ClCH2, BrCH2, CH3OCH2, NCSCH2, CH3, and Ph) and in the alkoxy portion of the ester functionality (Me, Et, and Bn), were carried out through the diazo transfer reaction to the corresponding β-keto esters in good to excellent yields (81–96%). After performing the chemical reduction of α-diazo-β-keto esters with sodium borohydride and developing robust analytical conditions to monitor the biotransformations, their bioreductions were exhaustively studied using in-house made Escherichia coli overexpressed and commercially available KREDs. Remarkably, the corresponding α-diazo-β-hydroxy esters were obtained in moderate to excellent conversions (60 to >99%) and high selectivities (85 to >99% ee) after 24 h at 30 °C. The best biotransformations in terms of conversion and enantiomeric excess were successfully scaled up to give the expected chiral alcohols with almost the same activity and selectivity values observed in the enzyme screening experiments.
Collapse
Affiliation(s)
- Sergio González-Granda
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería 8, 33006 Oviedo, Spain;
| | - Taíssa A. Costin
- Chemistry Department, Universidade Federal de Santa Catarina, Florianópolis, SC 88040-900, Brazil;
| | - Marcus M. Sá
- Chemistry Department, Universidade Federal de Santa Catarina, Florianópolis, SC 88040-900, Brazil;
- Correspondence: (M.M.S.); (V.G.-F.)
| | - Vicente Gotor-Fernández
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería 8, 33006 Oviedo, Spain;
- Correspondence: (M.M.S.); (V.G.-F.)
| |
Collapse
|
13
|
Yu J, Li J, Gao X, Zeng S, Zhang H, Liu J, Jiao Q. Dynamic Kinetic Resolution for Asymmetric Synthesis of L-Noncanonical Amino Acids from D-Ser Using Tryptophan Synthase and Alanine Racemase. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901132] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Jinhai Yu
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| | - Jing Li
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| | - Xia Gao
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| | - Shuiyun Zeng
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| | - Hongjuan Zhang
- School of Pharmacy; Nanjing Medical University; 211166 Nanjing China
| | - Junzhong Liu
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| | - Qingcai Jiao
- State Key Laboratory of Pharmaceutical Biotechnology; School of Life Science; Nanjing University; 210093 Nanjing P. R. China
| |
Collapse
|
14
|
Efficient reductive desymmetrization of bulky 1,3-cyclodiketones enabled by structure-guided directed evolution of a carbonyl reductase. Nat Catal 2019. [DOI: 10.1038/s41929-019-0347-y] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
15
|
Barik R, Halder J, Nanda S. Biocatalytic dynamic kinetic reductive resolution with ketoreductase from Klebsiella pneumoniae: the asymmetric synthesis of functionalized tetrahydropyrans. Org Biomol Chem 2019; 17:8571-8588. [PMID: 31517368 DOI: 10.1039/c9ob01681c] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ketoreductase from growing cells of Klebsiella pneumoniae (NBRC 3319) acts as an efficient reagent for converting racemic α-benzyl/cinnamyl substituted-β-ketoesters to the corresponding β-hydroxy esters with excellent yields and stereoselectivities (ee and de >99 %). The reactions described herein followed a biocatalytic dynamic kinetic reductive resolution (DKRR) pathway, which is reported for the first time with such substrates. It was found that the enzyme system can accept substituted mono-aryl rings with different electronic natures. In addition, it also accepts a substituted naphthyl ring and heteroaryl ring in the α-position of the parent β-ketoester. The synthesized enantiopure β-hydroxy esters were then synthetically manipulated to valuable tetrahydropyran building blocks.
Collapse
Affiliation(s)
- Rasmita Barik
- Department of Chemistry, IIT Kharagpur, Kharagpur, 721302, India.
| | | | | |
Collapse
|
16
|
Méndez‐Sánchez D, Mourelle‐Insua Á, Gotor‐Fernández V, Lavandera I. Synthesis of α‐Alkyl‐β‐Hydroxy Amides through Biocatalytic Dynamic Kinetic Resolution Employing Alcohol Dehydrogenases. Adv Synth Catal 2019. [DOI: 10.1002/adsc.201900317] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Daniel Méndez‐Sánchez
- Department of Organic and Inorganic ChemistryUniversity of Oviedo Avenida Julián Clavería 8 33006 Oviedo Spain
- Current address: Department of ChemistryUniversity College London 20 Gordon Street London WC1H 0AJ UK
| | - Ángela Mourelle‐Insua
- Department of Organic and Inorganic ChemistryUniversity of Oviedo Avenida Julián Clavería 8 33006 Oviedo Spain
| | - Vicente Gotor‐Fernández
- Department of Organic and Inorganic ChemistryUniversity of Oviedo Avenida Julián Clavería 8 33006 Oviedo Spain
| | - Iván Lavandera
- Department of Organic and Inorganic ChemistryUniversity of Oviedo Avenida Julián Clavería 8 33006 Oviedo Spain
| |
Collapse
|
17
|
Gu G, Lu J, Yu O, Wen J, Yin Q, Zhang X. Enantioselective and Diastereoselective Ir-Catalyzed Hydrogenation of α-Substituted β-Ketoesters via Dynamic Kinetic Resolution. Org Lett 2018; 20:1888-1892. [DOI: 10.1021/acs.orglett.8b00433] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
18
|
Knaus T, Cariati L, Masman MF, Mutti FG. In vitro biocatalytic pathway design: orthogonal network for the quantitative and stereospecific amination of alcohols. Org Biomol Chem 2018; 15:8313-8325. [PMID: 28936532 DOI: 10.1039/c7ob01927k] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The direct and efficient conversion of alcohols into amines is a pivotal transformation in chemistry. Here, we present an artificial, oxidation-reduction, biocatalytic network that employs five enzymes (alcohol dehydrogenase, NADP-oxidase, catalase, amine dehydrogenase and formate dehydrogenase) in two concurrent and orthogonal cycles. The NADP-dependent oxidative cycle converts a diverse range of aromatic and aliphatic alcohol substrates to the carbonyl compound intermediates, whereas the NAD-dependent reductive aminating cycle generates the related amine products with >99% enantiomeric excess (R) and up to >99% conversion. The elevated conversions stem from the favorable thermodynamic equilibrium (K'eq = 1.88 × 1042 and 1.48 × 1041 for the amination of primary and secondary alcohols, respectively). This biocatalytic network possesses elevated atom efficiency, since the reaction buffer (ammonium formate) is both the aminating agent and the source of reducing equivalents. Additionally, only dioxygen is needed, whereas water and carbonate are the by-products. For the oxidative step, we have employed three variants of the NADP-dependent alcohol dehydrogenase from Thermoanaerobacter ethanolicus and we have elucidated the origin of the stereoselective properties of these variants with the aid of in silico computational models.
Collapse
Affiliation(s)
- Tanja Knaus
- Van't Hoff Institute for Molecular Sciences, HIMS-Biocat, University of Amsterdam, Science Park 904, 1098 XH, The Netherlands.
| | | | | | | |
Collapse
|
19
|
|
20
|
Emmanuel MA, Greenberg NR, Oblinsky DG, Hyster TK. Accessing non-natural reactivity by irradiating nicotinamide-dependent enzymes with light. Nature 2017; 540:414-417. [PMID: 27974767 DOI: 10.1038/nature20569] [Citation(s) in RCA: 213] [Impact Index Per Article: 30.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Accepted: 10/14/2016] [Indexed: 12/25/2022]
Abstract
Enzymes are ideal for use in asymmetric catalysis by the chemical industry, because their chemical compositions can be tailored to a specific substrate and selectivity pattern while providing efficiencies and selectivities that surpass those of classical synthetic methods. However, enzymes are limited to reactions that are found in nature and, as such, facilitate fewer types of transformation than do other forms of catalysis. Thus, a longstanding challenge in the field of biologically mediated catalysis has been to develop enzymes with new catalytic functions. Here we describe a method for achieving catalytic promiscuity that uses the photoexcited state of nicotinamide co-factors (molecules that assist enzyme-mediated catalysis). Under irradiation with visible light, the nicotinamide-dependent enzyme known as ketoreductase can be transformed from a carbonyl reductase into an initiator of radical species and a chiral source of hydrogen atoms. We demonstrate this new reactivity through a highly enantioselective radical dehalogenation of lactones-a challenging transformation for small-molecule catalysts. Mechanistic experiments support the theory that a radical species acts as an intermediate in this reaction, with NADH and NADPH (the reduced forms of nicotinamide adenine nucleotide and nicotinamide adenine dinucleotide phosphate, respectively) serving as both a photoreductant and the source of hydrogen atoms. To our knowledge, this method represents the first example of photo-induced enzyme promiscuity, and highlights the potential for accessing new reactivity from existing enzymes simply by using the excited states of common biological co-factors. This represents a departure from existing light-driven biocatalytic techniques, which are typically explored in the context of co-factor regeneration.
Collapse
Affiliation(s)
- Megan A Emmanuel
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Norman R Greenberg
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Daniel G Oblinsky
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Todd K Hyster
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| |
Collapse
|
21
|
Hanson RL, Guo Z, González-Bobes F, Fenster MD, Goswami A. Enzymatic reduction of α-substituted ketones with concomitant dynamic kinetic resolution. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2016.07.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
|
22
|
Preparation of enantiomerically enriched aromatic β-hydroxynitriles and halohydrins by ketone reduction with recombinant ketoreductase KRED1-Pglu. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.05.027] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
|
23
|
Applegate GA, Berkowitz DB. Exploiting Enzymatic Dynamic Reductive Kinetic Resolution (DYRKR) in Stereocontrolled Synthesis. Adv Synth Catal 2015; 357:1619-1632. [PMID: 26622223 PMCID: PMC4662550 DOI: 10.1002/adsc.201500316] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Over the past two decades, the domains of both frontline synthetic organic chemistry and process chemistry and have seen an increase in crosstalk between asymmetric organic/organometallic approaches and enzymatic approaches to stereocontrolled synthesis. This review highlights the particularly auspicious role for dehydrogenase enzymes in this endeavor, with a focus on dynamic reductive kinetic resolutions (DYRKR) to "deracemize" building blocks, often setting two stereocenters in so doing. The scope and limitations of such dehydrogenase-mediated processes are overviewed, as are future possibilities for the evolution of enzymatic DYRKR.
Collapse
Affiliation(s)
| | - David B. Berkowitz
- Department of Chemistry, University of Nebraska, Lincoln, NE 68588-0304 USA
| |
Collapse
|
24
|
Biotransformation of aromatic ketones and ketoesters with the non-conventional yeast Pichia glucozyma. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.10.133] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
25
|
Xia B, Li Y, Cheng G, Lin X, Wu Q. Lipase-Catalyzed Doubly Enantioselective Ring-Opening Resolution between Alcohols and Lactones: Synthesis of Chiral Hydroxyl Esters with Two Stereogenic Centers. ChemCatChem 2014. [DOI: 10.1002/cctc.201402672] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
26
|
Das D, Halder J, Bhuniya R, Nanda S. Stereoselective Synthesis of Enantiopure Oxetanes, a Carbohydrate Mimic, an ϵ-Lactone, and Cyclitols from Biocatalytically Derived β-Hydroxy Esters as Chiral Precursors. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402521] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
27
|
Kędziora K, Bisogno FR, Lavandera I, Gotor-Fernández V, Montejo-Bernardo J, García-Granda S, Kroutil W, Gotor V. Expanding the Scope of Alcohol Dehydrogenases towards Bulkier Substrates: Stereo- and Enantiopreference for α,α-Dihalogenated Ketones. ChemCatChem 2014. [DOI: 10.1002/cctc.201300834] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
28
|
Martínez-Castañeda Á, Kędziora K, Lavandera I, Rodríguez-Solla H, Concellón C, del Amo V. Highly enantioselective synthesis of α-azido-β-hydroxy methyl ketones catalyzed by a cooperative proline–guanidinium salt system. Chem Commun (Camb) 2014; 50:2598-600. [DOI: 10.1039/c3cc49371g] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
29
|
Rodríguez C, Borzęcka W, Sattler JH, Kroutil W, Lavandera I, Gotor V. Steric vs. electronic effects in the Lactobacillus brevis ADH-catalyzed bioreduction of ketones. Org Biomol Chem 2014; 12:673-81. [DOI: 10.1039/c3ob42057d] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
30
|
Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium spp. Reveal the Molecular Basis for Their Recognition of ‘Bulky–Bulky’ Ketones. Top Catal 2013. [DOI: 10.1007/s11244-013-0191-2] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
31
|
Nagoya-Goldmedaille: B. L. Feringa / Nagoya-Silbermedaille: N. Chatani / MacArthur Fellowship: Phil S. Baran / Ehrendoktorwürde: R. Kniep / Herty Medal: D. G. Lynn / Premio de la Real Academia de Ciencias: V. Gotor / Akademiepreis für Chemie: M. Alcarazo. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201307536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
32
|
Nagoya Gold Medal: B. L. Feringa / Nagoya Silver Medal: N. Chatani / MacArthur Fellowship: Phil S. Baran / Honorary Doctorate: R. Kniep / Herty Medal: D. G. Lynn / Premio de la Real Academia de Ciencias: V. Gotor / Akademiepreis für Chemie: M. Alcarazo /. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/anie.201307536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
33
|
Paul CE, Lavandera I, Gotor-Fernández V, Kroutil W, Gotor V. Escherichia coli/ADH-A: An All-Inclusive Catalyst for the Selective Biooxidation and Deracemisation of Secondary Alcohols. ChemCatChem 2013. [DOI: 10.1002/cctc.201300409] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
34
|
Mangas-Sánchez J, Busto E, Gotor V, Gotor-Fernández V. One-Pot Synthesis of Enantiopure 3,4-Dihydroisocoumarins through Dynamic Reductive Kinetic Resolution Processes. Org Lett 2013; 15:3872-5. [DOI: 10.1021/ol401606x] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Juan Mangas-Sánchez
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería s/n. Oviedo 33006, Spain
| | - Eduardo Busto
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería s/n. Oviedo 33006, Spain
| | - Vicente Gotor
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería s/n. Oviedo 33006, Spain
| | - Vicente Gotor-Fernández
- Organic and Inorganic Chemistry Department, University of Oviedo, Avenida Julián Clavería s/n. Oviedo 33006, Spain
| |
Collapse
|
35
|
Borzęcka W, Lavandera I, Gotor V. Synthesis of Enantiopure Fluorohydrins Using Alcohol Dehydrogenases at High Substrate Concentrations. J Org Chem 2013; 78:7312-7. [DOI: 10.1021/jo400962c] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Wioleta Borzęcka
- Departamento de Química Orgánica e Inorgánica, University of Oviedo, C/Julián Clavería
8, 33006 Oviedo, Spain
| | - Iván Lavandera
- Departamento de Química Orgánica e Inorgánica, University of Oviedo, C/Julián Clavería
8, 33006 Oviedo, Spain
| | - Vicente Gotor
- Departamento de Química Orgánica e Inorgánica, University of Oviedo, C/Julián Clavería
8, 33006 Oviedo, Spain
| |
Collapse
|
36
|
Lerchner A, Jarasch A, Meining W, Schiefner A, Skerra A. Crystallographic analysis and structure-guided engineering of NADPH-dependent Ralstonia sp. alcohol dehydrogenase toward NADH cosubstrate specificity. Biotechnol Bioeng 2013; 110:2803-14. [PMID: 23686719 DOI: 10.1002/bit.24956] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2013] [Revised: 04/21/2013] [Accepted: 04/29/2013] [Indexed: 11/10/2022]
Abstract
The NADP⁺-dependent alcohol dehydrogenase from Ralstonia sp. (RasADH) belongs to the protein superfamily of short-chain dehydrogenases/reductases (SDRs). As an enzyme that accepts different types of substrates--including bulky-bulky as well as small-bulky secondary alcohols or ketones--with high stereoselectivity, it offers potential as a biocatalyst for industrial biotechnology. To understand substrate and cosubstrate specificities of RasADH we determined the crystal structure of the apo-enzyme as well as its NADP⁺-bound state with resolutions down to 2.8 Å. RasADH displays a homotetrameric quaternary structure that can be described as a dimer of homodimers while in each subunit a seven-stranded parallel β-sheet, flanked by three α-helices on each side, forms a Rossmann fold-type dinucleotide binding domain. Docking of the well-known substrate (S)-1-phenylethanol clearly revealed the structural determinants of stereospecificity. To favor practical RasADH application in the context of established cofactor recycling systems, for example, those involving an NADH-dependent amino acid dehydrogenase, we attempted to rationally change its cosubstrate specificity from NADP⁺ to NAD⁺ utilizing the structural information that NADP⁺ specificity is largely governed by the residues Asn15, Gly37, Arg38, and Arg39. Furthermore, an extensive sequence alignment with homologous dehydrogenases that have different cosubstrate specificities revealed a modified general SDR motif ASNG (instead of NNAG) at positions 86-89 of RasADH. Consequently, we constructed mutant enzymes with one (G37D), four (N15G/G37D/R38V/R39S), and six (N15G/G37D/R38V/R39S/A86N/S88A) amino acid exchanges. RasADH (N15G/G37D/R38V/R39S) was better able to accept NAD⁺ while showing much reduced catalytic efficiency with NADP⁺, leading to a change in NADH/NADPH specificity by a factor of ∼3.6 million.
Collapse
Affiliation(s)
- Alexandra Lerchner
- Munich Center for Integrated Protein Science, CIPS-M, and Lehrstuhl für Biologische Chemie, Technische Universität München, 85350, Freising-Weihenstephan, Germany
| | | | | | | | | |
Collapse
|
37
|
|
38
|
Cuetos A, Lavandera I, Gotor V. Expanding dynamic kinetic protocols: transaminase-catalyzed synthesis of α-substituted β-amino ester derivatives. Chem Commun (Camb) 2013; 49:10688-90. [DOI: 10.1039/c3cc46760k] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
|