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Das B, Tk Baidya A, Chakrabarti S, Chouhan D, Thakur B, Darreh-Shori T, Chen G, Tiwari V, Kumar R. Synthesis and biological evaluation of Halogen-Substituted novel α-Ketoamides as potential protein aggregation modulators in Alzheimer's disease. Bioorg Chem 2024; 147:107373. [PMID: 38653149 DOI: 10.1016/j.bioorg.2024.107373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 04/01/2024] [Accepted: 04/12/2024] [Indexed: 04/25/2024]
Abstract
The escalating prevalence of Alzheimer's disease (AD) has prompted extensive research into potential therapeutic interventions, with a specific focus on molecular targets such as amyloid beta (Aβ) and tau protein aggregation. In this study, a series of α-ketoamide derivatives was synthesized from β,γ-unsaturated α-keto thioesters, achieving high purity and good yield. Thioflavin T based Aβ aggregation assay identified four promising compounds (BD19, BD23, BD24, and BD27) that demonstrated significant inhibitory effects on Aβ aggregation. BD23, selected for its better solubility (0.045 ± 0.0012 mg/ml), was further subjected to in vitro Parallel Artificial Membrane Permeability Assay to determine the Blood-Brain-Barrier permeability and emerged as BBB permeable with permeability rate (Pe) of 10.66 ± 8.11 × 10-6 cm/s. In addition to its Aβ inhibitory properties, BD23 exhibited significant inhibition of heparin-induced tau aggregation and demonstrated non-toxicity in SHSY5Y cell lines. Subsequent in vivo assays were conducted, administering compound BD23 to an Aβ induced mouse model of AD at various doses (1, 2, & 5 mg/kg). The results revealed a noteworthy enhancement in cognitive functions, particularly when BD23 was administered at a dosage of 5 mg/kg, comparable to the effects observed with the standard dose of Donepezil (DNP). In silico investigations, including molecular docking, molecular dynamics simulations, and Density Functional Theory calculations provided insights into BD23's interactions with the targets and electronic properties. These analyses contribute to the understanding of the therapeutic potential of the lead compounds BD23 which further pave the way for further exploration of its therapeutic potential in the context of AD.
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Affiliation(s)
- Bhanuranjan Das
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India
| | - Anurag Tk Baidya
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India
| | - Sourabh Chakrabarti
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India
| | - Deepak Chouhan
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India
| | - Banita Thakur
- Division of Clinical Geriatric, Center for Alzheimer Research, Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, NEO, 7th Floor, 141 52 Stockholm, Sweden
| | - Taher Darreh-Shori
- Division of Clinical Geriatric, Center for Alzheimer Research, Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, NEO, 7th Floor, 141 52 Stockholm, Sweden
| | - Gefei Chen
- Department of Biosciences and Nutrition, Karolinska Institutet, 14 183, Huddinge, Sweden
| | - Vinod Tiwari
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India
| | - Rajnish Kumar
- Department of Pharmaceutical Engineering & Technology, Indian Institute of Technology (B.H.U.), Varanasi 221005 U.P., India.
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Saha J, Banerjee S, Malo S, Das AK, Das I. A Torquoselective Thermal 6π-Electrocyclization Approach to 1,4-Cyclohexadienes via Solvent-Aided Proton Transfer: Experimental and Theoretical Studies. Chemistry 2024; 30:e202304009. [PMID: 38179806 DOI: 10.1002/chem.202304009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Revised: 12/26/2023] [Accepted: 01/05/2024] [Indexed: 01/06/2024]
Abstract
The thermal 6π-electrocyclization of hexatriene typically delivers 1,3-cyclohexadiene (1,3-CHD). However, there is only limited success in directly synthesizing 1,4-cyclohexadiene (1,4-CHD) using such an approach, probably due to the difficulty in realizing thermally-forbidden 1,3-hydride shift after electrocyclic ring closure. The present study shows that by heating (2E,4E,6E)-hexatrienes bearing ester or ketone substituents at the C1-position in a mixture of toluene/MeOH or EtOH (2 : 1) solvents at 90-100 °C, 1,4-CHDs can be selectively synthesized. This is achieved through a torquoselective disrotatory 6π-electrocyclic ring closure followed by a proton-transfer process. The success of this method depends on the polar protic solvent-assisted intramolecular proton transfer from 1,3-CHD to 1,4-CHD, which has been confirmed by deuterium-labeling experiments. There are no reports to date for such a solvent-assisted isomerization. Density functional theory (DFT) studies have suggested that forming 1,3-CHD and subsequent isomerization is a thermodynamically feasible process, regardless of the functional groups involved. Two possible successive polar solvent-assisted proton-transfer pathways have been identified for isomerization.
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Affiliation(s)
- Jayanta Saha
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical BiologyJadavpur, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Soumadip Banerjee
- School of Mathematical and Computational Sciences, Indian Association for the Cultivation of Science Jadavpur, Kolkata, 700032, India
| | - Sidhartha Malo
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical BiologyJadavpur, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Abhijit Kumar Das
- School of Mathematical and Computational Sciences, Indian Association for the Cultivation of Science Jadavpur, Kolkata, 700032, India
| | - Indrajit Das
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical BiologyJadavpur, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
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Das A, Thomas KRJ. Tuning Selectivity in the Visible-Light-Promoted Coupling of Thiols with Alkenes by EDA vs TOCO Complex Formation. ACS OMEGA 2023; 8:18275-18289. [PMID: 37251145 PMCID: PMC10210280 DOI: 10.1021/acsomega.3c02070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 04/25/2023] [Indexed: 05/31/2023]
Abstract
The visible-light-promoted catalyst-free condition has been demonstrated for self- and cross-coupling reactions of thiols in an ambient atmosphere. Further, synthesis of β-hydroxysulfides is accomplished under very mild conditions involving the formation of an electron donor-acceptor (EDA) complex between a disulfide and an alkene. However, the direct reaction of thiol with alkene via the formation of a thiol-oxygen co-oxidation (TOCO) complex failed to produce the desired compounds in high yields. The protocol was successful with several aryl and alkyl thiols for the formation of disulfides. However, the formation of β-hydroxysulfides required an aromatic unit on the disulfide fragment, which supports the formation of the EDA complex during the course of the reaction. The approaches presented in this paper for the coupling reaction of thiols and the synthesis of β-hydroxysulfides are unique and do not require toxic organic or metal catalysts.
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Das B, Baidya ATK, Devi B, Rom T, Paul AK, Thakur B, Darreh-Shori T, Kumar R. Synthesis, single crystal X-ray, DFT, spectroscopic, molecular docking studies and in vitro biological evaluation of compound N-benzyl-4-(4-chlorophenyl)-2-oxobutanamide. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Naskar S, Mal K, Maity R, Das I. Recent Advances in the Synthesis and Applications of α‐Ketothioesters. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202001191] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Sandip Naskar
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Kanchan Mal
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Rajib Maity
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Indrajit Das
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
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Bankura A, Saha J, Maity R, Das I. Non‐Bonding 1,4‐Sulphur‐Oxygen Interaction Governs the Reactivity of α‐Ketothioesters in Triphenylphosphine‐Catalyzed Cyclization with Acetylenedicarboxylates. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202001376] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Abhijit Bankura
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Jayanta Saha
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Rajib Maity
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Indrajit Das
- Organic and Medicinal Chemistry Division CSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
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Bankura A, Naskar S, Roy Chowdhury S, Maity R, Mishra S, Das I. C
3
‐Thioester/‐Ester Substituted Linear Dienones: A Pluripotent Molecular Platform for Diversification via Cascade Pericyclic Reactions. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000362] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Abhijit Bankura
- Organic and Medicinal Chemistry DivisionCSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Sandip Naskar
- Organic and Medicinal Chemistry DivisionCSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Sabyasachi Roy Chowdhury
- Department of ChemistryIndian Institute of Technology Kharagpur Kharagpur West Bengal 721 302 India
| | - Rajib Maity
- Organic and Medicinal Chemistry DivisionCSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Sabyashachi Mishra
- Department of ChemistryIndian Institute of Technology Kharagpur Kharagpur West Bengal 721 302 India
| | - Indrajit Das
- Organic and Medicinal Chemistry DivisionCSIR-Indian Institute of Chemical Biology 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
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8
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Jafarpour F, Azizzade M, Golpazir-Sorkheh Y, Navid H, Rajai-Daryasarei S. Divergent Synthesis of α-Aroyloxy Ketones and Indenones: A Controlled Domino Radical Reaction for Di- and Trifunctionalization of Alkynes. J Org Chem 2020; 85:8287-8294. [DOI: 10.1021/acs.joc.0c00967] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Farnaz Jafarpour
- School of Chemistry, College of Science, University of Tehran, Tehran 14155-6619, Iran
| | - Meysam Azizzade
- School of Chemistry, College of Science, University of Tehran, Tehran 14155-6619, Iran
| | | | - Hamed Navid
- School of Chemistry, College of Science, University of Tehran, Tehran 14155-6619, Iran
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Rysak V, Dixit R, Trivelli X, Merle N, Agbossou-Niedercorn F, Vanka K, Michon C. Catalytic reductive deoxygenation of esters to ethers driven by hydrosilane activation through non-covalent interactions with a fluorinated borate salt. Catal Sci Technol 2020. [DOI: 10.1039/d0cy00775g] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A fluorinated borate BArF salt catalyses the reductive deoxygenation of esters to ethers by using hydrosilanes. Experimental and theoretical studies highlight the role of noncovalent interactions in the reaction mechanism.
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Affiliation(s)
- Vincent Rysak
- Univ. Lille
- CNRS
- Centrale Lille
- Univ. Artois
- UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide
| | - Ruchi Dixit
- Physical and Material Chemistry Division
- CSIR-National Chemical Laboratory
- Pune 411008
- India
- Academy of Scientific and Innovative Research (AcSIR)
| | | | - Nicolas Merle
- Univ. Lille
- CNRS
- Centrale Lille
- Univ. Artois
- UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide
| | | | - Kumar Vanka
- Physical and Material Chemistry Division
- CSIR-National Chemical Laboratory
- Pune 411008
- India
| | - Christophe Michon
- Univ. Lille
- CNRS
- Centrale Lille
- Univ. Artois
- UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide
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10
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Saha J, Das I. Solvent Dependent Divergent Reactivity of Electron‐Rich Dienones with and without Visible Light: Access to Cyclopropanated Furans and Butenolides. Adv Synth Catal 2019. [DOI: 10.1002/adsc.201901273] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Jayanta Saha
- CSIR-Indian Institute of Chemical Biology and Academy of Scientific and Innovative Research (AcSIR) Organic and Medicinal Chemistry Division, 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
| | - Indrajit Das
- CSIR-Indian Institute of Chemical Biology and Academy of Scientific and Innovative Research (AcSIR) Organic and Medicinal Chemistry Division, 4, Raja S. C. Mullick Road, Jadavpur Kolkata 700 032 India
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