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Kesharwani K, Singh R, Tripathi SK, Kaul G, Akhir A, Saxena D, Kumar V, Mishra NK, Chopra S, Joshi KB. Antimicrobial Activity of Silver Nanoparticles Loaded Biomimetic Isomeric Short Lipopeptide Nanostructures. ChemistrySelect 2022. [DOI: 10.1002/slct.202202234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Khushboo Kesharwani
- Department of Chemistry School of Chemical Science and Technology Dr. Harisingh Gour Vishwavidyalaya (A Central University) Sagar MP 470003 India
| | - Ramesh Singh
- Department of Chemistry School of Chemical Science and Technology Dr. Harisingh Gour Vishwavidyalaya (A Central University) Sagar MP 470003 India
| | - Satyendra Kumar Tripathi
- Department of Chemistry School of Chemical Science and Technology Dr. Harisingh Gour Vishwavidyalaya (A Central University) Sagar MP 470003 India
| | - Grace Kaul
- Department of Microbiology CSIR-Central Drug Research Institute Sitapur Road, Janakipuram Extension Lucknow India
- AcSIR: Academy of Scientific and Innovative Research (AcSIR) Ghaziabad 201002 India
| | - Abdul Akhir
- Department of Microbiology CSIR-Central Drug Research Institute Sitapur Road, Janakipuram Extension Lucknow India
| | - Deepanshi Saxena
- Department of Microbiology CSIR-Central Drug Research Institute Sitapur Road, Janakipuram Extension Lucknow India
| | - Vikas Kumar
- Department of Chemistry Indian Institute of Science Bengaluru Karnataka India
| | | | - Sidharth Chopra
- Department of Microbiology CSIR-Central Drug Research Institute Sitapur Road, Janakipuram Extension Lucknow India
- AcSIR: Academy of Scientific and Innovative Research (AcSIR) Ghaziabad 201002 India
| | - Khashti Ballabh Joshi
- Department of Chemistry School of Chemical Science and Technology Dr. Harisingh Gour Vishwavidyalaya (A Central University) Sagar MP 470003 India
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Tripathi SK, Kesharwani K, Kaul G, Akhir A, Saxena D, Singh R, Mishra NK, Pandey A, Chopra S, Joshi KB. Amyloid-β Inspired Short Peptide Amphiphile Facilitates Synthesis of Silver Nanoparticles as Potential Antibacterial Agents. ChemMedChem 2022; 17:e202200251. [PMID: 35684988 DOI: 10.1002/cmdc.202200251] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 06/06/2022] [Indexed: 11/11/2022]
Abstract
An amyloid-β inspired biocompatible short peptide amphiphile (sPA) molecule was used for controlled and targeted delivery of bioactive silver nanoparticles via transforming sPA nanostructures. Such sPA-AgNPs hybrid structures can be further used to develop antibacterial materials to combat emerging bacterial resistance. Due to the excellent antibacterial activity of silver, the growth of clinically relevant bacteria was inhibited in the presence of AgNPs-sPA hybrids. Bacterial tests demonstrated that the high biocompatibility and low cytotoxicity of the designed sPA allow it to work as a model drug delivery agent. It therefore shows great potential in locally addressing bacterial infections. The results of our study suggest that these nanodevices have the potential to trap and then engage in the facile delivery of their chemical payload at the target site, thereby working as potential delivery materials. This system has potential therapeutic value for the treatment of microbiota triggered progression of neurodegenerative diseases.
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Affiliation(s)
- Satyendra K Tripathi
- Department of Chemistry, School of Chemical Science and Technology, Dr.Harisingh Gour Vishwavidyalaya (A Central University), Sagar, MP, 470003, India
| | - Khushboo Kesharwani
- Department of Chemistry, School of Chemical Science and Technology, Dr.Harisingh Gour Vishwavidyalaya (A Central University), Sagar, MP, 470003, India
| | - Grace Kaul
- Department of Microbiology, CSIR-Central Drug Research Institute, Sitapur Road, Janakipuram Extension, Lucknow, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Abdul Akhir
- Department of Microbiology, CSIR-Central Drug Research Institute, Sitapur Road, Janakipuram Extension, Lucknow, India
| | - Deepanshi Saxena
- Department of Microbiology, CSIR-Central Drug Research Institute, Sitapur Road, Janakipuram Extension, Lucknow, India
| | - Ramesh Singh
- Department of Chemistry, School of Chemical Science and Technology, Dr.Harisingh Gour Vishwavidyalaya (A Central University), Sagar, MP, 470003, India
| | - Narendra K Mishra
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen, Denmark
| | - Archna Pandey
- Department of Chemistry, School of Chemical Science and Technology, Dr.Harisingh Gour Vishwavidyalaya (A Central University), Sagar, MP, 470003, India
| | - Sidharth Chopra
- Department of Microbiology, CSIR-Central Drug Research Institute, Sitapur Road, Janakipuram Extension, Lucknow, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Khashti B Joshi
- Department of Chemistry, School of Chemical Science and Technology, Dr.Harisingh Gour Vishwavidyalaya (A Central University), Sagar, MP, 470003, India
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Gong J, Eom T, Lee W, Roy A, Kwon S, Kim H, Lee H. Self‐Assembly of a β‐Peptide Foldamer: The Role of the Surfactant in Three‐Dimensional Shape Selection. Chempluschem 2019; 84:481-487. [DOI: 10.1002/cplu.201900027] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Revised: 04/15/2019] [Indexed: 12/12/2022]
Affiliation(s)
- Jintaek Gong
- Department of ChemistryKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
| | - Taedaehyeong Eom
- Graduate School of EEWSKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
| | - Wonchul Lee
- Department of ChemistryKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
| | - Arup Roy
- Department of ChemistryKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
- Current address: Chemical Sciences and Technology DivisionCSIR-North East Institute of Science and Technology Pulibor, Jorhat Assam 785006 India
| | - Sunbum Kwon
- Department of ChemistryChung-Ang University 84 Heukseok-ro, Dongjak-gu Seoul 06974 Republic of Korea
| | - Hyungjun Kim
- Department of ChemistryKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
| | - Hee‐Seung Lee
- Department of ChemistryKAIST 291 Daehak-ro, Yuseong-gu Daejeon 34141 Republic of Korea
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Mándity IM, Nekkaa I, Paragi G, Fülöp F. Homochirality of β-Peptides: A Significant Biomimetic Property of Unnatural Systems. ChemistryOpen 2017; 6:492-496. [PMID: 28794942 PMCID: PMC5542748 DOI: 10.1002/open.201700078] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Indexed: 01/10/2023] Open
Abstract
Homochirality, an interesting phenomenon of life, is mainly an unresolved problem and was thought to be a property of living matter. Herein, we show that artificial β-peptides have the tendency toward homochiral diastereoselective chain elongation. Chain-length-dependent stereochemical discrimination was investigated in the synthesis of foldamers with various side chains and secondary structures. It was found that there is a strong tendency toward the synthesis of homochiral oligomers. The size of the side chain drastically influenced the selectivity of the stereodiscriminative chain-elongation reaction. It is noteworthy that water as the co-solvent increases the selectivity. Such behavior is a novel fundamental biomimetic property of foldamers with a potential of future industrial application.
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Affiliation(s)
- István M. Mándity
- Institute of Pharmaceutical ChemistryUniversity of SzegedEötvös u. 66720SzegedHungary
| | - Imane Nekkaa
- Institute of Pharmaceutical ChemistryUniversity of SzegedEötvös u. 66720SzegedHungary
| | - Gábor Paragi
- MTA-SZTE Supramolecular and Nanostructured Materials Research GroupDóm tér 86720SzegedHungary
| | - Ferenc Fülöp
- Institute of Pharmaceutical ChemistryUniversity of SzegedEötvös u. 66720SzegedHungary
- Research Group of Stereochemistry of the Hungarian Academy of SciencesDóm tér 86720SzegedHungary
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Olajos G, Hetényi A, Wéber E, Németh LJ, Szakonyi Z, Fülöp F, Martinek TA. Induced folding of protein-sized foldameric β-sandwich models with core β-amino acid residues. Chemistry 2015; 21:6173-80. [PMID: 25677195 DOI: 10.1002/chem.201405581] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2014] [Indexed: 01/27/2023]
Abstract
The mimicry of protein-sized β-sheet structures with unnatural peptidic sequences (foldamers) is a considerable challenge. In this work, the de novo designed betabellin-14 β-sheet has been used as a template, and α→β residue mutations were carried out in the hydrophobic core (positions 12 and 19). β-Residues with diverse structural properties were utilized: Homologous β(3) -amino acids, (1R,2S)-2-aminocyclopentanecarboxylic acid (ACPC), (1R,2S)-2-aminocyclohexanecarboxylic acid (ACHC), (1R,2S)-2-aminocyclohex-3-enecarboxylic acid (ACEC), and (1S,2S,3R,5S)-2-amino-6,6-dimethylbicyclo[3.1.1]heptane-3-carboxylic acid (ABHC). Six α/β-peptidic chains were constructed in both monomeric and disulfide-linked dimeric forms. Structural studies based on circular dichroism spectroscopy, the analysis of NMR chemical shifts, and molecular dynamics simulations revealed that dimerization induced β-sheet formation in the 64-residue foldameric systems. Core replacement with (1R,2S)-ACHC was found to be unique among the β-amino acid building blocks studied because it was simultaneously able to maintain the interstrand hydrogen-bonding network and to fit sterically into the hydrophobic interior of the β-sandwich. The novel β-sandwich model containing 25 % unnatural building blocks afforded protein-like thermal denaturation behavior.
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Affiliation(s)
- Gábor Olajos
- Institute of Pharmaceutical Analysis, SZTE-MTA Lendület Foldamer Research Group, University of Szeged, 6720 Szeged (Hungary)
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Jadhav SV, Misra R, Gopi HN. Foldamers to Nanotubes: Influence of Amino Acid Side Chains in the Hierarchical Assembly of α,γ4-Hybrid Peptide Helices. Chemistry 2014; 20:16523-8. [DOI: 10.1002/chem.201404961] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2014] [Indexed: 12/28/2022]
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Mándity IM, Monsignori A, Fülöp L, Forró E, Fülöp F. Exploiting aromatic interactions for β-peptide foldamer helix stabilization: a significant design element. Chemistry 2014; 20:4591-7. [PMID: 24664416 DOI: 10.1002/chem.201304448] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2013] [Indexed: 11/09/2022]
Abstract
Tetrameric H10/12 helix stabilization was achieved by the application of aromatic side-chains in β-peptide oligomers by intramolecular backbone-side chain CH-π interactions. Because of the enlarged hydrophobic surface of the oligomers, a further aim was the investigation of the self-assembly in a polar medium for the β-peptide H10/12 helices. NMR, ECD, and molecular modeling results indicated that the oligomers formed by cis-[1S,2S]- or cis-[1R,2R]-1-amino-1,2,3,4-tetrahydronaphthalene-2-carboxylic acid (ATENAC) and cis-[1R,2S]- or cis-[1S,2R]-2-aminocyclohex-3-enecarboxylic acid (ACHEC) residues promote stable H10/12 helix formation with an alternating backbone configuration even at the tetrameric chain length. These results support the view that aromatic side-chains can be applied for helical structure stabilization. Importantly, this is the first observation of a stable H10/12 helix with tetrameric chain-length. The hydrophobically driven self-assembly was achieved for the helix-forming oligomers, seen as vesicles in transmission electron microscopy images. The self-association phenomenon, which supports the helical secondary structure of these oligomers, depends on the hydrophobic surface area, because a higher number of aromatic side-chains yielded larger vesicles. These results serve as an essential element for the design of helices relating to the H10/12 helix. Moreover, they open up a novel area for bioactive foldamer construction, while the hydrophobic area gained through the aromatic side-chains may yield important receptor-ligand interaction surfaces, which can provide amplified binding strength.
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Affiliation(s)
- István M Mándity
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, 6720 Szeged (Hungary), Fax: (+36) 62-545705
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Del Borgo MP, Mechler AI, Traore D, Forsyth C, Wilce JA, Wilce MCJ, Aguilar MI, Perlmutter P. Supramolecular Self-Assembly ofN-Acetyl-Capped β-Peptides Leads to Nano- to Macroscale Fiber Formation. Angew Chem Int Ed Engl 2013; 52:8266-70. [DOI: 10.1002/anie.201303175] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2013] [Indexed: 12/26/2022]
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Del Borgo MP, Mechler AI, Traore D, Forsyth C, Wilce JA, Wilce MCJ, Aguilar MI, Perlmutter P. Supramolecular Self-Assembly ofN-Acetyl-Capped β-Peptides Leads to Nano- to Macroscale Fiber Formation. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201303175] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Szolnoki É, Hetényi A, Mándity IM, Fülöp F, Martinek TA. Foldameric β-H18/20PMixed Helix Stabilized by Head-to-Tail Contacts: A Way to Higher-Order Structures. European J Org Chem 2013. [DOI: 10.1002/ejoc.201201633] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Giri AG, Jogdand GF, Rajamohanan PR, Pandey SK, Ramana CV. Synthesis and Structural Characterization of Homochiral Homo-Oligomers of cis-γ-Methoxy-Substituted cis- and trans-Furanoid-β-Amino Acids. European J Org Chem 2012. [DOI: 10.1002/ejoc.201101424] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Segman-Magidovich S, Lee MR, Vaiser V, Struth B, Gellman SH, Rapaport H. Sheet-Like Assemblies of Charged Amphiphilic α/β-Peptides at the Air-Water Interface. Chemistry 2011; 17:14857-66. [DOI: 10.1002/chem.201101775] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2011] [Indexed: 11/10/2022]
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Galeazzi R, Martelli G, Mazzanti A, Orena M, Rinaldi S. Quaternary Centres as a Tool for Modulating Foldamer Conformation. Chemistry 2011; 17:12564-8. [DOI: 10.1002/chem.201102103] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2011] [Indexed: 11/11/2022]
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Affiliation(s)
- Claudia Tomasini
- Dipartimento di Chimica “G. Ciamician” Alma Mater Studiorum Università di Bologna via Selmi 2, 40126 Bologna, Italy, Fax: +39‐051‐2099456
| | - Gaetano Angelici
- Department of Chemistry, University of Basel, St. Johanns‐Ring 19, 4056 Basel, Switzerland
| | - Nicola Castellucci
- Dipartimento di Chimica “G. Ciamician” Alma Mater Studiorum Università di Bologna via Selmi 2, 40126 Bologna, Italy, Fax: +39‐051‐2099456
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Kwon S, Jeon A, Yoo SH, Chung IS, Lee HS. Unprecedented molecular architectures by the controlled self-assembly of a β-peptide foldamer. Angew Chem Int Ed Engl 2011; 49:8232-6. [PMID: 20734367 DOI: 10.1002/anie.201003302] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sunbum Kwon
- Molecular-Level Interface Research Center, Department of Chemistry, KAIST, 335 Gwahak-ro, Yuseong-gu, Daejeon 305-701, Korea
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Kwon S, Jeon A, Yoo SH, Chung IS, Lee HS. Unprecedented Molecular Architectures by the Controlled Self-Assembly of a β-Peptide Foldamer. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.201003302] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Alfonso I, Bru M, Burguete MI, García-Verdugo E, Luis S. Structural Diversity in the Self-Assembly of Pseudopeptidic Macrocycles. Chemistry 2010; 16:1246-55. [DOI: 10.1002/chem.200902196] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Segman S, Lee MR, Vaiser V, Gellman S, Rapaport H. Highly Stable Pleated-Sheet Secondary Structure in Assemblies of Amphiphilic α/β-Peptides at the Air-Water Interface. Angew Chem Int Ed Engl 2009; 49:716-9. [DOI: 10.1002/anie.200904566] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Segman S, Lee MR, Vaiser V, Gellman S, Rapaport H. Highly Stable Pleated-Sheet Secondary Structure in Assemblies of Amphiphilic α/β-Peptides at the Air-Water Interface. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200904566] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Hetényi A, Tóth GK, Somlai C, Vass E, Martinek TA, Fülöp F. Stabilisation of Peptide foldamers in an aqueous medium by incorporation of azapeptide building blocks. Chemistry 2009; 15:10736-41. [PMID: 19746464 DOI: 10.1002/chem.200900724] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Anasztázia Hetényi
- Institute of Pharmaceutical Chemistry, University of Szeged, 6720 Szeged, Eötvös u. 6, Hungary
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Mándity IM, Wéber E, Martinek TA, Olajos G, Tóth GK, Vass E, Fülöp F. Design of peptidic foldamer helices: a stereochemical patterning approach. Angew Chem Int Ed Engl 2009; 48:2171-5. [PMID: 19212995 DOI: 10.1002/anie.200805095] [Citation(s) in RCA: 100] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Assembly language: The programmed sequences of stereochemical building blocks lead to novel biomimetic helices. The rational design approach offers new possibilities for creating periodic secondary structures.
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Affiliation(s)
- István M Mándity
- Institute of Pharmaceutical Chemistry, Universitiy of Szeged, 6720 Szeged, Eötvös u. 6, Hungary
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Mándity I, Wéber E, Martinek T, Olajos G, Tóth G, Vass E, Fülöp F. Design of Peptidic Foldamer Helices: A Stereochemical Patterning Approach. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200805095] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Angelici G, Falini G, Hofmann HJ, Huster D, Monari M, Tomasini C. A Fiberlike Peptide Material Stabilized by Single Intermolecular Hydrogen Bonds. Angew Chem Int Ed Engl 2008; 47:8075-8. [DOI: 10.1002/anie.200802587] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Angelici G, Falini G, Hofmann HJ, Huster D, Monari M, Tomasini C. A Fiberlike Peptide Material Stabilized by Single Intermolecular Hydrogen Bonds. Angew Chem Int Ed Engl 2008. [DOI: 10.1002/ange.200802587] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Alfonso I, Bolte M, Bru M, Burguete M, Luis S. Designed Folding of Pseudopeptides: The Transformation of a Configurationally Driven Preorganization into a Stereoselective Multicomponent Macrocyclization Reaction. Chemistry 2008; 14:8879-8891. [DOI: 10.1002/chem.200800726] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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