1
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Bai Y, Yang X, Yu H, Chen X. Substrate and Process Engineering for Biocatalytic Synthesis and Facile Purification of Human Milk Oligosaccharides. CHEMSUSCHEM 2022; 15:e202102539. [PMID: 35100486 PMCID: PMC9272545 DOI: 10.1002/cssc.202102539] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 01/30/2022] [Indexed: 05/08/2023]
Abstract
Innovation in process development is essential for applying biocatalysis in industrial and laboratory production of organic compounds, including beneficial carbohydrates such as human milk oligosaccharides (HMOs). HMOs have attracted increasing attention for their potential application as key ingredients in products that can improve human health. To efficiently access HMOs through biocatalysis, a combined substrate and process engineering strategy is developed, namely multistep one-pot multienzyme (MSOPME) design. The strategy allows access to a pure tagged HMO in a single reactor with a single C18-cartridge purification process, despite the length of the target. Its efficiency is demonstrated in the high-yielding (71-91 %) one-pot synthesis of twenty tagged HMOs (83-155 mg), including long-chain oligosaccharides with or without fucosylation or sialylation up to nonaoses from a lactoside without the isolation of the intermediate oligosaccharides. Gram-scale synthesis of an important HMO derivative - tagged lacto-N-fucopentaose-I (LNFP-I) - proceeds in 84 % yield. Tag removal is carried out in high efficiency (94-97 %) without the need for column purification to produce the desired natural HMOs with a free reducing end. The method can be readily adapted for large-scale synthesis and automation to allow quick access to HMOs, other glycans, and glycoconjugates.
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Affiliation(s)
- Yuanyuan Bai
- Department of Chemistry, University of California, Davis, One Shields Avenue, 95616, Davis, California, USA
| | - Xiaohong Yang
- Department of Chemistry, University of California, Davis, One Shields Avenue, 95616, Davis, California, USA
| | - Hai Yu
- Department of Chemistry, University of California, Davis, One Shields Avenue, 95616, Davis, California, USA
| | - Xi Chen
- Department of Chemistry, University of California, Davis, One Shields Avenue, 95616, Davis, California, USA
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2
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Nejatie A, Colombo C, Hakak‐Zargar B, Bennet AJ. A Mechanistic Study on the Non‐enzymatic Hydrolysis of Kdn Glycosides. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Ali Nejatie
- Department of Chemistry Simon Fraser University 8888 University Drive Burnaby British Columbia V5A 1S6 Canada
| | - Cinzia Colombo
- Department of Chemistry Simon Fraser University 8888 University Drive Burnaby British Columbia V5A 1S6 Canada
| | - Benyamin Hakak‐Zargar
- Department of Chemistry Simon Fraser University 8888 University Drive Burnaby British Columbia V5A 1S6 Canada
| | - Andrew J. Bennet
- Department of Chemistry Simon Fraser University 8888 University Drive Burnaby British Columbia V5A 1S6 Canada
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3
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Fu X, Gadi MR, Wang S, Han J, Liu D, Chen X, Yin J, Li L. General Tolerance of Galactosyltransferases toward UDP‐galactosamine Expands Their Synthetic Capability. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202112574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Xuan Fu
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
- Center for Diagnostics & Therapeutics Georgia State University Atlanta GA 30303 USA
| | | | - Shuaishuai Wang
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
| | - Jinghua Han
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
| | - Ding Liu
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
| | - Xi Chen
- Department of Chemistry University of California, Davis Davis CA 95616 USA
| | - Jun Yin
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
- Center for Diagnostics & Therapeutics Georgia State University Atlanta GA 30303 USA
| | - Lei Li
- Department of Chemistry Georgia State University Atlanta GA 30303 USA
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4
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Fu X, Gadi MR, Wang S, Han J, Liu D, Chen X, Yin J, Li L. General Tolerance of Galactosyltransferases toward UDP-galactosamine Expands Their Synthetic Capability. Angew Chem Int Ed Engl 2021; 60:26555-26560. [PMID: 34661966 PMCID: PMC8720041 DOI: 10.1002/anie.202112574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Indexed: 12/15/2022]
Abstract
Accessing large numbers of structurally diverse glycans and derivatives is essential to functional glycomics. We showed a general tolerance of galactosyltransferases toward uridine-diphosphate-galactosamine (UDP-GalN), which is not a commonly used sugar nucleotide donor. The property was harnessed to develop a two-step chemoenzymatic strategy for facile synthesis of novel and divergent N-acetylgalactosamine (GalNAc)-glycosides and derivatives in preparative scales. The discovery and the application of the new property of existing glycosyltransferases expand their catalytic capabilities in generating novel carbohydrate linkages, thus prompting the synthesis of diverse glycans and glycoconjugates for biological studies.
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Affiliation(s)
- Xuan Fu
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
- Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | | | - Shuaishuai Wang
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
| | - Jinghua Han
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
| | - Ding Liu
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
| | - Xi Chen
- Department of Chemistry, University of California, Davis, Davis, CA, 95616, USA
| | - Jun Yin
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
- Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Lei Li
- Department of Chemistry, Georgia State University, Atlanta, GA, 30303, USA
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5
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Asressu KH, Chang C, Lam S, Wang C. Donor‐Reactivity‐Controlled Sialylation Reactions. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100718] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Kesatebrhan Haile Asressu
- Institute of Chemistry Academia Sinica Taipei 115 Taiwan
- Taiwan International Graduate Program (TIGP) Sustainable Chemical Science and Technology (SCST) Academia Sinica Taipei 115 Taiwan
- Department of Applied Chemistry National Yang Ming Chiao Tung University Hsinchu 300 Taiwan
| | - Chun‐Wei Chang
- Institute of Chemistry Academia Sinica Taipei 115 Taiwan
| | - Sarah Lam
- Institute of Chemistry Academia Sinica Taipei 115 Taiwan
| | - Cheng‐Chung Wang
- Institute of Chemistry Academia Sinica Taipei 115 Taiwan
- Taiwan International Graduate Program (TIGP) Sustainable Chemical Science and Technology (SCST) Academia Sinica Taipei 115 Taiwan
- Department of Applied Chemistry National Yang Ming Chiao Tung University Hsinchu 300 Taiwan
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6
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Trastoy B, Du JJ, Li C, García-Alija M, Klontz EH, Roberts BR, Donahue TC, Wang LX, Sundberg EJ, Guerin ME. GH18 endo-β-N-acetylglucosaminidases use distinct mechanisms to process hybrid-type N-linked glycans. J Biol Chem 2021; 297:101011. [PMID: 34324829 PMCID: PMC8374693 DOI: 10.1016/j.jbc.2021.101011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 07/22/2021] [Accepted: 07/23/2021] [Indexed: 12/24/2022] Open
Abstract
N-glycosylation is one of the most abundant posttranslational modifications of proteins, essential for many physiological processes, including protein folding, protein stability, oligomerization and aggregation, and molecular recognition events. Defects in the N-glycosylation pathway cause diseases that are classified as congenital disorders of glycosylation. The ability to manipulate protein N-glycosylation is critical not only to our fundamental understanding of biology but also for the development of new drugs for a wide range of human diseases. Chemoenzymatic synthesis using engineered endo-β-N-acetylglucosaminidases (ENGases) has been used extensively to modulate the chemistry of N-glycosylated proteins. However, defining the molecular mechanisms by which ENGases specifically recognize and process N-glycans remains a major challenge. Here we present the X-ray crystal structure of the ENGase EndoBT-3987 from Bacteroides thetaiotaomicron in complex with a hybrid-type glycan product. In combination with alanine scanning mutagenesis, molecular docking calculations and enzymatic activity measurements conducted on a chemically engineered monoclonal antibody substrate unveil two mechanisms for hybrid-type recognition and processing by paradigmatic ENGases. Altogether, the experimental data provide pivotal insight into the molecular mechanism of substrate recognition and specificity for GH18 ENGases and further advance our understanding of chemoenzymatic synthesis and remodeling of homogeneous N-glycan glycoproteins.
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Affiliation(s)
- Beatriz Trastoy
- Structural Glycobiology Lab, Structural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia, Derio, Spain; Structural Glycobiology Lab, IIS-Biocruces Bizkaia, Barakaldo, Bizkaia, Spain.
| | - Jonathan J Du
- Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA
| | - Chao Li
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, USA
| | - Mikel García-Alija
- Structural Glycobiology Lab, Structural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia, Derio, Spain; Structural Glycobiology Lab, IIS-Biocruces Bizkaia, Barakaldo, Bizkaia, Spain
| | - Erik H Klontz
- Institute of Human Virology, University of Maryland School of Medicine, Baltimore, Maryland, USA; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA
| | - Blaine R Roberts
- Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA
| | - Thomas C Donahue
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, USA
| | - Lai-Xi Wang
- Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, USA
| | - Eric J Sundberg
- Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, USA.
| | - Marcelo E Guerin
- Structural Glycobiology Lab, Structural Biology Unit, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia, Derio, Spain; Structural Glycobiology Lab, IIS-Biocruces Bizkaia, Barakaldo, Bizkaia, Spain; Ikerbasque, Basque Foundation for Science, Bilbao, Spain.
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7
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Laborda P, Lyu Y, Parmeggiani F, Lu A, Wang W, Huang Y, Huang K, Guo J, Liu L, Flitsch SL, Voglmeir J. An Enzymatic N‐Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914338] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Pedro Laborda
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
- Current address: School of Life SciencesNantong University 19 Qixiu Road 226019 Nantong China
| | - Yong‐Mei Lyu
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Fabio Parmeggiani
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Ai‐Min Lu
- College of SciencesNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Wen‐Jiao Wang
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Ying‐Ying Huang
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Kun Huang
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Juan Guo
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Li Liu
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Sabine L. Flitsch
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Josef Voglmeir
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
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8
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Laborda P, Lyu YM, Parmeggiani F, Lu AM, Wang WJ, Huang YY, Huang K, Guo J, Liu L, Flitsch SL, Voglmeir J. An Enzymatic N-Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides. Angew Chem Int Ed Engl 2020; 59:5308-5311. [PMID: 31834658 DOI: 10.1002/anie.201914338] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2019] [Revised: 12/10/2019] [Indexed: 12/22/2022]
Abstract
Chitin is one of the most abundant and cheaply available biopolymers in Nature. Chitin has become a valuable starting material for many biotechnological products through manipulation of its N-acetyl functionality, which can be cleaved under mild conditions using the enzyme family of de-N-acetylases. However, the chemoselective enzymatic re-acylation of glucosamine derivatives, which can introduce new stable functionalities into chitin derivatives, is much less explored. Herein we describe an acylase (CmCDA from Cyclobacterium marinum) that catalyzes the N-acylation of glycosamine with a range of carboxylic acids under physiological reaction conditions. This biocatalyst closes an important gap in allowing the conversion of chitin into complex glycosides, such as C5-modified sialosides, through the use of highly selective enzyme cascades.
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Affiliation(s)
- Pedro Laborda
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China.,Current address: School of Life Sciences, Nantong University, 19 Qixiu Road, 226019, Nantong, China
| | - Yong-Mei Lyu
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Fabio Parmeggiani
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Ai-Min Lu
- College of Sciences, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Wen-Jiao Wang
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Ying-Ying Huang
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Kun Huang
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Juan Guo
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Li Liu
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Sabine L Flitsch
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Josef Voglmeir
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
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9
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Wu HR, Anwar MT, Fan CY, Low PY, Angata T, Lin CC. Expedient assembly of Oligo-LacNAcs by a sugar nucleotide regeneration system: Finding the role of tandem LacNAc and sialic acid position towards siglec binding. Eur J Med Chem 2019; 180:627-636. [PMID: 31351394 DOI: 10.1016/j.ejmech.2019.07.046] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 06/26/2019] [Accepted: 07/15/2019] [Indexed: 11/28/2022]
Abstract
Sialosides containing (oligo-)N-acetyllactosamine (LacNAc, Galβ(1,4)GlcNAc) as core structure are known to serve as ligands for Siglecs. However, the role of tandem inner epitope for Siglec interaction has never been reported. Herein, we report the effect of internal glycan (by length and type) on the binding affinity and describe a simple and efficient chemo-enzymatic sugar nucleotide regeneration protocol for the preparative-scale synthesis of oligo-LacNAcs by the sequential use of β1,4-galactosyltransferase (β4GalT) and β1,3-N-acetylglucosyl transferase (β3GlcNAcT). Further modification of these oligo-LacNAcs was performed in one-pot enzymatic synthesis to yield sialylated and/or fucosylated analogs. A glycan library of 23 different sialosides containing various LacNAc lengths or Lac core with natural/unnatural sialylation and/or fucosylation was synthesized. These glycans were used to fabricate a glycan microarray that was utilized to screen glycan binding preferences against five different Siglecs (2, 7, 9, 14 and 15).
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Affiliation(s)
- Hsin-Ru Wu
- Department of Chemistry, National Tsing-Hua University, Hsinchu, 30013, Taiwan; Instrumentation Center of Ministry of Science and Technology at National Tsing-Hua University, Hsinchu, 30013, Taiwan
| | | | - Chen-Yo Fan
- Department of Chemistry, National Tsing-Hua University, Hsinchu, 30013, Taiwan
| | - Penk Yeir Low
- Institute of Biological Chemistry, Academia Sinica, Taipei, 11529, Taiwan
| | - Takashi Angata
- Institute of Biological Chemistry, Academia Sinica, Taipei, 11529, Taiwan.
| | - Chun-Cheng Lin
- Department of Chemistry, National Tsing-Hua University, Hsinchu, 30013, Taiwan.
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10
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Li PJ, Huang SY, Chiang PY, Fan CY, Guo LJ, Wu DY, Angata T, Lin CC. Chemoenzymatic Synthesis of DSGb5 and Sialylated Globo-series Glycans. Angew Chem Int Ed Engl 2019; 58:11273-11278. [PMID: 31140679 DOI: 10.1002/anie.201903943] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 05/02/2019] [Indexed: 12/26/2022]
Abstract
Sialic-acid-binding, immunoglobulin-type lectin-7 (Siglec-7) is present on the surface of natural killer cells. Siglec-7 shows preference for disialylated glycans, including α(2,8)-α(2,3)-disialic acids or internally branched α(2,6)-NeuAc, such as disialosylglobopentaose (DSGb5). Herein, DSGb5 was synthesized by a one-pot multiple enzyme method from Gb5 by α2,3-sialylation (with PmST1) followed by α2,6-sialylation (with Psp2,6ST) in 23 % overall yield. DSGb5 was also chemoenzymatically synthesized. The protection of the nonreducing-end galactose of Gb5 as 3,4-O-acetonide, 3,4-O-benzylidene, and 4,6-O-benzylidene derivatives provided DSGb5 in overall yields of 26 %, 12 %, and 19 %, respectively. Gb3, Gb4, and Gb5 were enzymatically sialylated to afford a range of globo-glycans. Surprisingly, DSGb5 shows a low affinity for Siglec-7 in a glycan microarray binding affinity assay. Among the synthesized globo-series glycans, α6α3DSGb4 shows the highest binding affinity for Siglec-7.
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Affiliation(s)
- Pei-Jhen Li
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Szu-Yu Huang
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Pei-Yun Chiang
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Chen-Yo Fan
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Li-Jhen Guo
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Dung-Yeh Wu
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
| | - Takashi Angata
- Institute of Biological Chemistry, Academia Sinica, 128, Sec. 2, Academia Rd., Nankang, Taipei, 11529, Taiwan
| | - Chun-Cheng Lin
- Department of Chemistry, National Tsing Hua University, 101, Sec. 2, Kuang Fu Rd., Hsinchu, 30013, Taiwan
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11
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Li P, Huang S, Chiang P, Fan C, Guo L, Wu D, Angata T, Lin C. Chemoenzymatic Synthesis of DSGb5 and Sialylated Globo‐series Glycans. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201903943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Pei‐Jhen Li
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Szu‐Yu Huang
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Pei‐Yun Chiang
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Chen‐Yo Fan
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Li‐Jhen Guo
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Dung‐Yeh Wu
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
| | - Takashi Angata
- Institute of Biological ChemistryAcademia Sinica 128, Sec. 2, Academia Rd. Nankang Taipei 11529 Taiwan
| | - Chun‐Cheng Lin
- Department of ChemistryNational Tsing Hua University 101, Sec. 2, Kuang Fu Rd. Hsinchu 30013 Taiwan
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12
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Li W, Khan M, Mao S, Feng S, Lin JM. Advances in tumor-endothelial cells co-culture and interaction on microfluidics. J Pharm Anal 2018; 8:210-218. [PMID: 30140484 PMCID: PMC6104288 DOI: 10.1016/j.jpha.2018.07.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2018] [Revised: 07/16/2018] [Accepted: 07/17/2018] [Indexed: 01/10/2023] Open
Abstract
The metastasis in which the cancer cells degrade the extracellular matrix (ECM) and invade to the surrounding and far tissues of the body is the leading cause of mortality in cancer patients. With a lot of advancement in the field, yet the biological cause of metastasis are poorly understood. The microfluidic system provides advanced technology to reconstruct a variety of in vivo-like environment for studying the interactions between tumor cells (TCs) and endothelial cells (ECs). This review gives a brief account of both two-dimensional models and three-dimensional microfluidic systems for the analysis of TCs-ECs co-culture as well as their applications to anti-cancer drug screening. Furthermore, the advanced methods for analyzing cell-to-cell interactions at single-cell level were also discussed.
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Affiliation(s)
| | | | | | | | - Jin-Ming Lin
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, MOE Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing 100084, China
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13
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Pett C, Nasir W, Sihlbom C, Olsson BM, Caixeta V, Schorlemer M, Zahedi RP, Larson G, Nilsson J, Westerlind U. Effective Assignment of α2,3/α2,6-Sialic Acid Isomers by LC-MS/MS-Based Glycoproteomics. Angew Chem Int Ed Engl 2018; 57:9320-9324. [PMID: 29742324 DOI: 10.1002/anie.201803540] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Revised: 05/08/2018] [Indexed: 11/07/2022]
Abstract
Distinct structural changes of the α2,3/α2,6-sialic acid glycosidic linkages on glycoproteins are of importance in cancer biology, inflammatory diseases, and virus tropism. Current glycoproteomic methodologies are, however, not amenable toward high-throughput characterization of sialic acid isomers. To enable such assignments, a mass spectrometry method utilizing synthetic model glycopeptides for the analysis of oxonium ion intensity ratios was developed. This method was successfully applied in large-scale glycoproteomics, thus allowing the site-specific structural characterization of sialic acid isomers.
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Affiliation(s)
- Christian Pett
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany.,Department of Chemistry, Umeå University, 90187, Umeå, Sweden
| | - Waqas Nasir
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden.,Thermo Fischer Scientific, Bremen, Germany
| | - Carina Sihlbom
- Proteomics Core Facility, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
| | - Britt-Marie Olsson
- Proteomics Core Facility, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden
| | - Vanessa Caixeta
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany
| | - Manuel Schorlemer
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany.,Department of Chemistry, Umeå University, 90187, Umeå, Sweden
| | - René P Zahedi
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany.,Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada
| | - Göran Larson
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden
| | - Jonas Nilsson
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden
| | - Ulrika Westerlind
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany.,Department of Chemistry, Umeå University, 90187, Umeå, Sweden
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14
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Pett C, Nasir W, Sihlbom C, Olsson BM, Caixeta V, Schorlemer M, Zahedi RP, Larson G, Nilsson J, Westerlind U. Effective Assignment of α2,3/α2,6-Sialic Acid Isomers by LC-MS/MS-Based Glycoproteomics. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201803540] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Christian Pett
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
- Department of Chemistry; Umeå University; 90187 Umeå Sweden
| | - Waqas Nasir
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine; University of Gothenburg; Gothenburg Sweden
- Thermo Fischer Scientific; Bremen Germany
| | - Carina Sihlbom
- Proteomics Core Facility, Sahlgrenska Academy; University of Gothenburg; Gothenburg Sweden
| | - Britt-Marie Olsson
- Proteomics Core Facility, Sahlgrenska Academy; University of Gothenburg; Gothenburg Sweden
| | - Vanessa Caixeta
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
| | - Manuel Schorlemer
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
- Department of Chemistry; Umeå University; 90187 Umeå Sweden
| | - René P. Zahedi
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
- Segal Cancer Proteomics Centre, Lady Davis Institute; Jewish General Hospital; McGill University; Montreal Quebec Canada
| | - Göran Larson
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine; University of Gothenburg; Gothenburg Sweden
| | - Jonas Nilsson
- Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine; University of Gothenburg; Gothenburg Sweden
| | - Ulrika Westerlind
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
- Department of Chemistry; Umeå University; 90187 Umeå Sweden
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15
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Wang S, Zhang Q, Chen C, Guo Y, Gadi MR, Yu J, Westerlind U, Liu Y, Cao X, Wang PG, Li L. Facile Chemoenzymatic Synthesis of O-Mannosyl Glycans. Angew Chem Int Ed Engl 2018; 57:9268-9273. [PMID: 29732660 DOI: 10.1002/anie.201803536] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Indexed: 02/01/2023]
Abstract
O Mannosylation is a vital protein modification involved in brain and muscle development whereas the biological relevance of O-mannosyl glycans has remained largely unknown owing to the lack of structurally defined glycoforms. An efficient scaffold synthesis/enzymatic extension (SSEE) strategy was developed to prepare such structures by combining gram-scale convergent chemical syntheses of three scaffolds and strictly controlled sequential enzymatic extension catalyzed by glycosyltransferases. In total, 45 O-mannosyl glycans were obtained, covering the majority of identified mammalian structures. Subsequent glycan microarray analysis revealed fine specificities of glycan-binding proteins and specific antisera.
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Affiliation(s)
- Shuaishuai Wang
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Qing Zhang
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - CongCong Chen
- National Glycoengineering Research Center, School of Pharmaceutical Science, Shandong University, Jinan, 250012, China
| | - Yuxi Guo
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Madhusudhan Reddy Gadi
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Jin Yu
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany
| | - Ulrika Westerlind
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., 44227, Dortmund, Germany.,Department of Chemistry, Umeå University, 901 87, Umeå, Sweden
| | - Yunpeng Liu
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Xuefeng Cao
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Peng G Wang
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
| | - Lei Li
- Department of Chemistry & Center for Diagnostics & Therapeutics, Georgia State University, Atlanta, GA, 30303, USA
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16
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Wang S, Zhang Q, Chen C, Guo Y, Gadi MR, Yu J, Westerlind U, Liu Y, Cao X, Wang PG, Li L. Facile Chemoenzymatic Synthesis of O-Mannosyl Glycans. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201803536] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Shuaishuai Wang
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Qing Zhang
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - CongCong Chen
- National Glycoengineering Research Center; School of Pharmaceutical Science; Shandong University; Jinan 250012 China
| | - Yuxi Guo
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Madhusudhan Reddy Gadi
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Jin Yu
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
| | - Ulrika Westerlind
- Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V.; 44227 Dortmund Germany
- Department of Chemistry; Umeå University; 901 87 Umeå Sweden
| | - Yunpeng Liu
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Xuefeng Cao
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Peng G. Wang
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
| | - Lei Li
- Department of Chemistry & Center for Diagnostics & Therapeutics; Georgia State University; Atlanta GA 30303 USA
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17
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Hunter CD, Khanna N, Richards MR, Rezaei Darestani R, Zou C, Klassen JS, Cairo CW. Human Neuraminidase Isoenzymes Show Variable Activities for 9- O-Acetyl-sialoside Substrates. ACS Chem Biol 2018; 13:922-932. [PMID: 29341588 DOI: 10.1021/acschembio.7b00952] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Recognition of terminal sialic acids is central to many cellular processes, and structural modification of sialic acid can disrupt these interactions. A prominent, naturally occurring, modification of sialic acid is 9- O-acetylation (9- O-Ac). Study of this modification through generation and analysis of 9- O-Ac sialosides is challenging because of the lability of the acetate group. Fundamental questions regarding the role of 9- O-Ac sialic acids remain unanswered, including what effect it may have on recognition and hydrolysis by the human neuraminidase enzymes (hNEU). To investigate the substrate activity of 9- O-acetylated sialic acids (Neu5,9Ac2), we synthesized an acetylated fluorogenic hNEU substrate 2'-(4-methylumbelliferyl)-9- O-acetyl-α-d- N-acetylneuraminic acid. Additionally, we generated a panel of octyl sialyllactosides containing modified sialic acids including variation in linkage, 9- O-acetylation, and C-5 group (Neu5Gc). Relative rates of substrate cleavage by hNEU were determined using fluorescence spectroscopy and electrospray ionization mass spectrometry. We report that 9- O-acetylation had a significant, and differential, impact on sialic acid hydrolysis by hNEU with general substrate tolerance following the trend of Neu5Ac > Neu5Gc ≫ Neu5,9Ac2 for NEU2, NEU3, and NEU4. Both NEU2 and NEU3 had remarkably reduced activity for Neu5,9Ac2 containing substrates. Other isoenzymes appeared to be more tolerant, with NEU4 even showing increased activity on Neu5,9Ac2 substrates with an aryl aglycone. The impact of these minor structural changes to sialic acid on hNEU activity was unexpected, and these results provide evidence of the substantial influence of 9- O-Ac modifications on hNEU enzyme substrate specificity. Furthermore, these findings may implicate hNEU in processes governed by 9- O-acetyltransferases and -esterases.
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Affiliation(s)
- Carmanah D. Hunter
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - Neha Khanna
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - Michele R. Richards
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - Reza Rezaei Darestani
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - Chunxia Zou
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - John S. Klassen
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
| | - Christopher W. Cairo
- Alberta Glycomics Centre, Department of Chemistry, University of Alberta, Edmonton Alberta T6G 2G2, Canada
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18
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Santra A, Xiao A, Yu H, Li W, Li Y, Ngo L, McArthur JB, Chen X. A Diazido Mannose Analogue as a Chemoenzymatic Synthon for Synthesizing Di-N
-acetyllegionaminic Acid-Containing Glycosides. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Abhishek Santra
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - An Xiao
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - Hai Yu
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - Wanqing Li
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - Yanhong Li
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - Linh Ngo
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - John B. McArthur
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
| | - Xi Chen
- Department of Chemistry; University of California, Davis; One Shields Avenue Davis CA 95616 USA
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19
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Santra A, Xiao A, Yu H, Li W, Li Y, Ngo L, McArthur JB, Chen X. A Diazido Mannose Analogue as a Chemoenzymatic Synthon for Synthesizing Di-N-acetyllegionaminic Acid-Containing Glycosides. Angew Chem Int Ed Engl 2018; 57:2929-2933. [PMID: 29349857 DOI: 10.1002/anie.201712022] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2017] [Indexed: 12/13/2022]
Abstract
A chemoenzymatic synthon was designed to expand the scope of the chemoenzymatic synthesis of carbohydrates. The synthon was enzymatically converted into carbohydrate analogues, which were readily derivatized chemically to produce the desired targets. The strategy is demonstrated for the synthesis of glycosides containing 7,9-di-N-acetyllegionaminic acid (Leg5,7Ac2 ), a bacterial nonulosonic acid (NulO) analogue of sialic acid. A versatile library of α2-3/6-linked Leg5,7Ac2 -glycosides was built by using chemically synthesized 2,4-diazido-2,4,6-trideoxymannose as a chemoenzymatic synthon for highly efficient one-pot multienzyme (OPME) sialylation followed by downstream chemical conversion of the azido groups into acetamido groups. The syntheses required 10 steps from commercially available d-fucose and had an overall yield of 34-52 %, thus representing a significant improvement over previous methods. Free Leg5,7Ac2 monosaccharide was also synthesized by a sialic acid aldolase-catalyzed reaction.
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Affiliation(s)
- Abhishek Santra
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - An Xiao
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Hai Yu
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Wanqing Li
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Yanhong Li
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Linh Ngo
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - John B McArthur
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Xi Chen
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
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20
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Mao S, Zhang W, Huang Q, Khan M, Li H, Uchiyama K, Lin JM. In Situ Scatheless Cell Detachment Reveals Correlation between Adhesion Strength and Viability at Single-Cell Resolution. Angew Chem Int Ed Engl 2017; 57:236-240. [PMID: 29136313 DOI: 10.1002/anie.201710273] [Citation(s) in RCA: 64] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Revised: 10/29/2017] [Indexed: 12/20/2022]
Abstract
Single-cell biology provides insights into some of the most fundamental processes in biology and promotes the understanding of life's mysteries. As the technologies to study single-cells expand, they will require sophisticated analytical tools to make sense of various behaviors and components of single-cells as well as their relations in the adherent tissue culture. In this paper, we revealed cell heterogeneity and uncovered the connections between cell adhesion strength and cell viability at single-cell resolution by extracting single adherent cells of interest from a standard tissue culture by using a microfluidic chip-based live single-cell extractor (LSCE). We believe that this method will provide a valuable new tool for single-cell biology.
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Affiliation(s)
- Sifeng Mao
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
| | - Wanling Zhang
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
| | - Qiushi Huang
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
| | - Mashooq Khan
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
| | - Haifang Li
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
| | - Katsumi Uchiyama
- Department of Applied Chemistry, Graduate School of Urban Environmental Sciences, Tokyo Metropolitan University, Minamiohsawa, Hachioji, Tokyo, 192-0397, Japan
| | - Jin-Ming Lin
- Department of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, 100084, China
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21
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Mao S, Zhang W, Huang Q, Khan M, Li H, Uchiyama K, Lin JM. In Situ Scatheless Cell Detachment Reveals Correlation between Adhesion Strength and Viability at Single-Cell Resolution. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201710273] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Sifeng Mao
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
| | - Wanling Zhang
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
| | - Qiushi Huang
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
| | - Mashooq Khan
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
| | - Haifang Li
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
| | - Katsumi Uchiyama
- Department of Applied Chemistry; Graduate School of Urban Environmental Sciences; Tokyo Metropolitan University; Minamiohsawa Hachioji Tokyo 192-0397 Japan
| | - Jin-Ming Lin
- Department of Chemistry; Beijing Key Laboratory of Microanalytical Methods and Instrumentation; The Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology; Tsinghua University; Beijing 100084 China
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22
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Lv X, Cao H, Lin B, Wang W, Zhang W, Duan Q, Tao Y, Liu XW, Li X. Synthesis of Sialic Acids, Their Derivatives, and Analogs by Using a Whole-Cell Catalyst. Chemistry 2017; 23:15143-15149. [DOI: 10.1002/chem.201703083] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Indexed: 01/27/2023]
Affiliation(s)
- Xun Lv
- CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology; Chinese Academy of Sciences (CAS), Chaoyang District; Beijing 100101 P. R. China
| | - Hongzhi Cao
- National Glycoengineering Research Center; Shandong University; Jinan 250012 P. R. China
| | - Baixue Lin
- CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology; Chinese Academy of Sciences (CAS), Chaoyang District; Beijing 100101 P. R. China
| | - Wei Wang
- School of Materials Science and Engineering; Changchun University of Science and Technology, Weixing Road; Changchun 130022 P. R. China
| | - Wande Zhang
- School of Materials Science and Engineering; Changchun University of Science and Technology, Weixing Road; Changchun 130022 P. R. China
| | - Qian Duan
- School of Materials Science and Engineering; Changchun University of Science and Technology, Weixing Road; Changchun 130022 P. R. China
| | - Yong Tao
- CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology; Chinese Academy of Sciences (CAS), Chaoyang District; Beijing 100101 P. R. China
| | - Xue-Wei Liu
- School of Physical and Mathematical Sciences; Nanyang Technological University; Singapore 637371 Singapore
| | - Xuebing Li
- CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology; Chinese Academy of Sciences (CAS), Chaoyang District; Beijing 100101 P. R. China
- Savaid Medical School; University of Chinese Academy of Sciences, Huairou District; Beijing 101408 P. R. China
- Center for Influenza Research and Early Warning (CASCIRE); Chinese Academy of Sciences, Chaoyang District; Beijing 100101 P. R. China
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23
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Laborda P, Wang SY, Lu AM, He M, Duan XC, Qian YJ, Jung YS, Liu L, Voglmeir J. Diastereoselective One-Step Synthesis of 2-Keto-3-deoxy-d- glycero-d-galacto-nononic acid (KDN) Analogues as Templates for the Development of Influenza Drugs. Adv Synth Catal 2017. [DOI: 10.1002/adsc.201700678] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Pedro Laborda
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
- Jiangsu Academy of Agricultural Sciences; Nanjing Jiangsu 210014 People's Republic of China
| | - Su-Yan Wang
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Ai-Min Lu
- College of Sciences; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Meng He
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Xu-Chu Duan
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Ying-Juan Qian
- College of Sciences; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Yong-Sam Jung
- Antiviral Unit; Department of Veterinary Medicine; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Li Liu
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
| | - Josef Voglmeir
- Glycomics and Glycan Bioengineering Research Center; College of Food Science and Technology; Nanjing Agricultural University; Nanjing Jiangsu 210095 People's Republic of China
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24
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Liu Y, Wen L, Li L, Gadi MR, Guan W, Huang K, Xiao Z, Wei M, Ma C, Zhang Q, Yu H, Chen X, Wang PG, Fang J. A General Chemoenzymatic Strategy for the Synthesis of Glycosphingolipids. European J Org Chem 2016; 2016:4315-4320. [PMID: 28824290 PMCID: PMC5560440 DOI: 10.1002/ejoc.201600950] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2016] [Indexed: 12/22/2022]
Abstract
A concise, prototypical, and stereoselective strategy for the synthesis of therapeutically and immunologically significant glycosphingolipids has been developed. This strategy provides a universal platform for glycosphingolipid synthesis by block coupling of enzymatically prepared free oligosaccharideglycans to lipids using glycosyl N-phenyltrifluoroacetimidates as efficient activated intermediates. As demonstrated here, two different types of glycosphingolipids were obtained in excellent yields using the method.
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Affiliation(s)
- Yunpeng Liu
- National Glycoengineering Research Center, Shandong Provincial Key Lab of Carbohydrate Chemistry, and State Key Lab of Microbial Technology, Shandong University, Jinan, Shandong 250100, People's Republic of China
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Liuqing Wen
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Lei Li
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Madhusudhan Reddy Gadi
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Wanyi Guan
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Kenneth Huang
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Zhongying Xiao
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Mohui Wei
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Cheng Ma
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Qing Zhang
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Hai Yu
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA 95616, https://chenglycogroup.wordpress.com/
| | - Xi Chen
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA 95616, https://chenglycogroup.wordpress.com/
| | - Peng George Wang
- National Glycoengineering Research Center, Shandong Provincial Key Lab of Carbohydrate Chemistry, and State Key Lab of Microbial Technology, Shandong University, Jinan, Shandong 250100, People's Republic of China
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30303, USA, http://lithium.gsu.edu/faculty/PWang/
| | - Junqiang Fang
- National Glycoengineering Research Center, Shandong Provincial Key Lab of Carbohydrate Chemistry, and State Key Lab of Microbial Technology, Shandong University, Jinan, Shandong 250100, People's Republic of China
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25
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Yu CC, Withers SG. Recent Developments in Enzymatic Synthesis of Modified Sialic Acid Derivatives. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500349] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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26
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Yu H, Lau K, Thon V, Autran CA, Jantscher-Krenn E, Xue M, Li Y, Sugiarto G, Qu J, Mu S, Ding L, Bode L, Chen X. Synthetic Disialyl Hexasaccharides Protect Neonatal Rats from Necrotizing Enterocolitis. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201403588] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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27
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Yu H, Lau K, Thon V, Autran CA, Jantscher-Krenn E, Xue M, Li Y, Sugiarto G, Qu J, Mu S, Ding L, Bode L, Chen X. Synthetic disialyl hexasaccharides protect neonatal rats from necrotizing enterocolitis. Angew Chem Int Ed Engl 2014; 53:6687-91. [PMID: 24848971 DOI: 10.1002/anie.201403588] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2014] [Indexed: 12/29/2022]
Abstract
Two novel synthetic α2-6-linked disialyl hexasaccharides, disialyllacto-N-neotetraose (DSLNnT) and α2-6-linked disialyllacto-N-tetraose (DS'LNT), were readily obtained by highly efficient one-pot multienzyme (OPME) reactions. The sequential OPME systems described herein allowed the use of an inexpensive disaccharide and simple monosaccharides to synthesize the desired complex oligosaccharides with high efficiency and selectivity. DSLNnT and DS'LNT were shown to protect neonatal rats from necrotizing enterocolitis (NEC) and are good therapeutic candidates for preclinical experiments and clinical application in treating NEC in preterm infants.
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Affiliation(s)
- Hai Yu
- Department of Chemistry, University of California-Davis, One Shields Avenue, Davis, CA 95616 (USA)
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Yi D, He N, Kickstein M, Metzner J, Weiß M, Berry A, Fessner W. Engineering of a Cytidine 5′‐Monophosphate‐Sialic Acid Synthetase for Improved Tolerance to Functional Sialic Acids. Adv Synth Catal 2013. [DOI: 10.1002/adsc.201300568] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Dong Yi
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
| | - Ning He
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
| | - Michael Kickstein
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
| | - Julia Metzner
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
| | - Martin Weiß
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
| | - Alan Berry
- Astbury Centre for Structural Molecular Biology and School of Molecular and Cellular Biology, University of Leeds, Leeds LS2 9 JT, U.K
| | - Wolf‐Dieter Fessner
- Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Petersenstrasse 22, 64287 Darmstadt, Germany, Fax: (+49)‐6151‐166636
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Hsu CH, Hung SC, Wu CY, Wong CH. Toward automated oligosaccharide synthesis. Angew Chem Int Ed Engl 2011; 50:11872-923. [PMID: 22127846 DOI: 10.1002/anie.201100125] [Citation(s) in RCA: 205] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2011] [Indexed: 12/16/2022]
Abstract
Carbohydrates have been shown to play important roles in biological processes. The pace of development in carbohydrate research is, however, relatively slow due to the problems associated with the complexity of carbohydrate structures and the lack of general synthetic methods and tools available for the study of this class of biomolecules. Recent advances in synthesis have demonstrated that many of these problems can be circumvented. In this Review, we describe the methods developed to tackle the problems of carbohydrate-mediated biological processes, with particular focus on the issue related to the development of the automated synthesis of oligosaccharides. Further applications of carbohydrate microarrays and vaccines to human diseases are also highlighted.
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Affiliation(s)
- Che-Hsiung Hsu
- The Genomics Research Center, Academia Sinica, Taipei, Taiwan
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Hsu CH, Hung SC, Wu CY, Wong CH. Auf dem Weg zur automatisierten Oligosaccharid- Synthese. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201100125] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Flexibility of Substrate Binding of Cytosine-5′-Monophosphate-N-Acetylneuraminate Synthetase (CMP-Sialate Synthetase) from Neisseria meningitidis: An Enabling Catalyst for the Synthesis of Neo-sialoconjugates. Adv Synth Catal 2011. [DOI: 10.1002/adsc.201100412] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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Pourceau G, Chevolot Y, Goudot A, Giroux F, Meyer A, Moulés V, Lina B, Cecioni S, Vidal S, Yu H, Chen X, Ferraris O, Praly JP, Souteyrand E, Vasseur JJ, Morvan F. Measurement of Enzymatic Activity and Specificity of Human and Avian Influenza Neuraminidases from Whole Virus by Glycoarray and MALDI-TOF Mass Spectrometry. Chembiochem 2011; 12:2071-80. [DOI: 10.1002/cbic.201100128] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2011] [Indexed: 01/12/2023]
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Schroven A, Meinke S, Ziegelmüller P, Thiem J. Transsialidase fromTrypanosoma cruzi for Regio- and Stereoselective Synthesis of N-Acyl-Modified Sialylated Oligosaccharides and Measurement of Transfer Rates. Chemistry 2007; 13:9012-21. [PMID: 17680570 DOI: 10.1002/chem.200700439] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Recombinant transsialidase from Trypanosoma cruzi (TcTS) was used for the sialylation with natural and non-natural derivatives of neuraminic acid. Neu5Ac-alpha(2-->3)-Gal-beta(1-->6)-Glc-alphaOMe was prepared in 80 % yield. Correspondingly, the modified trisaccharide derivatives Neu5Prop-alpha(2-->3)-Gal-beta(1-->6)-Glc-alphaOMe (32 %) and Neu5Gc-alpha(2-->3)-Gal-beta(1-->6)-Glc-alphaOMe (Prop=propanoyl, Gc=glycolyl) were obtained in 60 % yield, respectively.
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Affiliation(s)
- Andreas Schroven
- University of Hamburg, Faculty of Science, Department of Chemistry, Institute of Organic Chemistry, Martin-Luther-King Platz 6, 20146, Hamburg, Germany
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Huang S, Yu H, Chen X. Disaccharides as sialic acid aldolase substrates: synthesis of disaccharides containing a sialic acid at the reducing end. Angew Chem Int Ed Engl 2007; 46:2249-53. [PMID: 17309109 DOI: 10.1002/anie.200604799] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Shengshu Huang
- Department of Chemistry, University of California-Davis, One Shields Avenue, Davis, CA 95616, USA
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Huang S, Yu H, Chen X. Disaccharides as Sialic Acid Aldolase Substrates: Synthesis of Disaccharides Containing a Sialic Acid at the Reducing End. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200604799] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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