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Hao Q, Li ZJ, Bai B, Zhang X, Zhong YW, Wan LJ, Wang D. A Covalent Organic Framework Film for Three-State Near-Infrared Electrochromism and a Molecular Logic Gate. Angew Chem Int Ed Engl 2021; 60:12498-12503. [PMID: 33756014 DOI: 10.1002/anie.202100870] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Revised: 03/02/2021] [Indexed: 11/10/2022]
Abstract
A Kagome structure covalent organic framework (COF) film with three-state NIR electrochromic properties was designed and synthesized. The COFTPDA-PDA film is composed of hexagonal nanosheets with high crystallinity and has three reversible color states at different applied potentials. It has high absorption spectra changes in the NIR region, ascribed to the strong intervalence charge transfer (IVCT) interaction of the Class III mixed-valence systems of the conjugated triphenylamine species. The film showed sub-second response time (1.3 s for coloring and 0.7 s for bleaching at 1050 nm) and long retention time in the NIR region. COFTPDA-PDA film shows superior NIR electrochromic properties in term of response time and stability, attributed to the highly ordered porous structure and the π-π stacking structure of the COFTPDA-PDA architecture. The COFTPDA-PDA film was applied in mimicking a flip-flop logic gate with optical memory function.
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Affiliation(s)
- Qing Hao
- Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Zhi-Juan Li
- Key Laboratory of Photochemistry, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Bin Bai
- Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Xing Zhang
- Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Yu-Wu Zhong
- Key Laboratory of Photochemistry, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Li-Jun Wan
- Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Dong Wang
- Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China.,University of the Chinese Academy of Sciences, Beijing, 100049, P. R. China
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2
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Hao Q, Li Z, Bai B, Zhang X, Zhong Y, Wan L, Wang D. A Covalent Organic Framework Film for Three‐State Near‐Infrared Electrochromism and a Molecular Logic Gate. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202100870] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Qing Hao
- Key Laboratory of Molecular Nanostructure and Nanotechnology Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 P. R. China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Zhi‐Juan Li
- Key Laboratory of Photochemistry Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Bin Bai
- Key Laboratory of Molecular Nanostructure and Nanotechnology Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 P. R. China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Xing Zhang
- Key Laboratory of Molecular Nanostructure and Nanotechnology Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 P. R. China
| | - Yu‐Wu Zhong
- Key Laboratory of Photochemistry Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Li‐Jun Wan
- Key Laboratory of Molecular Nanostructure and Nanotechnology Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 P. R. China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Dong Wang
- Key Laboratory of Molecular Nanostructure and Nanotechnology Beijing National Laboratory for Molecular Sciences CAS Research/Education Center for Excellence in Molecular Sciences Institute of Chemistry Chinese Academy of Sciences Beijing 100190 P. R. China
- University of the Chinese Academy of Sciences Beijing 100049 P. R. China
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3
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Hamo Y, Lahav M, Boom ME. Bifunctional Nanoscale Assemblies: Multistate Electrochromics Coupled with Charge Trapping and Release. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201912333] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Yonatan Hamo
- Department of Organic ChemistryWeizmann Institute of Science 7610001 Rehovot Israel
| | - Michal Lahav
- Department of Organic ChemistryWeizmann Institute of Science 7610001 Rehovot Israel
| | - Milko E. Boom
- Department of Organic ChemistryWeizmann Institute of Science 7610001 Rehovot Israel
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4
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Hamo Y, Lahav M, van der Boom ME. Bifunctional Nanoscale Assemblies: Multistate Electrochromics Coupled with Charge Trapping and Release. Angew Chem Int Ed Engl 2020; 59:2612-2617. [PMID: 31696626 DOI: 10.1002/anie.201912333] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 11/04/2019] [Indexed: 12/13/2022]
Abstract
We demonstrate controlled charge trapping and release, accompanied by multiple color changes in a metallo-organic bilayer. The dual functionality of the metallo-organic materials provides fundamental insight into the metal-mediated electron transport pathways. The electrochemical processes are visualized by distinct, four color-to-color transitions: red, transparent, orange, and brown. The bilayer is composed of two elements: 1) a nanoscale gate consisting of a layer of well-defined polypyridyl ruthenium complexes bound to a flexible transparent electrode, and 2) a charge storage layer consisting of isostructural iron complexes attached to the surface of the gate. This gate mediates or blocks electron transport in response to an applied voltage. The charge storage and release depend on the oxidation state of the layer of ruthenium complexes (=gate). Combining electrochemistry with optical data revealed mechanistic information: the brown coloration of the bilayer directly relates to the formation of intermediate ruthenium species, providing evidence for catalytic positive charge release mediated through the gate.
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Affiliation(s)
- Yonatan Hamo
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001, Rehovot, Israel
| | - Michal Lahav
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001, Rehovot, Israel
| | - Milko E van der Boom
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001, Rehovot, Israel
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5
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Keisar H, Lahav M, van der Boom ME. Integrated Molecular Logic Using a Multistate Electrochromic Platform. Chemphyschem 2019; 20:2403-2407. [PMID: 31402510 DOI: 10.1002/cphc.201900784] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Indexed: 01/08/2023]
Abstract
Herein, we present an approach that integrates molecular logic functions using surface-confined metallo-organic assemblies. These assemblies are electrochromic and mimic the behaviour of logic elements. The logic elements are addressed individually by electrochemical methods, and their outputs are simultaneously read-out optically by UV/Vis absorption spectroscopy. The versatility of our setup is demonstrated by the integration of two multi-component assemblies; each acting as ternary logic elements. We used also a laminated cell configuration to demonstrate color-to-color and color-to-transparent transitions. This concept offers a route for the future development of devices with multiple logic states.
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Affiliation(s)
- Hodaya Keisar
- Department of Organic Chemistry, The Weizmann Institute of Science, 7610001, Rehovot, Israel
| | - Michal Lahav
- Department of Organic Chemistry, The Weizmann Institute of Science, 7610001, Rehovot, Israel
| | - Milko E van der Boom
- Department of Organic Chemistry, The Weizmann Institute of Science, 7610001, Rehovot, Israel
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6
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Zhang J, Du J, Wang J, Wang Y, Wei C, Li M. Vertical Step‐Growth Polymerization Driven by Electrochemical Stimuli from an Electrode. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201809567] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Jian Zhang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of the Chinese Academy of Sciences Beijing 100049 China
| | - Jia Du
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
| | - Jinxin Wang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of Science and Technology of China Hefei 230026 China
| | - Yanfang Wang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
| | - Chang Wei
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of Science and Technology of China Hefei 230026 China
| | - Mao Li
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of the Chinese Academy of Sciences Beijing 100049 China
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Zhang J, Du J, Wang J, Wang Y, Wei C, Li M. Vertical Step‐Growth Polymerization Driven by Electrochemical Stimuli from an Electrode. Angew Chem Int Ed Engl 2018; 57:16698-16702. [DOI: 10.1002/anie.201809567] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2018] [Indexed: 01/27/2023]
Affiliation(s)
- Jian Zhang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of the Chinese Academy of Sciences Beijing 100049 China
| | - Jia Du
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
| | - Jinxin Wang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of Science and Technology of China Hefei 230026 China
| | - Yanfang Wang
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
| | - Chang Wei
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of Science and Technology of China Hefei 230026 China
| | - Mao Li
- State Key Laboratory of Polymer Physics and ChemistryChangchun Institute of Applied Chemistry (CIAC) Changchun 130022 China
- University of the Chinese Academy of Sciences Beijing 100049 China
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8
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Gupta AS, Kumar G, Paul K, Luxami V. BINOL-based differential chromo-fluorescent sensor and its application in miniaturized 1-2/4-2 bit encoders and decoders. NEW J CHEM 2018. [DOI: 10.1039/c7nj03653a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A BINOL (1,1′-bi-2-naphthol)-based probe 1 with a diamide group has been synthesized and investigated for its photophysical behavior towards various cations and anions.
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Affiliation(s)
- Akul Sen Gupta
- School of Chemistry and Biochemistry, Thapar University
- Patiala-147004
- India
| | - Gulshan Kumar
- School of Chemistry and Biochemistry, Thapar University
- Patiala-147004
- India
| | - Kamaldeep Paul
- School of Chemistry and Biochemistry, Thapar University
- Patiala-147004
- India
| | - Vijay Luxami
- School of Chemistry and Biochemistry, Thapar University
- Patiala-147004
- India
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9
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Gao J, Liu Y, Lin X, Deng J, Yin J, Wang S. Implementation of cascade logic gates and majority logic gate on a simple and universal molecular platform. Sci Rep 2017; 7:14014. [PMID: 29070871 PMCID: PMC5656625 DOI: 10.1038/s41598-017-14416-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Accepted: 10/11/2017] [Indexed: 12/18/2022] Open
Abstract
Wiring a series of simple logic gates to process complex data is significantly important and a large challenge for untraditional molecular computing systems. The programmable property of DNA endows its powerful application in molecular computing. In our investigation, it was found that DNA exhibits excellent peroxidase-like activity in a colorimetric system of TMB/H2O2/Hemin (TMB, 3,3′, 5,5′-Tetramethylbenzidine) in the presence of K+ and Cu2+, which is significantly inhibited by the addition of an antioxidant. According to the modulated catalytic activity of this DNA-based catalyst, three cascade logic gates including AND-OR-INH (INHIBIT), AND-INH and OR-INH were successfully constructed. Interestingly, by only modulating the concentration of Cu2+, a majority logic gate with a single-vote veto function was realized following the same threshold value as that of the cascade logic gates. The strategy is quite straightforward and versatile and provides an instructive method for constructing multiple logic gates on a simple platform to implement complex molecular computing.
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Affiliation(s)
- Jinting Gao
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China
| | - Yaqing Liu
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China.
| | - Xiaodong Lin
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China
| | - Jiankang Deng
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China
| | - Jinjin Yin
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China
| | - Shuo Wang
- Key Laboratory of Food Nutrition and Safety (Ministry of Education of China), College of Food Engineering and Biotechnology, Tianjin University of Science and Technology, Tianjin Economic and Technological Development Area, the 13th Avenue, No. 29, Tianjin, 300457, China.
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Muñoz J, Crivillers N, Mas-Torrent M. Carbon-Rich Monolayers on ITO as Highly Sensitive Platforms for Detecting Polycyclic Aromatic Hydrocarbons in Water: The Case of Pyrene. Chemistry 2017; 23:15289-15293. [DOI: 10.1002/chem.201703264] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Indexed: 12/13/2022]
Affiliation(s)
- Jose Muñoz
- Institut de Ciència de Materials de Barcelona (ICMAB-CSIC); and CIBER-BBN; Campus de la UAB 08193 Bellaterra (Cerdanyola del Vallès) Spain
| | - Núria Crivillers
- Institut de Ciència de Materials de Barcelona (ICMAB-CSIC); and CIBER-BBN; Campus de la UAB 08193 Bellaterra (Cerdanyola del Vallès) Spain
| | - Marta Mas-Torrent
- Institut de Ciència de Materials de Barcelona (ICMAB-CSIC); and CIBER-BBN; Campus de la UAB 08193 Bellaterra (Cerdanyola del Vallès) Spain
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Affiliation(s)
- Patricia Remón
- CIQSO-Center for Research in Sustainable Chemistry and Department of Chemistry; University of Huelva; Campus de El Carmen s/n 21071 Huelva Spain
| | - Uwe Pischel
- CIQSO-Center for Research in Sustainable Chemistry and Department of Chemistry; University of Huelva; Campus de El Carmen s/n 21071 Huelva Spain
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12
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Gao RR, Yao TM, Lv XY, Zhu YY, Zhang YW, Shi S. Integration of G-quadruplex and DNA-templated Ag NCs for nonarithmetic information processing. Chem Sci 2017; 8:4211-4222. [PMID: 28626564 PMCID: PMC5469004 DOI: 10.1039/c7sc00361g] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 04/05/2017] [Indexed: 11/30/2022] Open
Abstract
To create sophisticated molecular logic circuits from scratch, you may not believe how common the building blocks can be and how diverse and powerful such circuits can be when scaled up. Using the two simple building blocks of G-quadruplex and silver nanoclusters (Ag NCs), we experimentally construct a series of multifunctional, label-free, and multi-output logic circuits to perform nonarithmetic functions: a 1-to-2 decoder, a 4-to-2 encoder, an 8-to-3 encoder, dual transfer gates, a 2 : 1 multiplexer, and a 1 : 2 demultiplexer. Moreover, a parity checker which is capable of identifying odd and even numbers from natural numbers is constructed conceptually. Finally, a multi-valued logic gate (ternary inhibit gate) is readily achieved by taking this DNA/Ag NC system as a universal platform. All of the above logic circuits share the same building blocks, indicating the great prospects of the assembly of nanomaterials and DNA for biochemical logic devices. Considering its biocompatibility, the novel prototypes developed here may have potential applications in the fields of biological computers and medical diagnosis and serve as a promising proof of principle in the not-too-distant future.
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Affiliation(s)
- Ru-Ru Gao
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Tian-Ming Yao
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Xiao-Yan Lv
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Yan-Yan Zhu
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Yi-Wei Zhang
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Shuo Shi
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , School of Chemical Science and Engineering , Tongji University , Shanghai , 200092 , P. R. China . ;
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14
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Laschuk NO, Ebralidze II, Spasyuk D, Zenkina OV. Multi‐Readout Logic Gate for the Selective Detection of Metal Ions at the Parts Per Billion Level. Eur J Inorg Chem 2016. [DOI: 10.1002/ejic.201600606] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Nadia O. Laschuk
- Faculty of ScienceUniversity of Ontario Institute of Technology2000 Simcoe Street NorthL1H 7K4OshawaONCanada
| | - Iraklii I. Ebralidze
- Faculty of ScienceUniversity of Ontario Institute of Technology2000 Simcoe Street NorthL1H 7K4OshawaONCanada
| | - Denis Spasyuk
- Department of ChemistryUniversity of Calgary2500 University Drive NWT2N 1N4CalgaryABCanada
| | - Olena V. Zenkina
- Faculty of ScienceUniversity of Ontario Institute of Technology2000 Simcoe Street NorthL1H 7K4OshawaONCanada
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15
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Casado-Montenegro J, Marchante E, Crivillers N, Rovira C, Mas-Torrent M. Donor/Acceptor Mixed Self-Assembled Monolayers for Realising a Multi-Redox-State Surface. Chemphyschem 2016; 17:1810-4. [DOI: 10.1002/cphc.201600176] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Javier Casado-Montenegro
- Department of Molecular Nanoscience and Organic Materials; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC) and Networking, Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN); Campus de la UAB 08193 Bellaterra Spain
| | - Elena Marchante
- Department of Molecular Nanoscience and Organic Materials; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC) and Networking, Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN); Campus de la UAB 08193 Bellaterra Spain
| | - Núria Crivillers
- Department of Molecular Nanoscience and Organic Materials; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC) and Networking, Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN); Campus de la UAB 08193 Bellaterra Spain
| | - Concepció Rovira
- Department of Molecular Nanoscience and Organic Materials; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC) and Networking, Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN); Campus de la UAB 08193 Bellaterra Spain
| | - Marta Mas-Torrent
- Department of Molecular Nanoscience and Organic Materials; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC) and Networking, Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN); Campus de la UAB 08193 Bellaterra Spain
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16
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Gao RR, Shi S, Zhu Y, Huang HL, Yao TM. A RET-supported logic gate combinatorial library to enable modeling and implementation of intelligent logic functions. Chem Sci 2015; 7:1853-1861. [PMID: 29899907 PMCID: PMC5964972 DOI: 10.1039/c5sc03570h] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2015] [Accepted: 11/17/2015] [Indexed: 12/12/2022] Open
Abstract
A logic gate combinatorial library, including basic logic gates, a single three-input NOR gate, and combinatorial gates to realize intelligent logic functions (keypad-lock, parity checker) is constructed.
Boolean logic gates integrate multiple digital inputs into a digital output. Among these, logic gates based on nucleic acids have attracted a great deal of attention due to the prospect of controlling living systems in the way we control electronic computers. Herein, by employing Thioflavin T (ThT) as a signal transducer, we integrated multiple components based on RET (a type of proto-oncogene) into a logic gate combinatorial library, including basic logic gates (NOR, INHIBIT, IMPLICATION), a single three-input NOR gate, and combinatorial gates (INHIBIT–OR, NOT–AND–NOR). In this library, gates were connected in series where the output of the previous gate was the input for the next gate. Subsequently, by taking advantage of the library, some intelligent logic functions were realized. Expectedly, a biocomputing keypad-lock security system was designed by sequential logic operations. Moreover, a parity checker which can identify even numbers and odd numbers from natural numbers was established successfully. This work helps elucidate the design rules by which simple logic can be harnessed to produce diverse and complex calculations by rewiring communication between different gates. Together, our system may serve as a promising proof of principle that demonstrates increased computational complexity by linking multiple logic gates together.
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Affiliation(s)
- Ru-Ru Gao
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , Department of Chemistry , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Shuo Shi
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , Department of Chemistry , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Ying Zhu
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , Department of Chemistry , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Hai-Liang Huang
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , Department of Chemistry , Tongji University , Shanghai , 200092 , P. R. China . ;
| | - Tian-Ming Yao
- Shanghai Key Laboratory of Chemical Assessment and Sustainability , Department of Chemistry , Tongji University , Shanghai , 200092 , P. R. China . ;
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17
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Afrasiabi R, Kraatz HB. Rational Design and Application of a Redox-Active, Photoresponsive, Discrete Metallogelator. Chemistry 2015; 21:7695-700. [DOI: 10.1002/chem.201500704] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2015] [Indexed: 12/25/2022]
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18
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Franco C, Mas-Torrent M, Caballero A, Espinosa A, Molina P, Veciana J, Rovira C. Pyrene-Based Dyad and Triad Leading to a Reversible Chemical and Redox Optical and Magnetic Switch. Chemistry 2015; 21:5504-9. [DOI: 10.1002/chem.201405993] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2014] [Indexed: 11/08/2022]
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19
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Sk MP, Sailapu SK, Chattopadhyay A. Luminescent Carbon Dots for Logic Operations in Two Phases. Chemphyschem 2015; 16:723-7. [DOI: 10.1002/cphc.201402747] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Indexed: 11/06/2022]
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20
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Chen Y, Song Y, Wu F, Liu W, Fu B, Feng B, Zhou X. A DNA logic gate based on strand displacement reaction and rolling circle amplification, responding to multiple low-abundance DNA fragment input signals, and its application in detecting miRNAs. Chem Commun (Camb) 2015; 51:6980-3. [DOI: 10.1039/c5cc01389e] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
A conveniently amplified DNA AND logic gate platform was designed for the highly sensitive detection of low-abundance DNA fragment inputs based on strand displacement reaction and rolling circle amplification strategy.
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Affiliation(s)
- Yuqi Chen
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Yanyan Song
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Fan Wu
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Wenting Liu
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Boshi Fu
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Bingkun Feng
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
| | - Xiang Zhou
- College of Chemistry and Molecular Sciences
- Institute of Advanced Studies
- Wuhan University
- Wuhan
- P. R. China
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21
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Mondal PC. Optical and electrochemical properties of covalent assembled bis(4′-carboxylic phenyl terpyridyl) Ru(ii)-monolayer. NEW J CHEM 2015. [DOI: 10.1039/c5nj01421b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Monomolecular layers of Ru(ii)-4′carboxylicphenyl-terpyridyl complex are prepared on glass and ITO-coated glass substrates. The optical, electrochemical and stability studies indicate that the present system is highly robust.
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22
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Ding Y, Li X, Hill JP, Ariga K, Ågren H, Andréasson J, Zhu W, Tian H, Xie Y. Acid/Base Switching of the Tautomerism and Conformation of a Dioxoporphyrin for Integrated Binary Subtraction. Chemistry 2014; 20:12910-6. [DOI: 10.1002/chem.201403830] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Indexed: 01/28/2023]
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23
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Elstner M, Axthelm J, Schiller A. Sugar-based molecular computing by material implication. Angew Chem Int Ed Engl 2014; 53:7339-43. [PMID: 24924187 DOI: 10.1002/anie.201403769] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2014] [Indexed: 11/11/2022]
Abstract
A method to integrate an (in principle) unlimited number of molecular logic gates to construct complex circuits is presented. Logic circuits, such as half- or full-adders, can be reinterpreted by using the functional completeness of the implication function (IMP) and the trivial FALSE operation. The molecular gate IMP is represented by a fluorescent boronic acid sugar probe. An external wiring algorithm translates the fluorescent output from one gate into a chemical input for the next gate on microtiter plates. This process is demonstrated on a four-bit full adder.
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Affiliation(s)
- Martin Elstner
- Institute for Inorganic and Analytical Chemistry & Abbe Center of Photonics (ACP), Friedrich Schiller University Jena, Humboldtstrasse 8, 07743 Jena (Germany)
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24
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Elstner M, Axthelm J, Schiller A. Zuckerbasierter molekularer Rechner mit Implikationslogik. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201403769] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Martin Elstner
- Institut für Anorganische und Analytische Chemie und Abbe Center of Photonics (ACP), Friedrich‐Schiller‐Universität Jena, Humboldtstraße 8, 07743 Jena (Deutschland)
| | - Jörg Axthelm
- Institut für Anorganische und Analytische Chemie und Abbe Center of Photonics (ACP), Friedrich‐Schiller‐Universität Jena, Humboldtstraße 8, 07743 Jena (Deutschland)
| | - Alexander Schiller
- Institut für Anorganische und Analytische Chemie und Abbe Center of Photonics (ACP), Friedrich‐Schiller‐Universität Jena, Humboldtstraße 8, 07743 Jena (Deutschland)
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25
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Mondal PC, Singh V, Shankar B. Fe-terpyridyl complex based multiple switches for application in molecular logic gates and circuits. NEW J CHEM 2014. [DOI: 10.1039/c4nj00121d] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The Fe(ii)-terpyridyl binary complex is used as a molecular switch upon external chemical stimuli. The stability of different switching states, their reversibility upon further chemical stimulus, prompted construction of solution based molecular logic gates and circuits.
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Affiliation(s)
- Prakash Chandra Mondal
- Department of Chemistry
- University of Delhi
- Delhi-110007, India
- Department of Chemical Physics
- Weizmann Institute of Science
| | - Vikram Singh
- Department of Chemistry
- University of Delhi
- Delhi-110007, India
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26
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Fabre B, Li Y, Scheres L, Pujari SP, Zuilhof H. Light-Activated Electroactive Molecule-Based Memory Microcells Confined on a Silicon Surface. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201304688] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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27
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Fabre B, Li Y, Scheres L, Pujari SP, Zuilhof H. Light-Activated Electroactive Molecule-Based Memory Microcells Confined on a Silicon Surface. Angew Chem Int Ed Engl 2013; 52:12024-7. [DOI: 10.1002/anie.201304688] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2013] [Indexed: 11/06/2022]
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28
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Erbas-Cakmak S, Akkaya EU. Cascading of Molecular Logic Gates for Advanced Functions: A Self-Reporting, Activatable Photosensitizer. Angew Chem Int Ed Engl 2013; 52:11364-8. [DOI: 10.1002/anie.201306177] [Citation(s) in RCA: 126] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2013] [Indexed: 11/10/2022]
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29
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Erbas-Cakmak S, Akkaya EU. Cascading of Molecular Logic Gates for Advanced Functions: A Self-Reporting, Activatable Photosensitizer. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201306177] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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30
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Erbas-Cakmak S, Bozdemir OA, Cakmak Y, Akkaya EU. Proof of principle for a molecular 1 : 2 demultiplexer to function as an autonomously switching theranostic device. Chem Sci 2013. [DOI: 10.1039/c2sc21499g] [Citation(s) in RCA: 99] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
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31
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Using Thermally Regenerable Cerium Oxide Nanoparticles in Biocomputing to Perform Label-free, Resettable, and Colorimetric Logic Operations. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201207587] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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32
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Lin Y, Xu C, Ren J, Qu X. Using Thermally Regenerable Cerium Oxide Nanoparticles in Biocomputing to Perform Label-free, Resettable, and Colorimetric Logic Operations. Angew Chem Int Ed Engl 2012; 51:12579-83. [DOI: 10.1002/anie.201207587] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2012] [Indexed: 01/23/2023]
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33
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Mahato P, Saha S, Choudhury S, Das A. Interfacial and Film-Formation Behaviour of Photoactive RuII-Bipyridyl-Based Metallosurfactants and a Rare Example of a Monolayer-Based Logic-Gate Approach. Chempluschem 2012. [DOI: 10.1002/cplu.201200207] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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34
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de Ruiter G, van der Boom ME. Orthogonal Addressable Monolayers for Integrating Molecular Logic. Angew Chem Int Ed Engl 2012; 51:8598-601. [DOI: 10.1002/anie.201203342] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2012] [Revised: 06/06/2012] [Indexed: 11/10/2022]
Affiliation(s)
- Graham de Ruiter
- Department of Organic Chemistry, Weizmann Institute of Science, 76100 Rehovot (Israel) https://sites.google.com/site/milkovanderboomslab/
| | - Milko E. van der Boom
- Department of Organic Chemistry, Weizmann Institute of Science, 76100 Rehovot (Israel) https://sites.google.com/site/milkovanderboomslab/
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35
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de Ruiter G, van der Boom ME. Orthogonal Addressable Monolayers for Integrating Molecular Logic. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201203342] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Graham de Ruiter
- Department of Organic Chemistry, Weizmann Institute of Science, 76100 Rehovot (Israel) https://sites.google.com/site/milkovanderboomslab/
| | - Milko E. van der Boom
- Department of Organic Chemistry, Weizmann Institute of Science, 76100 Rehovot (Israel) https://sites.google.com/site/milkovanderboomslab/
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36
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Pischel U, Andréasson J, Gust D, Pais VF. Information Processing with Molecules-Quo Vadis? Chemphyschem 2012; 14:28-46. [DOI: 10.1002/cphc.201200157] [Citation(s) in RCA: 107] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2012] [Revised: 04/16/2012] [Indexed: 11/11/2022]
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37
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Park KM, Kim C, Thomas SW, Yoon HJ, Morrison G, Mahadevan L, Whitesides GM. New encoding schemes with infofuses. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2011; 23:4851-4856. [PMID: 21959953 DOI: 10.1002/adma.201103045] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2011] [Indexed: 05/31/2023]
Affiliation(s)
- Kyeng Min Park
- Department of Chemistry and Chemical Biology, Wyss Institute for Biologically Inspired Engineering, Harvard University, Cambridge, MA 02138, USA
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38
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Guliyev R, Ozturk S, Kostereli Z, Akkaya EU. From Virtual to Physical: Integration of Chemical Logic Gates. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201104228] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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39
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Guliyev R, Ozturk S, Kostereli Z, Akkaya EU. From Virtual to Physical: Integration of Chemical Logic Gates. Angew Chem Int Ed Engl 2011; 50:9826-31. [DOI: 10.1002/anie.201104228] [Citation(s) in RCA: 109] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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40
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41
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42
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Ashkenasy G, Dadon Z, Alesebi S, Wagner N, Ashkenasy N. Building Logic into Peptide Networks: Bottom-Up and Top-Down. Isr J Chem 2011. [DOI: 10.1002/ijch.201000071] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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43
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Sreejith S, Divya KP, Manojkumar TK, Ajayaghosh A. Multiple Analyte Response and Molecular Logic Operations by Excited-State Charge-Transfer Modulation in a Bipyridine Integrated Fluorophore. Chem Asian J 2010; 6:430-7. [DOI: 10.1002/asia.201000637] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2010] [Indexed: 11/06/2022]
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44
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Electrically Addressable Multistate Volatile Memory with Flip-Flop and Flip-Flap-Flop Logic Circuits on a Solid Support. Angew Chem Int Ed Engl 2010; 49:4780-3. [DOI: 10.1002/anie.201000785] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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45
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de Ruiter G, Motiei L, Choudhury J, Oded N, van der Boom M. Electrically Addressable Multistate Volatile Memory with Flip-Flop and Flip-Flap-Flop Logic Circuits on a Solid Support. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.201000785] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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46
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Zigah D, Herrier C, Scheres L, Giesbers M, Fabre B, Hapiot P, Zuilhof H. Tuning the Electronic Communication between Redox Centers Bound to Insulating Surfaces. Angew Chem Int Ed Engl 2010; 49:3157-60. [DOI: 10.1002/anie.200906924] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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47
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Zigah D, Herrier C, Scheres L, Giesbers M, Fabre B, Hapiot P, Zuilhof H. Tuning the Electronic Communication between Redox Centers Bound to Insulating Surfaces. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.200906924] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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48
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Liu Y, Offenhäusser A, Mayer D. An Electrochemically Transduced XOR Logic Gate at the Molecular Level. Angew Chem Int Ed Engl 2010; 49:2595-8. [DOI: 10.1002/anie.200906333] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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49
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Liu Y, Offenhäusser A, Mayer D. An Electrochemically Transduced XOR Logic Gate at the Molecular Level. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.200906333] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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50
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de Ruiter G, Tartakovsky E, Oded N, van der Boom ME. Sequential logic operations with surface-confined polypyridyl complexes displaying molecular random access memory features. Angew Chem Int Ed Engl 2010; 49:169-72. [PMID: 19921670 DOI: 10.1002/anie.200905358] [Citation(s) in RCA: 110] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Graham de Ruiter
- Department of Organic Chemistry, Weizmann Institute of Science, 76100 Rehovot, Israel
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