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Souza JCP, Macedo LJA, Hassan A, Sedenho GC, Modenez IA, Crespilho FN. In Situ
and
Operando
Techniques for Investigating Electron Transfer in Biological Systems. ChemElectroChem 2020. [DOI: 10.1002/celc.202001327] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- João C. P. Souza
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
- Campus Rio Verde Goiano Federal Institute of Education, Science and Technology 75901-970 Rio Verde Goiás Brazil
| | - Lucyano J. A. Macedo
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
| | - Ayaz Hassan
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
| | - Graziela C. Sedenho
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
| | - Iago A. Modenez
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
| | - Frank N. Crespilho
- São Carlos Institute of Chemistry University of São Paulo 13560-970 São Carlos São Paulo Brazil
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Bond AM. A perceived paucity of quantitative studies in the modern era of voltammetry: prospects for parameterisation of complex reactions in Bayesian and machine learning frameworks. J Solid State Electrochem 2020. [DOI: 10.1007/s10008-020-04639-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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3
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Fan S, Webb JEA, Yang Y, Nieves DJ, Gonçales VR, Tran J, Hilzenrat G, Kahram M, Tilley RD, Gaus K, Gooding JJ. Observing the Reversible Single Molecule Electrochemistry of Alexa Fluor 647 Dyes by Total Internal Reflection Fluorescence Microscopy. Angew Chem Int Ed Engl 2019; 58:14495-14498. [DOI: 10.1002/anie.201907298] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Revised: 08/08/2019] [Indexed: 01/04/2023]
Affiliation(s)
- Sanjun Fan
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - James E. A. Webb
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Ying Yang
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Daniel J. Nieves
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Vinicius R. Gonçales
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Jason Tran
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Geva Hilzenrat
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Mohaddeseh Kahram
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Richard D. Tilley
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Katharina Gaus
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - J. Justin Gooding
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
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Fan S, Webb JEA, Yang Y, Nieves DJ, Gonçales VR, Tran J, Hilzenrat G, Kahram M, Tilley RD, Gaus K, Gooding JJ. Observing the Reversible Single Molecule Electrochemistry of Alexa Fluor 647 Dyes by Total Internal Reflection Fluorescence Microscopy. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201907298] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Sanjun Fan
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - James E. A. Webb
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Ying Yang
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Daniel J. Nieves
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Vinicius R. Gonçales
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Jason Tran
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Geva Hilzenrat
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - Mohaddeseh Kahram
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Richard D. Tilley
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
| | - Katharina Gaus
- EMBL Australia Node in Single Molecule Science and ARC Centre of Excellence in Advanced Molecular Imaging University of New South Wales Sydney NSW 2052 Australia
| | - J. Justin Gooding
- School of Chemistry Australian Centre for NanoMedicine and The ARC Centre of Excellence in Convergent Bio-Nano Science and Technology University of New South Wales Sydney NSW 2052 Australia
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Garoz‐Ruiz J, Perales‐Rondon JV, Heras A, Colina A. Spectroelectrochemical Sensing: Current Trends and Challenges. ELECTROANAL 2019. [DOI: 10.1002/elan.201900075] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Jesus Garoz‐Ruiz
- Department of ChemistryUniversidad de Burgos Pza. Misael Bañuelos s/n E-09001 Burgos Spain
| | | | - Aranzazu Heras
- Department of ChemistryUniversidad de Burgos Pza. Misael Bañuelos s/n E-09001 Burgos Spain
| | - Alvaro Colina
- Department of ChemistryUniversidad de Burgos Pza. Misael Bañuelos s/n E-09001 Burgos Spain
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Yates NDJ, Fascione MA, Parkin A. Methodologies for "Wiring" Redox Proteins/Enzymes to Electrode Surfaces. Chemistry 2018; 24:12164-12182. [PMID: 29637638 PMCID: PMC6120495 DOI: 10.1002/chem.201800750] [Citation(s) in RCA: 69] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2018] [Indexed: 12/22/2022]
Abstract
The immobilization of redox proteins or enzymes onto conductive surfaces has application in the analysis of biological processes, the fabrication of biosensors, and in the development of green technologies and biochemical synthetic approaches. This review evaluates the methods through which redox proteins can be attached to electrode surfaces in a "wired" configuration, that is, one that facilitates direct electron transfer. The feasibility of simple electroactive adsorption onto a range of electrode surfaces is illustrated, with a highlight on the recent advances that have been achieved in biotechnological device construction using carbon materials and metal oxides. The covalent crosslinking strategies commonly used for the modification and biofunctionalization of electrode surfaces are also evaluated. Recent innovations in harnessing chemical biology methods for electrically wiring redox biology to surfaces are emphasized.
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Affiliation(s)
| | | | - Alison Parkin
- Department of ChemistryUniversity of YorkHeslington RoadYorkYO10 5DDUK
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Zhang W, Caldarola M, Pradhan B, Orrit M. Gold Nanorod Enhanced Fluorescence Enables Single‐Molecule Electrochemistry of Methylene Blue. Angew Chem Int Ed Engl 2017; 56:3566-3569. [DOI: 10.1002/anie.201612389] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Indexed: 11/12/2022]
Affiliation(s)
- Weichun Zhang
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Martín Caldarola
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Biswajit Pradhan
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Michel Orrit
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
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8
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Zhang W, Caldarola M, Pradhan B, Orrit M. Gold Nanorod Enhanced Fluorescence Enables Single‐Molecule Electrochemistry of Methylene Blue. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201612389] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Weichun Zhang
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Martín Caldarola
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Biswajit Pradhan
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
| | - Michel Orrit
- Huygens-Kamerlingh Onnes Laboratory Leiden University 2300 RA Leiden The Netherlands
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Affiliation(s)
- Stephen M. Oja
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States
| | - Yunshan Fan
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States
| | - Chadd M. Armstrong
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States
| | - Peter Defnet
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States
| | - Bo Zhang
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, United States
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Morris GP, Baker RE, Gillow K, Davis JJ, Gavaghan DJ, Bond AM. Theoretical Analysis of the Relative Significance of Thermodynamic and Kinetic Dispersion in the dc and ac Voltammetry of Surface-Confined Molecules. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:4996-5004. [PMID: 25853230 DOI: 10.1021/la5042635] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Commonly, significant discrepancies are reported in theoretical and experimental comparisons of dc voltammograms derived from a monolayer or close to monolayer coverage of redox-active surface-confined molecules. For example, broader-than-predicted voltammetric wave shapes are attributed to the thermodynamic or kinetic dispersion derived from distributions in reversible potentials (E(0)) and electrode kinetics (k(0)), respectively. The recent availability of experimentally estimated distributions of E(0) and k(0) values derived from the analysis of data for small numbers of surface-confined modified azurin metalloprotein molecules now allows more realistic modeling to be undertaken, assuming the same distributions apply under conditions of high surface coverage relevant to voltammetric experiments. In this work, modeling based on conventional and stochastic kinetic theory is considered, and the computationally far more efficient conventional model is shown to be equivalent to the stochastic one when large numbers of molecules are present. Perhaps unexpectedly, when experimentally determined distributions of E(0) and k(0) are input into the model, thermodynamic dispersion is found to be unimportant and only kinetic dispersion contributes significantly to the broadening of dc voltammograms. Simulations of ac voltammetric experiments lead to the conclusion that the ac method, particularly when the analysis of kinetically very sensitive higher-order harmonics is undertaken, are far more sensitive to kinetic dispersion than the dc method. ac methods are therefore concluded to provide a potentially superior strategy for addressing the inverse problem of determining the k(0) distribution that could give rise to the apparent anomalies in surface-confined voltammetry.
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Affiliation(s)
- Graham P Morris
- †Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford, OX2 6GG U.K
| | - Ruth E Baker
- †Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford, OX2 6GG U.K
| | - Kathryn Gillow
- †Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford, OX2 6GG U.K
| | - Jason J Davis
- ‡Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford, OX1 3QZ U.K
| | - David J Gavaghan
- §Department of Computer Science, University of Oxford, Wolfson Building, Parks Road, Oxford, OX1 3QD U.K
| | - Alan M Bond
- ∥School of Chemistry, Monash University, Clayton, Vic. 3800, Australia
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Artés JM, López-Martínez M, Díez-Pérez I, Sanz F, Gorostiza P. Nanoscale charge transfer in redox proteins and DNA: Towards biomolecular electronics. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2014.05.089] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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12
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Patil AV, Premaraban T, Berthoumieu O, Watts A, Davis JJ. Engineered Bacteriorhodopsin: A Molecular Scale Potential Switch. Chemistry 2012; 18:5632-6. [DOI: 10.1002/chem.201103597] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2011] [Revised: 02/24/2012] [Indexed: 11/10/2022]
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13
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Tabares LC, Kostrz D, Elmalk A, Andreoni A, Dennison C, Aartsma TJ, Canters GW. Fluorescence lifetime analysis of nitrite reductase from Alcaligenes xylosoxidans at the single-molecule level reveals the enzyme mechanism. Chemistry 2011; 17:12015-9. [PMID: 21922585 DOI: 10.1002/chem.201102063] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2011] [Indexed: 11/08/2022]
Affiliation(s)
- Leandro C Tabares
- Leiden Institute of Physics, Huygens Laboratory, Leiden University, Niels Bohrweg 2, 2333CA Leiden, The Netherlands.
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