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Perez SJLP, Chen CL, Chang TT, Li WS. Biological evaluation of sulfonate and sulfate analogues of lithocholic acid: A bioisosterism-guided approach towards the discovery of potential sialyltransferase inhibitors for antimetastatic study. Bioorg Med Chem Lett 2024; 105:129760. [PMID: 38641151 DOI: 10.1016/j.bmcl.2024.129760] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2023] [Revised: 02/12/2024] [Accepted: 04/16/2024] [Indexed: 04/21/2024]
Abstract
The naturally occurring bile acid lithocholic acid (LCA) has been a crucial core structure for many non-sugar-containing sialyltranferase (ST) inhibitors documented in literature. With the aim of elucidating the impact of the terminal carboxyl acid substituent of LCA on its ST inhibition, in this present study, we report the (bio)isosteric replacement-based design and synthesis of sulfonate and sulfate analogues of LCA. Among these compounds, the sulfate analogue SPP-002 was found to selectively inhibit N-glycan sialylation by at least an order of magnitude, indicating a substantial improvement in both potency and selectivity when compared to the unmodified parent bile acid. Molecular docking analysis supported the stronger binding of the synthetic analogue in the enzyme active site. Treatment with SPP-002 also hampered the migration, adhesion, and invasion of MDA-MB-231 cells in vitro by suppressing the expression of signaling proteins involved in the cancer metastasis-associated integrin/FAK/paxillin pathway. In totality, these findings offer not only a novel structural scaffold but also valuable insights for the future development of more potent and selective ST inhibitors with potential therapeutic effects against tumor cancer metastasis.
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Affiliation(s)
- Ser John Lynon P Perez
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan; Department of Applied Chemistry, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan; Sustainable Chemical Science and Technology, Taiwan International Graduate Program, Academia Sinica, Taipei 115, Taiwan; Biomedical Translation Research Center, Academia Sinica, Taipei 115, Taiwan
| | - Chia-Ling Chen
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan
| | - Tzu-Ting Chang
- Biomedical Translation Research Center, Academia Sinica, Taipei 115, Taiwan
| | - Wen-Shan Li
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan; Sustainable Chemical Science and Technology, Taiwan International Graduate Program, Academia Sinica, Taipei 115, Taiwan; Biomedical Translation Research Center, Academia Sinica, Taipei 115, Taiwan; Department of Medicinal and Applied Chemistry, College of Life Science, Kaohsiung Medical University, Kaohsiung 807, Taiwan; Ph.D. Program in Drug Discovery and Development Industry, College of Pharmacy, Taipei Medical University; Doctoral Degree Program in Marine Biotechnology, National Sun Yat-Sen University, Kaohsiung 804, Taiwan; Department of Chemistry, College of Science, Tamkang University, New Taipei City 251, Taiwan.
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2
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Harduin-Lepers A. The vertebrate sialylation machinery: structure-function and molecular evolution of GT-29 sialyltransferases. Glycoconj J 2023; 40:473-492. [PMID: 37247156 PMCID: PMC10225777 DOI: 10.1007/s10719-023-10123-w] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 03/09/2023] [Accepted: 05/10/2023] [Indexed: 05/30/2023]
Abstract
Every eukaryotic cell is covered with a thick layer of complex carbohydrates with essential roles in their social life. In Deuterostoma, sialic acids present at the outermost positions of glycans of glycoconjugates are known to be key players in cellular interactions including host-pathogen interactions. Their negative charge and hydrophilic properties enable their roles in various normal and pathological states and their expression is altered in many diseases including cancers. Sialylation of glycoproteins and glycolipids is orchestrated by the regulated expression of twenty sialyltransferases in human tissues with distinct enzymatic characteristics and preferences for substrates and linkages formed. However, still very little is known on the functional organization of sialyltransferases in the Golgi apparatus and how the sialylation machinery is finely regulated to provide the ad hoc sialome to the cell. This review summarizes current knowledge on sialyltransferases, their structure-function relationships, molecular evolution, and their implications in human biology.
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Affiliation(s)
- Anne Harduin-Lepers
- Univ. Lille, CNRS, UMR 8576 - UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F-59000, Lille, France.
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3
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Yin X, Li J, Chen S, Wu Y, She Z, Liu L, Wang Y, Gao Z. An Economical High-Throughput "FP-Tag" Assay for Screening Glycosyltransferase Inhibitors*. Chembiochem 2021; 22:1391-1395. [PMID: 33259119 DOI: 10.1002/cbic.202000746] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Revised: 11/29/2020] [Indexed: 11/10/2022]
Abstract
O-GlcNAc transferase (OGT) is involved in many cellular processes, and selective OGT inhibitors are valuable tools to investigate O-GlcNAcylation functions, and could potentially lead to therapeutics. However, high-throughput OGT assays that are suitable for large-scale HTS and can identify inhibitors targeting both acceptor, donor sites, and allosteric binding-sites are still lacking. Here, we report the development of a high-throughput "FP-Tag" OGT assay with bovine serum albumin (BSA) as a low-cost and superior "FP-Tag". With this assay, 2-methyleurotinone was identified as a low-micromolar OGT inhibitor. This type of assay with BSA as "FP-Tag" would find more applications with other glycosyltransferases.
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Affiliation(s)
- Xinjian Yin
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China
| | - Jiaxin Li
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China
| | - Senhua Chen
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China
| | - Yuping Wu
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China
| | - Zhigang She
- School of Chemistry, Sun Yat-sen University, 519275, Guangzhou, P. R. China
| | - Lan Liu
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China.,Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), 519080, Zhuhai, P. R. China
| | - Yue Wang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Rd No. 38, 100191, Beijing, P. R. China
| | - Zhizeng Gao
- School of Marine Science, Sun Yat-sen University, 519080, Zhuhai, P. R. China.,Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), 519080, Zhuhai, P. R. China
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4
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Alteen MG, Gros C, Meek RW, Cardoso DA, Busmann JA, Sangouard G, Deen MC, Tan H, Shen DL, Russell CC, Davies GJ, Robinson PJ, McCluskey A, Vocadlo DJ. A Direct Fluorescent Activity Assay for Glycosyltransferases Enables Convenient High‐Throughput Screening: Application to
O
‐GlcNAc Transferase. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000621] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Matthew G. Alteen
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Christina Gros
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Richard W. Meek
- York Structural Biology Laboratory Department of Chemistry University of York York YO10 5DD UK
| | - David A. Cardoso
- Children's Medical Research Institute The University of Sydney Sydney NSW 2145 Australia
| | - Jil A. Busmann
- Department of Molecular Biology and Biochemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Gontran Sangouard
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Matthew C. Deen
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Hong‐Yee Tan
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - David L. Shen
- Department of Molecular Biology and Biochemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
| | - Cecilia C. Russell
- Chemistry, School of Environmental and Life Sciences The University of Newcastle University Drive Callaghan NSW 2308 Australia
| | - Gideon J. Davies
- York Structural Biology Laboratory Department of Chemistry University of York York YO10 5DD UK
| | - Phillip J. Robinson
- Children's Medical Research Institute The University of Sydney Sydney NSW 2145 Australia
| | - Adam McCluskey
- Chemistry, School of Environmental and Life Sciences The University of Newcastle University Drive Callaghan NSW 2308 Australia
| | - David J. Vocadlo
- Department of Chemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
- Department of Molecular Biology and Biochemistry Simon Fraser University Burnaby BC V5A 1S6 Canada
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5
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Alteen MG, Gros C, Meek RW, Cardoso DA, Busmann JA, Sangouard G, Deen MC, Tan H, Shen DL, Russell CC, Davies GJ, Robinson PJ, McCluskey A, Vocadlo DJ. A Direct Fluorescent Activity Assay for Glycosyltransferases Enables Convenient High‐Throughput Screening: Application toO‐GlcNAc Transferase. Angew Chem Int Ed Engl 2020; 59:9601-9609. [DOI: 10.1002/anie.202000621] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Revised: 02/13/2020] [Indexed: 12/27/2022]
Affiliation(s)
- Matthew G. Alteen
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Christina Gros
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Richard W. Meek
- York Structural Biology LaboratoryDepartment of ChemistryUniversity of York York YO10 5DD UK
| | - David A. Cardoso
- Children's Medical Research InstituteThe University of Sydney Sydney NSW 2145 Australia
| | - Jil A. Busmann
- Department of Molecular Biology and BiochemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Gontran Sangouard
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Matthew C. Deen
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Hong‐Yee Tan
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - David L. Shen
- Department of Molecular Biology and BiochemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
| | - Cecilia C. Russell
- Chemistry, School of Environmental and Life SciencesThe University of Newcastle University Drive Callaghan NSW 2308 Australia
| | - Gideon J. Davies
- York Structural Biology LaboratoryDepartment of ChemistryUniversity of York York YO10 5DD UK
| | - Phillip J. Robinson
- Children's Medical Research InstituteThe University of Sydney Sydney NSW 2145 Australia
| | - Adam McCluskey
- Chemistry, School of Environmental and Life SciencesThe University of Newcastle University Drive Callaghan NSW 2308 Australia
| | - David J. Vocadlo
- Department of ChemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
- Department of Molecular Biology and BiochemistrySimon Fraser University Burnaby BC V5A 1S6 Canada
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Wratil PR, Horstkorte R, Reutter W. Metabolic Glycoengineering with N-Acyl Side Chain Modified Mannosamines. Angew Chem Int Ed Engl 2016; 55:9482-512. [PMID: 27435524 DOI: 10.1002/anie.201601123] [Citation(s) in RCA: 99] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2016] [Indexed: 12/14/2022]
Abstract
In metabolic glycoengineering (MGE), cells or animals are treated with unnatural derivatives of monosaccharides. After entering the cytosol, these sugar analogues are metabolized and subsequently expressed on newly synthesized glycoconjugates. The feasibility of MGE was first discovered for sialylated glycans, by using N-acyl-modified mannosamines as precursor molecules for unnatural sialic acids. Prerequisite is the promiscuity of the enzymes of the Roseman-Warren biosynthetic pathway. These enzymes were shown to tolerate specific modifications of the N-acyl side chain of mannosamine analogues, for example, elongation by one or more methylene groups (aliphatic modifications) or by insertion of reactive groups (bioorthogonal modifications). Unnatural sialic acids are incorporated into glycoconjugates of cells and organs. MGE has intriguing biological consequences for treated cells (aliphatic MGE) and offers the opportunity to visualize the topography and dynamics of sialylated glycans in vitro, ex vivo, and in vivo (bioorthogonal MGE).
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Affiliation(s)
- Paul R Wratil
- Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie, Charité-Universitätsmedizin Berlin, Arnimallee 22, 14195, Berlin, Germany.
| | - Rüdiger Horstkorte
- Institut für Physiologische Chemie, Martin-Luther-Universität Halle-Wittenberg, Hollystrasse 1, 06114, Halle, Germany.
| | - Werner Reutter
- Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie, Charité-Universitätsmedizin Berlin, Arnimallee 22, 14195, Berlin, Germany
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7
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Wratil PR, Horstkorte R, Reutter W. Metabolisches Glykoengineering mitN-Acyl-Seiten- ketten-modifizierten Mannosaminen. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201601123] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Paul R. Wratil
- Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie; Charité - Universitätsmedizin Berlin; Arnimallee 22 14195 Berlin Deutschland
| | - Rüdiger Horstkorte
- Institut für Physiologische Chemie; Martin-Luther-Universität Halle-Wittenberg; Hollystraße 1 06114 Halle Deutschland
| | - Werner Reutter
- Institut für Laboratoriumsmedizin, Klinische Chemie und Pathobiochemie; Charité - Universitätsmedizin Berlin; Arnimallee 22 14195 Berlin Deutschland
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8
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Solera C, Macchione G, Maza S, Kayser MM, Corzana F, de Paz JL, Nieto PM. Chondroitin Sulfate Tetrasaccharides: Synthesis, Three-Dimensional Structure and Interaction with Midkine. Chemistry 2016; 22:2356-69. [DOI: 10.1002/chem.201504440] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2015] [Indexed: 12/20/2022]
Affiliation(s)
- Cristina Solera
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
| | - Giuseppe Macchione
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
| | - Susana Maza
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
| | - M. Mar Kayser
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
| | - Francisco Corzana
- Departamento de Química; Centro de Investigación en Síntesis Química; Universidad de La Rioja; Madre de Dios, 51 26006 Logroño Spain
| | - José L. de Paz
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
| | - Pedro M. Nieto
- Glycosystems Laboratory; Instituto de Investigaciones Químicas (IIQ); cicCartuja, CSIC and Universidad de Sevilla; Americo Vespucio, 49 41092 Sevilla Spain
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9
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Seelhorst K, Pahnke K, Meier C, Hahn U. Tagging Glycoproteins with Fluorescently Labeled GDP-Fucoses by Using α1,3-Fucosyltransferases. Chembiochem 2015; 16:1919-1924. [PMID: 26111108 DOI: 10.1002/cbic.201500275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Indexed: 11/08/2022]
Abstract
Fucose-containing glycans mediate a variety of biological processes, but there is little information on reaction processes and mechanisms mediated by fucosyltransferases. We recently reported on fluorescently labeled GDP-β-L-fucose-ATTO 550, which enabled monitoring of α1,3-fucosyltransferase activity. Here we present an extension to the previously described results, based on the synthesis of a fluorescein-isothiocyanate (FITC)-labeled and two carboxyfluorescein-labeled (FAM-labeled) NDP-β-L-fucose derivatives, and applied all four compounds in labeling of different glycoproteins with the aid of four different fucosyltransferases. The labeling processes were analyzed by in-gel fluorescence and fluorescence polarization measurements. Comparison with the ATTO-labeled sugar revealed that the FITC-labeled fucose was the best of these substrates, and that the bacterial enzyme HP-FucT tolerated the fluorescent substrates better than human fucosyltransferases.
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Affiliation(s)
- Katrin Seelhorst
- Biochemistry, Department of Chemistry, Faculty of Sciences, Hamburg University, Martin-Luther-King-Platz 6, 20146 Hamburg (Germany)
| | - Katharina Pahnke
- Organic Chemistry, Department of Chemistry, Faculty of Sciences, Hamburg University, Martin-Luther-King-Platz 6, 20146 Hamburg (Germany)
| | - Chris Meier
- Organic Chemistry, Department of Chemistry, Faculty of Sciences, Hamburg University, Martin-Luther-King-Platz 6, 20146 Hamburg (Germany)
| | - Ulrich Hahn
- Biochemistry, Department of Chemistry, Faculty of Sciences, Hamburg University, Martin-Luther-King-Platz 6, 20146 Hamburg (Germany)
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Preidl JJ, Gnanapragassam VS, Lisurek M, Saupe J, Horstkorte R, Rademann J. Fluoreszente Mimetika von CMP-Neu5Ac sind hochaffine, zellgängige Polarisationssonden eukaryotischer und bakterieller Sialyltransferasen und inhibieren die zelluläre Sialylierung. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201400394] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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11
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Preidl JJ, Gnanapragassam VS, Lisurek M, Saupe J, Horstkorte R, Rademann J. Fluorescent mimetics of CMP-Neu5Ac are highly potent, cell-permeable polarization probes of eukaryotic and bacterial sialyltransferases and inhibit cellular sialylation. Angew Chem Int Ed Engl 2014; 53:5700-5. [PMID: 24737687 DOI: 10.1002/anie.201400394] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2014] [Indexed: 12/23/2022]
Abstract
Oligosaccharides of the glycolipids and glycoproteins at the outer membranes of human cells carry terminal neuraminic acids, which are responsible for recognition events and adhesion of cells, bacteria, and virus particles. The synthesis of neuraminic acid containing glycosides is accomplished by intracellular sialyl transferases. Therefore, the chemical manipulation of cellular sialylation could be very important to interfere with cancer development, inflammations, and infections. The development and applications of the first nanomolar fluorescent inhibitors of sialyl transferases are described herein. The obtained carbohydrate-nucleotide mimetics were found to bind all four commercially available and tested eukaryotic and bacterial sialyl transferases in a fluorescence polarization assay. Moreover, it was observed that the anionic mimetics intruded rapidly and efficiently into cells in vesicles and translocated to cellular organelles surrounding the nucleus of CHO cells. The new compounds inhibit cellular sialylation in two cell lines and open new perspectives for investigations of cellular sialylation.
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Affiliation(s)
- Johannes J Preidl
- Medicinal Chemistry, Freie Universität Berlin, Königin-Luise-Strasse 2+4, 14195 Berlin (Germany) http://www.bcp.fu-berlin.de/ag-rademann; Department of Medicinal Chemistry, Leibniz Institut für Molekulare Pharmakologie (FMP), Robert-Rössle-Strasse 10, 13125 Berlin (Germany)
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