1
|
Tellurium-Modified Nucleosides, Nucleotides, and Nucleic Acids with Potential Applications. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27238379. [PMID: 36500495 PMCID: PMC9737395 DOI: 10.3390/molecules27238379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 11/22/2022] [Accepted: 11/23/2022] [Indexed: 12/05/2022]
Abstract
Tellurium was successfully incorporated into proteins and applied to protein structure determination through X-ray crystallography. However, studies on tellurium modification of DNA and RNA are limited. This review highlights the recent development of Te-modified nucleosides, nucleotides, and nucleic acids, and summarizes the main synthetic approaches for the preparation of 5-PhTe, 2'-MeTe, and 2'-PhTe modifications. Those modifications are compatible with solid-phase synthesis and stable during Te-oligonucleotide purification. Moreover, the ideal electronic and atomic properties of tellurium for generating clear isomorphous signals give Te-modified DNA and RNA great potential applications in 3D crystal structure determination through X-ray diffraction. STM study also shows that Te-modified DNA has strong topographic and current peaks, which immediately suggests potential applications in nucleic acid direct imaging, nanomaterials, molecular electronics, and diagnostics. Theoretical studies indicate the potential application of Te-modified nucleosides in cancer therapy.
Collapse
|
2
|
Vogel L, Wonner P, Huber SM. Chalcogen Bonding: An Overview. Angew Chem Int Ed Engl 2018; 58:1880-1891. [PMID: 30225899 DOI: 10.1002/anie.201809432] [Citation(s) in RCA: 364] [Impact Index Per Article: 60.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Indexed: 01/23/2023]
Abstract
In the last few decades, "unusual" noncovalent interactions like anion-π and halogen bonding have emerged as interesting alternatives to the ubiquitous hydrogen bonding in many research areas. This is also true, to a somewhat lesser extent, for chalcogen bonding, the noncovalent interaction involving Lewis acidic chalcogen centers. Herein, we aim to provide an overview on the use of chalcogen bonding in crystal engineering and in solution, with a focus on the recent developments concerning intermolecular chalcogen bonding in solution-phase applications. In the solid phase, chalcogen bonding has been used for the construction of nano-sized structures and the self-assembly of sophisticated self-complementary arrays. In solution, until very recently applications mostly focused on intramolecular interactions which stabilized the conformation of intermediates or reagents. In the last few years, intermolecular chalcogen bonding has increasingly also been exploited in solution, most notably in anion recognition and transport as well as in organic synthesis and organocatalysis.
Collapse
Affiliation(s)
- Lukas Vogel
- Faculty of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstraße 150, 44801, Bochum, Germany
| | - Patrick Wonner
- Faculty of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstraße 150, 44801, Bochum, Germany
| | - Stefan M Huber
- Faculty of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstraße 150, 44801, Bochum, Germany
| |
Collapse
|
3
|
Affiliation(s)
- Lukas Vogel
- Fakultät für Chemie und Biochemie; Ruhr-Universität Bochum; Universitätsstraße 150 44801 Bochum Deutschland
| | - Patrick Wonner
- Fakultät für Chemie und Biochemie; Ruhr-Universität Bochum; Universitätsstraße 150 44801 Bochum Deutschland
| | - Stefan M. Huber
- Fakultät für Chemie und Biochemie; Ruhr-Universität Bochum; Universitätsstraße 150 44801 Bochum Deutschland
| |
Collapse
|
4
|
Kordts N, Künzler S, Rathjen S, Sieling T, Großekappenberg H, Schmidtmann M, Müller T. Silyl Chalconium Ions: Synthesis, Structure and Application in Hydrodefluorination Reactions. Chemistry 2017; 23:10068-10079. [DOI: 10.1002/chem.201700995] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Indexed: 11/09/2022]
Affiliation(s)
- Natalie Kordts
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Sandra Künzler
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Saskia Rathjen
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Thorben Sieling
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Henning Großekappenberg
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Marc Schmidtmann
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| | - Thomas Müller
- Institute of Chemistry; Carl von Ossietzky University Oldenburg; Carl von Ossietzky Str. 9-11 26211 Oldenburg Germany
| |
Collapse
|
5
|
Rusakova IL, Rusakov YY, Krivdin LB. First example of the correlated calculation of the one-bond tellurium-carbon spin-spin coupling constants: Relativistic effects, vibrational corrections, and solvent effects. J Comput Chem 2016; 37:1367-72. [DOI: 10.1002/jcc.24345] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2015] [Revised: 02/01/2016] [Accepted: 02/02/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Irina L. Rusakova
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences; Irkutsk 664033 Russian Federation
| | - Yury Yu. Rusakov
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences; Irkutsk 664033 Russian Federation
| | - Leonid B. Krivdin
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences; Irkutsk 664033 Russian Federation
| |
Collapse
|
6
|
Sutter K, Aucar GA, Autschbach J. Analysis of Proton NMR in Hydrogen Bonds in Terms of Lone-Pair and Bond Orbital Contributions. Chemistry 2015; 21:18138-55. [DOI: 10.1002/chem.201502346] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2015] [Indexed: 11/10/2022]
|
7
|
Li PF, Schon TB, Seferos DS. Thiophene, Selenophene, and Tellurophene-based Three-Dimensional Organic Frameworks. Angew Chem Int Ed Engl 2015; 54:9361-6. [DOI: 10.1002/anie.201503418] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Revised: 05/08/2015] [Indexed: 01/04/2023]
|
8
|
Thiophene, Selenophene, and Tellurophene-based Three-Dimensional Organic Frameworks. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503418] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
|
9
|
Chalmers BA, Bühl M, Athukorala Arachchige KS, Slawin AMZ, Kilian P. Structural, Spectroscopic and Computational Examination of the Dative Interaction in Constrained Phosphine-Stibines and Phosphine-Stiboranes. Chemistry 2015; 21:7520-31. [DOI: 10.1002/chem.201500281] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2015] [Indexed: 11/06/2022]
|
10
|
Uhl W, Wegener P, Layh M, Hepp A, Würthwein EU. Chalcogen Capture by an Al/P-Based Frustrated Lewis Pair: Formation of Al-E-P Bridges and Intermolecular Tellurium–Tellurium Interactions. Organometallics 2015. [DOI: 10.1021/om501206p] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Werner Uhl
- Institut für Anorganische und Analytische Chemie der Universität Münster, Corrensstraße
30, D-48149 Münster, Germany
| | - Philipp Wegener
- Institut für Anorganische und Analytische Chemie der Universität Münster, Corrensstraße
30, D-48149 Münster, Germany
| | - Marcus Layh
- Institut für Anorganische und Analytische Chemie der Universität Münster, Corrensstraße
30, D-48149 Münster, Germany
| | - Alexander Hepp
- Institut für Anorganische und Analytische Chemie der Universität Münster, Corrensstraße
30, D-48149 Münster, Germany
| | - Ernst-Ulrich Würthwein
- Organisch-chemisches Institut der Universität Münster, Corrensstraße 40, D-48149 Münster, Germany
| |
Collapse
|
11
|
Knight FR, Diamond LM, Arachchige KSA, Sanz Camacho P, Randall RAM, Ashbrook SE, Bühl M, Slawin AMZ, Woollins JD. Conformational Dependence of Through-Space Tellurium-Tellurium Spin-Spin Coupling inPeri-Substituted Bis(Tellurides). Chemistry 2014; 21:3613-27. [DOI: 10.1002/chem.201405599] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2014] [Indexed: 11/06/2022]
|
12
|
Athukorala Arachchige KS, Diamond LM, Knight FR, Lechner ML, Slawin AMZ, Woollins JD. Synthetic, Structural, and Spectroscopic Studies of Sterically Crowded Tin–Chalcogen Acenaphthenes. Organometallics 2014. [DOI: 10.1021/om500755w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | - Louise M. Diamond
- EaStCHEM, School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Fergus R. Knight
- EaStCHEM, School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Marie-Luise Lechner
- EaStCHEM, School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | | | - J. Derek Woollins
- EaStCHEM, School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| |
Collapse
|
13
|
Athukorala Arachchige KS, Sanz Camacho P, Ray MJ, Chalmers BA, Knight FR, Ashbrook SE, Bühl M, Kilian P, Slawin AMZ, Woollins JD. Sterically Restricted Tin Phosphines, Stabilized by Weak Intramolecular Donor–Acceptor Interactions. Organometallics 2014. [DOI: 10.1021/om500289b] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
| | - Paula Sanz Camacho
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Matthew J. Ray
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Brian A. Chalmers
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Fergus R. Knight
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Sharon E. Ashbrook
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Michael Bühl
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | - Petr Kilian
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| | | | - J. Derek Woollins
- EaSTCHEM,
School of Chemistry, University of St Andrews, St Andrews, Fife KY16 9ST, U.K
| |
Collapse
|
14
|
Stanford MW, Knight FR, Athukorala Arachchige KS, Sanz Camacho P, Ashbrook SE, Bühl M, Slawin AMZ, Woollins JD. Probing interactions through space using spin–spin coupling. Dalton Trans 2014; 43:6548-60. [DOI: 10.1039/c4dt00408f] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of eight 5-(TeAr)-6-(SePh)acenaphthenes (Ar = aryl) were prepared and structurally characterised by X-ray crystallography, solution and solid-state NMR spectroscopy and DFT/B3LYP calculations.
Collapse
Affiliation(s)
- Martin W. Stanford
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | - Fergus R. Knight
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | | | - Paula Sanz Camacho
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | - Sharon E. Ashbrook
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | - Michael Bühl
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | - Alexandra M. Z. Slawin
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| | - J. Derek Woollins
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance
- University of St Andrews
- St Andrews KY16 9ST, UK
| |
Collapse
|
15
|
Knight FR, Randall RAM, Roemmele TL, Boeré RT, Bode BE, Crawford L, Bühl M, Slawin AMZ, Woollins JD. Electrochemically informed synthesis: oxidation versus coordination of 5,6-bis(phenylchalcogeno)acenaphthenes. Chemphyschem 2013; 14:3199-203. [PMID: 23943606 DOI: 10.1002/cphc.201300678] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2013] [Indexed: 11/12/2022]
Abstract
Chalcogen dications: Facile synthesis of E--E bonded dications can be readily achieved. Radical cations are identified as the intermediates.
Collapse
Affiliation(s)
- Fergus R Knight
- EaStCHEM School of Chemistry and Centre for Magnetic Resonance, University of St Andrews, St Andrews KY16 9ST (UK), Fax: (+44) 1334 463808
| | | | | | | | | | | | | | | | | |
Collapse
|