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Seifried BM, Qi W, Yang YJ, Mai DJ, Puryear WB, Runstadler JA, Chen G, Olsen BD. Glycoprotein Mimics with Tunable Functionalization through Global Amino Acid Substitution and Copper Click Chemistry. Bioconjug Chem 2020; 31:554-566. [PMID: 32078297 DOI: 10.1021/acs.bioconjchem.9b00601] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Glycoproteins and their mimics are challenging to produce because of their large number of polysaccharide side chains that form a densely grafted protein-polysaccharide brush architecture. Herein a new approach to protein bioconjugate synthesis is demonstrated that can approach the functionalization densities of natural glycoproteins through oligosaccharide grafting. Global amino acid substitution is used to replace the methionine residues in a methionine-enriched elastin-like polypeptide with homopropargylglycine (HPG); the substitution was found to replace 93% of the 41 methionines in the protein sequence as well as broaden and increase the thermoresponsive transition. A series of saccharides were conjugated to the recombinant protein backbones through copper(I)-catalyzed alkyne-azide cycloaddition to determine reactivity trends, with 83-100% glycosylation of HPGs. Only an acetyl-protected sialyllactose moiety showed a lower level of 42% HPG glycosylation that is attributed to steric hindrance. The recombinant glycoproteins reproduced the key biofunctional properties of their natural counterparts such as viral inhibition and lectin binding.
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Affiliation(s)
- Brian M Seifried
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Wenjing Qi
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai 200000, China
| | - Yun Jung Yang
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Danielle J Mai
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Wendy B Puryear
- Department of Infectious Disease and Global Health, Cummings School of Veterinary Medicine, Tufts University, North Grafton, Massachusetts 01536, United States
| | - Jonathan A Runstadler
- Department of Infectious Disease and Global Health, Cummings School of Veterinary Medicine, Tufts University, North Grafton, Massachusetts 01536, United States
| | - Guosong Chen
- The State Key Laboratory of Molecular Engineering of Polymers and Department of Macromolecular Science, Fudan University, Shanghai 200000, China
| | - Bradley D Olsen
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.,Department of Macromolecular Science, Fudan University, Shanghai 200000, China
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Gallego I, Rioboo A, Reina JJ, Díaz B, Canales Á, Cañada FJ, Guerra‐Varela J, Sánchez L, Montenegro J. Glycosylated Cell‐Penetrating Peptides (GCPPs). Chembiochem 2019; 20:1400-1409. [DOI: 10.1002/cbic.201800720] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Revised: 01/22/2019] [Indexed: 12/14/2022]
Affiliation(s)
- Iván Gallego
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela Campus Vida 15782 Santiago de Compostela Spain
| | - Alicia Rioboo
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela Campus Vida 15782 Santiago de Compostela Spain
| | - José J. Reina
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela Campus Vida 15782 Santiago de Compostela Spain
| | - Bernardo Díaz
- Centro de Investigaciones Biológicas (CIB) del CSIC C/Ramiro de Maetzu 9, CP 28040 Madrid Spain
- Departamento de Biología Estructural y QuímicaFac. Ciencias Químicas Univ. Complutense de Madrid Avd/ Complutense s/n, CP Madrid Spain
| | - Ángeles Canales
- Departamento de Biología Estructural y QuímicaFac. Ciencias Químicas Univ. Complutense de Madrid Avd/ Complutense s/n, CP Madrid Spain
| | - F. Javier Cañada
- Centro de Investigaciones Biológicas (CIB) del CSIC C/Ramiro de Maetzu 9, CP 28040 Madrid Spain
| | - Jorge Guerra‐Varela
- Departamento de Zooloxía, Xenética e Antropoloxía FísicaFacultade de Veterinaria Universidade de Santiago de Compostela 27002 Lugo Spain
| | - Laura Sánchez
- Departamento de Zooloxía, Xenética e Antropoloxía FísicaFacultade de Veterinaria Universidade de Santiago de Compostela 27002 Lugo Spain
| | - Javier Montenegro
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela Campus Vida 15782 Santiago de Compostela Spain
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Salerno G, Scarano S, Mamusa M, Consumi M, Giuntini S, Macagnano A, Nativi S, Fragai M, Minunni M, Berti D, Magnani A, Nativi C, Richichi B. A small heterobifunctional ligand provides stable and water dispersible core-shell CdSe/ZnS quantum dots (QDs). NANOSCALE 2018; 10:19720-19732. [PMID: 30256371 DOI: 10.1039/c8nr05566a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
We describe a simple method to prepare water dispersible core-shell CdSe/ZnS quantum dots (QDs) 1 by capping QDs with a new thiol-containing heterobifunctional dicarboxylic ligand 4 (DHLA-EDADA). This ligand, obtained on a gram scale through a few synthetic steps, provides a compact layer on the QDs, whose hydrodynamic size in H2O is 15 nm ± 3 nm. The colloidal stability is dramatically enhanced with respect to the well-known (±) α-lipoic acid (DHLA). The ligand affinity towards QDs and the water dispersibility of nanocrystals 1 are addressed by the dithiol groups of DHLA, which chelate the zinc of the shell, and by the dicarboxylic groups of the ethylenediamine-N,N-diacetic acid (EDADA) residue, respectively. The effects of pH, buffer solutions, and biological medium on the stability of QDs 1 were assessed by monitoring the photoluminescence (PL) and hydrodynamic size over time. Highly fluorescent QD dispersions, stable over extended periods of time and over broad pH ranges and buffer types, were obtained. Furthermore, we show that the DHLA-EDADA ligand 4 also endows QDs with functional groups suitable for further conjugation and for metal ion detection. As a case study to illustrate the potential of our approach, we report the preparation and characterization of a highly luminescent orange light emitting polymer-QD 1 composite film.
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Affiliation(s)
- Gianluca Salerno
- Department of Chemistry 'Ugo Schiff', University of Florence, Via della Lastruccia 13, 50019 Sesto F.no, FI, Italy.
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Schymura S, Fricke T, Hildebrand H, Franke K. Aufklärung der Rolle von CeO 2
-Nanopartikel-Auflösung bei der Aufnahme in die Pflanze mithilfe intelligenter Radiomarkierung. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201702421] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Stefan Schymura
- Institut für Ressourcenökologie; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Straße 15 04318 Leipzig Deutschland
| | - Thomas Fricke
- Vita34 AG; Geschäftsbereich BioPlanta; Deutscher Platz 5A 04103 Leipzig Deutschland
- Universität Bonn; Institut für Nutzpflanzenwissenschaften und Ressourcenschutz; Bereich Pflanzenernährung; Karlrobert-Kreiten-Straße 13 53115 Bonn Deutschland
| | - Heike Hildebrand
- Institut für Ressourcenökologie; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Straße 15 04318 Leipzig Deutschland
| | - Karsten Franke
- Institut für Ressourcenökologie; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Straße 15 04318 Leipzig Deutschland
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Schymura S, Fricke T, Hildebrand H, Franke K. Elucidating the Role of Dissolution in CeO2
Nanoparticle Plant Uptake by Smart Radiolabeling. Angew Chem Int Ed Engl 2017; 56:7411-7414. [DOI: 10.1002/anie.201702421] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2017] [Revised: 04/06/2017] [Indexed: 12/19/2022]
Affiliation(s)
- Stefan Schymura
- Institute of Resource Ecology; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Strasse 15 04318 Leipzig Germany
| | - Thomas Fricke
- Vita34 AG; Business Unit BioPlanta; Deutscher Platz 5A 04103 Leipzig Germany
- University of Bonn; Institute of Crop Science and Resource Conservation; Division Plant Nutrition; Karlrobert-Kreiten-Strasse 13 53115 Bonn Germany
| | - Heike Hildebrand
- Institute of Resource Ecology; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Strasse 15 04318 Leipzig Germany
| | - Karsten Franke
- Institute of Resource Ecology; Helmholtz-Zentrum Dresden-Rossendorf; Permoser Strasse 15 04318 Leipzig Germany
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Synthesis, properties and biomedical applications of carbon-based quantum dots: An updated review. Biomed Pharmacother 2017; 87:209-222. [PMID: 28061404 DOI: 10.1016/j.biopha.2016.12.108] [Citation(s) in RCA: 224] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2016] [Revised: 12/24/2016] [Accepted: 12/26/2016] [Indexed: 11/20/2022] Open
Abstract
Carbon-based quantum dots (CQDs) are a newly developed class of carbon nano-materials that have attracted much interest and attention as promising competitors to already available semiconductor quantum dots owing to their un-comparable and unique properties. In addition, controllability of CQDs unique physiochemical properties is as a result of their surface passivation and functionalization. This is an update article (between 2013 and 2016) on the recent progress, characteristics and synthesis methods of CQDs and different advantages in varieties of applications.
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Guo Y, Sakonsinsiri C, Nehlmeier I, Fascione MA, Zhang H, Wang W, Pöhlmann S, Turnbull WB, Zhou D. Compact, Polyvalent Mannose Quantum Dots as Sensitive, Ratiometric FRET Probes for Multivalent Protein-Ligand Interactions. Angew Chem Int Ed Engl 2016; 55:4738-42. [PMID: 26990806 PMCID: PMC4979658 DOI: 10.1002/anie.201600593] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2016] [Indexed: 12/22/2022]
Abstract
A highly efficient cap-exchange approach for preparing compact, dense polyvalent mannose-capped quantum dots (QDs) has been developed. The resulting QDs have been successfully used to probe multivalent interactions of HIV/Ebola receptors DC-SIGN and DC-SIGNR (collectively termed as DC-SIGN/R) using a sensitive, ratiometric Förster resonance energy transfer (FRET) assay. The QD probes specifically bind DC-SIGN, but not its closely related receptor DC-SIGNR, which is further confirmed by its specific blocking of DC-SIGN engagement with the Ebola virus glycoprotein. Tuning the QD surface mannose valency reveals that DC-SIGN binds more efficiently to densely packed mannosides. A FRET-based thermodynamic study reveals that the binding is enthalpy-driven. This work establishes QD FRET as a rapid, sensitive technique for probing structure and thermodynamics of multivalent protein-ligand interactions.
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Affiliation(s)
- Yuan Guo
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
| | - Chadamas Sakonsinsiri
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Inga Nehlmeier
- Infection Biology Unit, German Primate Center, Kellnerweg 4, 37077, Göttingen, Germany
| | - Martin A Fascione
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK
| | - Haiyan Zhang
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Weili Wang
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Stefan Pöhlmann
- Infection Biology Unit, German Primate Center, Kellnerweg 4, 37077, Göttingen, Germany
| | - W Bruce Turnbull
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Dejian Zhou
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
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Guo Y, Sakonsinsiri C, Nehlmeier I, Fascione MA, Zhang H, Wang W, Pöhlmann S, Turnbull WB, Zhou D. Compact, Polyvalent Mannose Quantum Dots as Sensitive, Ratiometric FRET Probes for Multivalent Protein-Ligand Interactions. ACTA ACUST UNITED AC 2016; 128:4816-4820. [PMID: 27563159 PMCID: PMC4979676 DOI: 10.1002/ange.201600593] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2016] [Indexed: 12/24/2022]
Abstract
A highly efficient cap-exchange approach for preparing compact, dense polyvalent mannose-capped quantum dots (QDs) has been developed. The resulting QDs have been successfully used to probe multivalent interactions of HIV/Ebola receptors DC-SIGN and DC-SIGNR (collectively termed as DC-SIGN/R) using a sensitive, ratiometric Förster resonance energy transfer (FRET) assay. The QD probes specifically bind DC-SIGN, but not its closely related receptor DC-SIGNR, which is further confirmed by its specific blocking of DC-SIGN engagement with the Ebola virus glycoprotein. Tuning the QD surface mannose valency reveals that DC-SIGN binds more efficiently to densely packed mannosides. A FRET-based thermodynamic study reveals that the binding is enthalpy-driven. This work establishes QD FRET as a rapid, sensitive technique for probing structure and thermodynamics of multivalent protein-ligand interactions.
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Affiliation(s)
- Yuan Guo
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
| | - Chadamas Sakonsinsiri
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
| | - Inga Nehlmeier
- Infection Biology Unit German Primate Center Kellnerweg 4 37077 Göttingen Germany
| | - Martin A Fascione
- Department of Chemistry University of York Heslington York YO10 5DD UK
| | - Haiyan Zhang
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
| | - Weili Wang
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
| | - Stefan Pöhlmann
- Infection Biology Unit German Primate Center Kellnerweg 4 37077 Göttingen Germany
| | - W Bruce Turnbull
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
| | - Dejian Zhou
- School of Chemistry and Astbury Centre for Structural Molecular Biology University of Leeds Leeds LS2 9JT UK
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Akkus Sut P, Tunc CU, Culha M. Lactose-modified DNA tile nanostructures as drug carriers. J Drug Target 2016; 24:709-19. [PMID: 26805650 DOI: 10.3109/1061186x.2016.1144059] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
BACKGROUND DNA hybridization allows the preparation of nanoscale DNA structures with desired shape and size. DNA structures using simple base pairing can be used for the delivery of drug molecules into the cells. Since DNA carries multiple negative charges, their cellular uptake efficiency is low. Thus, the modification of the DNA structures with molecules that may enhance the cellular internalization may be an option. OBJECTIVE The objective of this study is to construct DNA-based nanocarrier system and to investigate the cellular uptake of DNA tile with/without lactose modification. METHODS Doxorubicin was intercalated to DNA tile and cellular uptake of drug-loaded DNA-based carrier with/without lactose modification was investigated in vitro. HeLa, BT-474, and MDA-MB-231 cancer cells were used for cellular uptake studies and cytotoxicity assays. Using fluorescence spectroscopy, flow cytometry, and confocal microscopy, cellular uptake behavior of DNA tile was investigated. The cytotoxicity of DNA tile structures was determined with WST-1 assay. RESULTS The results show that modification with lactose effectively increases the intracellular uptake of doxorubicin loaded DNA tile structure by cancer cells compared with the unmodified DNA tile. CONCLUSION The findings of this study suggest that DNA-based nanostructures modified with carbohydrates can be used as suitable multifunctional nanocarriers with simple chemical modifications.
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Affiliation(s)
- Pinar Akkus Sut
- a Department of Genetics and Bioengineering, Faculty of Engineering and Architecture , Yeditepe University , Istanbul , Turkey
| | - Cansu Umran Tunc
- a Department of Genetics and Bioengineering, Faculty of Engineering and Architecture , Yeditepe University , Istanbul , Turkey
| | - Mustafa Culha
- a Department of Genetics and Bioengineering, Faculty of Engineering and Architecture , Yeditepe University , Istanbul , Turkey
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