1
|
Peluso P, Chankvetadze B. Recognition in the Domain of Molecular Chirality: From Noncovalent Interactions to Separation of Enantiomers. Chem Rev 2022; 122:13235-13400. [PMID: 35917234 DOI: 10.1021/acs.chemrev.1c00846] [Citation(s) in RCA: 57] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
It is not a coincidence that both chirality and noncovalent interactions are ubiquitous in nature and synthetic molecular systems. Noncovalent interactivity between chiral molecules underlies enantioselective recognition as a fundamental phenomenon regulating life and human activities. Thus, noncovalent interactions represent the narrative thread of a fascinating story which goes across several disciplines of medical, chemical, physical, biological, and other natural sciences. This review has been conceived with the awareness that a modern attitude toward molecular chirality and its consequences needs to be founded on multidisciplinary approaches to disclose the molecular basis of essential enantioselective phenomena in the domain of chemical, physical, and life sciences. With the primary aim of discussing this topic in an integrated way, a comprehensive pool of rational and systematic multidisciplinary information is provided, which concerns the fundamentals of chirality, a description of noncovalent interactions, and their implications in enantioselective processes occurring in different contexts. A specific focus is devoted to enantioselection in chromatography and electromigration techniques because of their unique feature as "multistep" processes. A second motivation for writing this review is to make a clear statement about the state of the art, the tools we have at our disposal, and what is still missing to fully understand the mechanisms underlying enantioselective recognition.
Collapse
Affiliation(s)
- Paola Peluso
- Istituto di Chimica Biomolecolare ICB, CNR, Sede secondaria di Sassari, Traversa La Crucca 3, Regione Baldinca, Li Punti, I-07100 Sassari, Italy
| | - Bezhan Chankvetadze
- Institute of Physical and Analytical Chemistry, School of Exact and Natural Sciences, Tbilisi State University, Chavchavadze Avenue 3, 0179 Tbilisi, Georgia
| |
Collapse
|
2
|
Jian J, Hammink R, Tinnemans P, Bickelhaupt FM, McKenzie CJ, Poater J, Mecinović J. Probing Noncovalent Interactions in [3,3]Metaparacyclophanes. J Org Chem 2022; 87:6087-6096. [PMID: 35471006 DOI: 10.1021/acs.joc.2c00350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Arene-arene interactions are fundamentally important in molecular recognition. To precisely probe arene-arene interactions in cyclophanes, we designed and synthesized (2,6-phenol)paracyclophanes and (2,6-aniline)paracyclophanes that possess two aromatic rings in close proximity. Fine-tuning the aromatic character of one aromatic ring by fluorine substituents enables investigations on the intramolecular interactions between the electron-rich phenol and aniline with tetra-H- and tetra-F-substituted benzene. pKa measurements revealed that the tetra-F-template increases the acidity of the phenol (ΔpKa = 0.55). X-ray crystallography and computational analyses demonstrated that all [3,3]metaparacyclophanes adopt cofacial parallel conformations, implying the presence of π-π stacking interactions. Advanced quantum chemical analyses furthermore revealed that both electrostatic interactions and orbital interactions provide the key contribution to the structure and stability of [3,3]metaparacyclophanes.
Collapse
Affiliation(s)
- Jie Jian
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Roel Hammink
- Division of Immunotherapy, Oncode Institute, Radboud University Medical Center, Nijmegen, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands.,Department of Tumor Immunology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Paul Tinnemans
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - F Matthias Bickelhaupt
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.,Department of Theoretical Chemistry, Amsterdam Center for Multiscale Modeling, Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands
| | - Christine J McKenzie
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| | - Jordi Poater
- ICREA, Passeig Lluís Companys 23, 08010 Barcelona, Spain.,Departament de Química Inorgànica i Orgànica & IQTCUB, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Jasmin Mecinović
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
| |
Collapse
|
3
|
Yamada M, Narita H, Maeda Y. A Fullerene‐Based Molecular Torsion Balance for Investigating Noncovalent Interactions at the C
60
Surface. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202005888] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Michio Yamada
- Department of Chemistry Tokyo Gakugei University Nukuikitamachi 4-1-1 Koganei Tokyo 184-8501 Japan
| | - Haruna Narita
- Department of Chemistry Tokyo Gakugei University Nukuikitamachi 4-1-1 Koganei Tokyo 184-8501 Japan
| | - Yutaka Maeda
- Department of Chemistry Tokyo Gakugei University Nukuikitamachi 4-1-1 Koganei Tokyo 184-8501 Japan
| |
Collapse
|
4
|
Yamada M, Narita H, Maeda Y. A Fullerene-Based Molecular Torsion Balance for Investigating Noncovalent Interactions at the C 60 Surface. Angew Chem Int Ed Engl 2020; 59:16133-16140. [PMID: 32458522 DOI: 10.1002/anie.202005888] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Indexed: 12/12/2022]
Abstract
To investigate the nature and strength of noncovalent interactions at the fullerene surface, molecular torsion balances consisting of C60 and organic moieties connected through a biphenyl linkage were synthesized. NMR and computational studies show that the unimolecular system remains in equilibrium between well-defined folded and unfolded conformers owing to restricted rotation around the biphenyl C-C bond. The energy differences between the two conformers depend on the substituents and is ascribed to differences in the intramolecular noncovalent interactions between the organic moieties and the fullerene surface. Fullerenes favor interacting with the π-faces of benzenes bearing electron-donating substituents. The correlation between the folding free energies and corresponding Hammett constants of the substituents in the arene-containing torsion balances reflects the contributions of the electrostatic interactions and dispersion force to face-to-face arene-fullerene interactions.
Collapse
Affiliation(s)
- Michio Yamada
- Department of Chemistry, Tokyo Gakugei University, Nukuikitamachi 4-1-1, Koganei, Tokyo, 184-8501, Japan
| | - Haruna Narita
- Department of Chemistry, Tokyo Gakugei University, Nukuikitamachi 4-1-1, Koganei, Tokyo, 184-8501, Japan
| | - Yutaka Maeda
- Department of Chemistry, Tokyo Gakugei University, Nukuikitamachi 4-1-1, Koganei, Tokyo, 184-8501, Japan
| |
Collapse
|
5
|
Partsevska SV, Sirenko VY, Terebilenko KV, Malinkin SO, Gural’skiy IA. Crystal structure of catena-poly[[[(2-eth-oxy-pyrazine-κ N)copper(I)]-di-μ 2-cyanido] [copper(I)-μ 2-cyanido]]. Acta Crystallogr E Crystallogr Commun 2019; 75:1797-1800. [PMID: 31709111 PMCID: PMC6829724 DOI: 10.1107/s205698901901452x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Accepted: 10/24/2019] [Indexed: 11/29/2022]
Abstract
In the asymmetric unit of the title coordination compound, {[Cu(CN)(C4H3OC2H5N2)][Cu(CN)]} n , there are two Cu atoms with different coordination environments. One CuI ion is coordinated in a triangular coordination geometry by the N atom of the 2-eth-oxy-pyrazine mol-ecule and by two bridging cyanide ligands, equally disordered over two sites exchanging C and N atoms, thus forming polymeric chains parallel to the c axis. The other Cu atom is connected to two bridging cyanide groups disordered over two sites with an occupancy of 0.5 for each C and N atom, and forming an almost linear polymeric chain parallel to the b axis. In the crystal, the two types of chain, which are orthogonal to each other, are connected by cuprophilic Cu⋯Cu inter-actions [2.7958 (13) Å], forming two-dimensional metal-organic coordination layers parallel to the bc plane. The coordination framework is further stabilized by weak long-range (electrostatic type) C-H⋯π inter-actions between cyano groups and 2-eth-oxy-pyrazine rings.
Collapse
Affiliation(s)
- Sofiia V. Partsevska
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska St. 64, Kyiv 01601, Ukraine
| | - Valerii Y. Sirenko
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska St. 64, Kyiv 01601, Ukraine
| | - Kateryna V. Terebilenko
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska St. 64, Kyiv 01601, Ukraine
| | - Sergey O. Malinkin
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska St. 64, Kyiv 01601, Ukraine
| | - Il’ya A. Gural’skiy
- Department of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska St. 64, Kyiv 01601, Ukraine
| |
Collapse
|
6
|
Aliev AE, Motherwell WB. Some Recent Advances in the Design and Use of Molecular Balances for the Experimental Quantification of Intramolecular Noncovalent Interactions of π Systems. Chemistry 2019; 25:10516-10530. [DOI: 10.1002/chem.201900854] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2019] [Revised: 05/09/2019] [Indexed: 02/03/2023]
Affiliation(s)
- Abil E. Aliev
- Department of ChemistryUniversity College London 20 Gordon Street London WC1H 0AJ UK
| | - William B. Motherwell
- Department of ChemistryUniversity College London 20 Gordon Street London WC1H 0AJ UK
| |
Collapse
|
7
|
Motherwell WB, Moreno RB, Pavlakos I, Arendorf JRT, Arif T, Tizzard GJ, Coles SJ, Aliev AE. Noncovalent Interactions of π Systems with Sulfur: The Atomic Chameleon of Molecular Recognition. Angew Chem Int Ed Engl 2017; 57:1193-1198. [DOI: 10.1002/anie.201708485] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 11/16/2017] [Indexed: 12/24/2022]
Affiliation(s)
- William B. Motherwell
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Rafael B. Moreno
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Ilias Pavlakos
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | | | - Tanzeel Arif
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Graham J. Tizzard
- School of Chemistry; University of Southampton; University Road Southampton SO17 1BJ UK
| | - Simon J. Coles
- School of Chemistry; University of Southampton; University Road Southampton SO17 1BJ UK
| | - Abil E. Aliev
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| |
Collapse
|
8
|
Motherwell WB, Moreno RB, Pavlakos I, Arendorf JRT, Arif T, Tizzard GJ, Coles SJ, Aliev AE. Noncovalent Interactions of π Systems with Sulfur: The Atomic Chameleon of Molecular Recognition. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201708485] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- William B. Motherwell
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Rafael B. Moreno
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Ilias Pavlakos
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | | | - Tanzeel Arif
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| | - Graham J. Tizzard
- School of Chemistry; University of Southampton; University Road Southampton SO17 1BJ UK
| | - Simon J. Coles
- School of Chemistry; University of Southampton; University Road Southampton SO17 1BJ UK
| | - Abil E. Aliev
- Department of Chemistry; University College London; 20 Gordon Street London WC1H 0AJ UK
| |
Collapse
|
9
|
Dominelli‐Whiteley N, Brown JJ, Muchowska KB, Mati IK, Adam C, Hubbard TA, Elmi A, Brown AJ, Bell IAW, Cockroft SL. Strong Short-Range Cooperativity in Hydrogen-Bond Chains. Angew Chem Int Ed Engl 2017; 56:7658-7662. [PMID: 28493462 PMCID: PMC5488241 DOI: 10.1002/anie.201703757] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Revised: 05/09/2017] [Indexed: 01/23/2023]
Abstract
Chains of hydrogen bonds such as those found in water and proteins are often presumed to be more stable than the sum of the individual H bonds. However, the energetics of cooperativity are complicated by solvent effects and the dynamics of intermolecular interactions, meaning that information on cooperativity typically is derived from theory or indirect structural data. Herein, we present direct measurements of energetic cooperativity in an experimental system in which the geometry and the number of H bonds in a chain were systematically controlled. Strikingly, we found that adding a second H-bond donor to form a chain can almost double the strength of the terminal H bond, while further extensions have little effect. The experimental observations add weight to computations which have suggested that strong, but short-range cooperative effects may occur in H-bond chains.
Collapse
Affiliation(s)
- Nicholas Dominelli‐Whiteley
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - James J. Brown
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Kamila B. Muchowska
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Ioulia K. Mati
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Catherine Adam
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Thomas A. Hubbard
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Alex Elmi
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | | | - Ian A. W. Bell
- Afton Chemical LimitedLondon RoadBracknellBerkshireRG12 2UWUK
| | - Scott L. Cockroft
- EaStCHEM School of ChemistryUniversity of Edinburgh, Joseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| |
Collapse
|
10
|
Dominelli-Whiteley N, Brown JJ, Muchowska KB, Mati IK, Adam C, Hubbard TA, Elmi A, Brown AJ, Bell IAW, Cockroft SL. Strong Short-Range Cooperativity in Hydrogen-Bond Chains. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201703757] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Nicholas Dominelli-Whiteley
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - James J. Brown
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - Kamila B. Muchowska
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - Ioulia K. Mati
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - Catherine Adam
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - Thomas A. Hubbard
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | - Alex Elmi
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| | | | - Ian A. W. Bell
- Afton Chemical Limited; London Road Bracknell Berkshire RG12 2UW UK
| | - Scott L. Cockroft
- EaStCHEM School of Chemistry; University of Edinburgh, Joseph Black Building; David Brewster Road Edinburgh EH9 3FJ UK
| |
Collapse
|
11
|
Sun H, Horatscheck A, Martos V, Bartetzko M, Uhrig U, Lentz D, Schmieder P, Nazaré M. Direct Experimental Evidence for Halogen-Aryl π Interactions in Solution from Molecular Torsion Balances. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201700520] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Han Sun
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - André Horatscheck
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
- Drug Discovery and Development Centre (H3D); Department of Chemistry; University of Cape Town; Rondebosch 7701 South Africa
| | - Vera Martos
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Max Bartetzko
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
- Max-Planck-Institut für Kolloid- und Grenzflächenforschung; Am Mühlenberg 1 14476 Potsdam Germany
| | - Ulrike Uhrig
- European Molecular Biology Laboratory (EMBL); Chemical Biology Core Facility; Meyerhofstrasse 1 69117 Heidelberg Germany
| | - Dieter Lentz
- Institut für Chemie und Biochemie; Anorganische Chemie; Freie Universität Berlin; Fabeckstrasse 34-36 14195 Berlin Germany
| | - Peter Schmieder
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Marc Nazaré
- Departments of Chemical Biology and Structural Biology; Leibniz-Institut fϋr Molekulare Pharmakologie (FMP); Campus Berlin-Buch; Robert-Roessle-Strasse 10 13125 Berlin Germany
| |
Collapse
|
12
|
Sun H, Horatscheck A, Martos V, Bartetzko M, Uhrig U, Lentz D, Schmieder P, Nazaré M. Direct Experimental Evidence for Halogen-Aryl π Interactions in Solution from Molecular Torsion Balances. Angew Chem Int Ed Engl 2017; 56:6454-6458. [PMID: 28452102 DOI: 10.1002/anie.201700520] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2017] [Indexed: 12/24/2022]
Abstract
We dissected halogen-aryl π interactions experimentally using a bicyclic N-arylimide based molecular torsion balances system, which is based on the influence of the non-bonded interaction on the equilibria between folded and unfolded states. Through comparison of balances modulated by higher halogens with fluorine balances, we determined the magnitude of the halogen-aryl π interactions in our unimolecular systems to be larger than -5.0 kJ mol-1 , which is comparable with the magnitude estimated in the biomolecular systems. Our study provides direct experimental evidence of halogen-aryl π interactions in solution, which until now have only been revealed in the solid state and evaluated theoretically by quantum-mechanical calculations.
Collapse
Affiliation(s)
- Han Sun
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany
| | - André Horatscheck
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany.,Drug Discovery and Development Centre (H3D), Department of Chemistry, University of Cape Town, Rondebosch, 7701, South Africa
| | - Vera Martos
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany
| | - Max Bartetzko
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany.,Max-Planck-Institut für Kolloid- und Grenzflächenforschung, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Ulrike Uhrig
- European Molecular Biology Laboratory (EMBL), Chemical Biology Core Facility, Meyerhofstrasse 1, 69117, Heidelberg, Germany
| | - Dieter Lentz
- Institut für Chemie und Biochemie, Anorganische Chemie, Freie Universität Berlin, Fabeckstrasse 34-36, 14195, Berlin, Germany
| | - Peter Schmieder
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany
| | - Marc Nazaré
- Departments of Chemical Biology and Structural Biology, Leibniz-Institut fϋr Molekulare Pharmakologie (FMP), Campus Berlin-Buch, Robert-Roessle-Strasse 10, 13125, Berlin, Germany
| |
Collapse
|
13
|
Assessment of the Presence and Strength of H-Bonds by Means of Corrected NMR. Molecules 2016; 21:molecules21111426. [PMID: 27801801 PMCID: PMC6274571 DOI: 10.3390/molecules21111426] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Revised: 10/19/2016] [Accepted: 10/21/2016] [Indexed: 11/30/2022] Open
Abstract
The downfield shift of the NMR signal of the bridging proton in a H-bond (HB) is composed of two elements. The formation of the HB causes charge transfer and polarization that lead to a deshielding. A second factor is the mere presence of the proton-accepting group, whose electron density and response to an external magnetic field induce effects at the position of the bridging proton, exclusive of any H-bonding phenomenon. This second positional shielding must be subtracted from the full observed shift in order to assess the deshielding of the proton caused purely by HB formation. This concept is applied to a number of H-bonded systems, both intramolecular and intermolecular. When the positional shielding is removed, the remaining chemical shift is in much better coincidence with other measures of HB strength.
Collapse
|
14
|
Preise 2015 der Société Chimique de France. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201509907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
15
|
Société Chimique de France Prizes 2015. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/anie.201509907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
16
|
Yamada S, Yamamoto N, Takamori E. A Molecular Seesaw Balance: Evaluation of Solvent and Counteranion Effects on Pyridinium−π Interactions. Org Lett 2015; 17:4862-5. [DOI: 10.1021/acs.orglett.5b02420] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Shinji Yamada
- Department of Chemistry,
Faculty of Science, Ochanomizu University, 2-1-1 Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Natsuo Yamamoto
- Department of Chemistry,
Faculty of Science, Ochanomizu University, 2-1-1 Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Eri Takamori
- Department of Chemistry,
Faculty of Science, Ochanomizu University, 2-1-1 Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| |
Collapse
|
17
|
Yang L, Adam C, Cockroft SL. Quantifying Solvophobic Effects in Nonpolar Cohesive Interactions. J Am Chem Soc 2015; 137:10084-7. [DOI: 10.1021/jacs.5b05736] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lixu Yang
- EaStCHEM School of Chemistry, University of Edinburgh, Joseph Black
Building, David Brewster Road, Edinburgh EH9 3FJ, U.K
| | - Catherine Adam
- EaStCHEM School of Chemistry, University of Edinburgh, Joseph Black
Building, David Brewster Road, Edinburgh EH9 3FJ, U.K
| | - Scott L. Cockroft
- EaStCHEM School of Chemistry, University of Edinburgh, Joseph Black
Building, David Brewster Road, Edinburgh EH9 3FJ, U.K
| |
Collapse
|
18
|
Pavlakos I, Arif T, Aliev AE, Motherwell WB, Tizzard GJ, Coles SJ. Noncovalent Lone Pair⋅⋅⋅(No-π!)-Heteroarene Interactions: The Janus-Faced Hydroxy Group. Angew Chem Int Ed Engl 2015; 54:8169-74. [DOI: 10.1002/anie.201502103] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2015] [Indexed: 11/10/2022]
|
19
|
Pavlakos I, Arif T, Aliev AE, Motherwell WB, Tizzard GJ, Coles SJ. Noncovalent Lone Pair⋅⋅⋅(No-π!)-Heteroarene Interactions: The Janus-Faced Hydroxy Group. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201502103] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
|