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Li RN, Chen SL. Mechanism for the Halogenation and Azidation of Lysine Catalyzed by Non-heme Iron BesD Enzyme. Chem Asian J 2022; 17:e202200438. [PMID: 35763338 DOI: 10.1002/asia.202200438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 06/23/2022] [Indexed: 11/09/2022]
Abstract
Selective halogenation is important in synthetic chemistry. BesD, a new member of the non-heme Fe(II)/α-ketoglutarate (αKG)-dependent halogenase family, can activate the sp3 C-H bond and halogenate lysine, in particular without a carrier protein. Using the density functional calculations, a chlorination mechanism in BesD has been proposed, mainly including the formation of Cl-Fe(IV)=O through the αKG decarboxylation, the isomerization of Cl-Fe(IV)=O, the substrate hydrogen abstraction by Fe(IV)=O, and the rebound of chloro to the substrate carbon radical. The hydrogen abstraction is rate-limiting. The isomerization of Cl-Fe(IV)=O is essential for the hydrogen abstraction and the chiral selectivity. The BesD-catalyzed bromination and azidation of lysine adopt the same mechanism as the chlorination. The hardly-changed overall barriers indicate that the introduced ligands (X) do not affect the reaction rate significantly, implying that the X-introduced reactions catalyzed by BesD may be extended to other X anions.
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Affiliation(s)
- Rui-Ning Li
- Beijing Institute of Technology, School of Chemistry and Chemical Engineering, 100081, Beijing, CHINA
| | - Shi-Lu Chen
- Beijing Institute of Technology, School of Chemistry and Chemical Engineering, 5th, ZhongGuanCun South Street, 100081, Beijing, CHINA
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2
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Bleher K, Comba P, Gross JH, Josephy T. ESI and tandem MS for mechanistic studies with high-valent transition metal species. Dalton Trans 2022; 51:8625-8639. [DOI: 10.1039/d2dt00809b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The analysis of high-valent metal species has been in the focus of research for over 20 years. Mass spectrometry (MS) represents a technique routinely used for their characterization, in particular...
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Endrődi B, Diaz-Morales O, Mattinen U, Cuartero M, Padinjarethil AK, Simic N, Wildlock M, Crespo GA, Cornell A. Selective electrochemical hydrogen evolution on cerium oxide protected catalyst surfaces. Electrochim Acta 2020. [DOI: 10.1016/j.electacta.2020.136022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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4
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Mubarak MQE, Visser SP. Computational Study on the Catalytic Reaction Mechanism of Heme Haloperoxidase Enzymes. Isr J Chem 2019. [DOI: 10.1002/ijch.201900099] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- M. Qadri E. Mubarak
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science The University of Manchester 131 Princess Street Manchester M1 7DN United Kingdom
| | - Sam P. Visser
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science The University of Manchester 131 Princess Street Manchester M1 7DN United Kingdom
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Rasheed W, Draksharapu A, Banerjee S, Young VG, Fan R, Guo Y, Ozerov M, Nehrkorn J, Krzystek J, Telser J, Que L. Crystallographic Evidence for a Sterically Induced Ferryl Tilt in a Non‐Heme Oxoiron(IV) Complex that Makes it a Better Oxidant. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201804836] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Waqas Rasheed
- Department of Chemistry and Center for Metals in Biocatalysis University of Minnesota Minneapolis MN 55455 USA
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis University of Minnesota Minneapolis MN 55455 USA
| | - Saikat Banerjee
- Department of Chemistry and Center for Metals in Biocatalysis University of Minnesota Minneapolis MN 55455 USA
| | - Victor G. Young
- Department of Chemistry and Center for Metals in Biocatalysis University of Minnesota Minneapolis MN 55455 USA
| | - Ruixi Fan
- Department of Chemistry Carnegie Mellon University Pittsburgh PA 15213 USA
| | - Yisong Guo
- Department of Chemistry Carnegie Mellon University Pittsburgh PA 15213 USA
| | - M. Ozerov
- National High Magnetic Field Laboratory (NHMFL) Florida State University Tallahassee FL 32310 USA
| | - Joscha Nehrkorn
- National High Magnetic Field Laboratory (NHMFL) Florida State University Tallahassee FL 32310 USA
| | - J. Krzystek
- National High Magnetic Field Laboratory (NHMFL) Florida State University Tallahassee FL 32310 USA
| | - Joshua Telser
- Department of Biological Chemical and Physical Sciences Roosevelt University Chicago IL 60605 USA
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis University of Minnesota Minneapolis MN 55455 USA
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Rasheed W, Draksharapu A, Banerjee S, Young VG, Fan R, Guo Y, Ozerov M, Nehrkorn J, Krzystek J, Telser J, Que L. Crystallographic Evidence for a Sterically Induced Ferryl Tilt in a Non-Heme Oxoiron(IV) Complex that Makes it a Better Oxidant. Angew Chem Int Ed Engl 2018; 57:9387-9391. [PMID: 29882390 DOI: 10.1002/anie.201804836] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Indexed: 11/06/2022]
Abstract
Oxoiron(IV) units are often implicated as intermediates in the catalytic cycles of non-heme iron oxygenases and oxidases. The most reactive synthetic analogues of these intermediates are supported by tetradentate tripodal ligands with N-methylbenzimidazole or quinoline donors, but their instability precludes structural characterization. Herein we report crystal structures of two [FeIV (O)(L)]2+ complexes supported by pentadentate ligands incorporating these heterocycles, which show longer average Fe-N distances than the complex with only pyridine donors. These longer distances correlate linearly with log k2 ' values for O- and H-atom transfer rates, suggesting that weakening the ligand field increases the electrophilicity of the Fe=O center. The sterically bulkier quinoline donors are also found to tilt the Fe=O unit away from a linear N-Fe=O arrangement by 10°.
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Affiliation(s)
- Waqas Rasheed
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Saikat Banerjee
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Victor G Young
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Ruixi Fan
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Yisong Guo
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - M Ozerov
- National High Magnetic Field Laboratory (NHMFL), Florida State University, Tallahassee, FL, 32310, USA
| | - Joscha Nehrkorn
- National High Magnetic Field Laboratory (NHMFL), Florida State University, Tallahassee, FL, 32310, USA
| | - J Krzystek
- National High Magnetic Field Laboratory (NHMFL), Florida State University, Tallahassee, FL, 32310, USA
| | - Joshua Telser
- Department of Biological, Chemical and Physical Sciences, Roosevelt University, Chicago, IL, 60605, USA
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
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Affiliation(s)
- Paolo Pirovano
- School of Chemistry and CRANN/AMBER Nanoscience Institute; Trinity College Dublin; The University of Dublin; College Green 2 Dublin Ireland
| | - Aidan R. McDonald
- School of Chemistry and CRANN/AMBER Nanoscience Institute; Trinity College Dublin; The University of Dublin; College Green 2 Dublin Ireland
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Klein JEMN, Draksharapu A, Shokri A, Cramer CJ, Que L. On the Lewis Acidity of the Oxoiron(IV) Unit in a Tetramethylcyclam Complex. Chemistry 2017; 24:5373-5378. [PMID: 29205555 DOI: 10.1002/chem.201704977] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2017] [Indexed: 11/08/2022]
Abstract
The correlation between oxidation state and Lewis acidity is well established for hexaquairon complexes in the +II and +III oxidation state, in which the higher oxidation state leads to a lower pKa for the bound H2 O ligand. This article addresses the Lewis acidity of the oxoiron(IV) complex [FeIV (O)(TMC)(OH2 )]2+ (1-OH2 ; TMC=1,4,8,11-tetramethylcyclam) by determining the pKa of the H2 O ligand. We establish that 1-OH2 has a pKa of 6.9±0.5, a value that falls in between those found for [FeIII (OH2 )6 ]3+ and [FeII (OH2 )6 ]2+ . This intermediate value can be readily rationalized by the presence of the highly basic oxide ligand that mitigates the Lewis acidity of the iron(IV) center. Although the oxo ligand occupies only one position in 1-OH2 , anti to all four methyl groups that protrude from the same face of the nonplanar TMC ligand, its conjugate base 1-OH exists as a mixture of syn and anti tautomers, which are related by proton transfer between the oxo and the hydroxo ligands.
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Affiliation(s)
- Johannes E M N Klein
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. S.E., Minneapolis, Minnesota, 55455, USA.,Present Address: Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747, AG Groningen, The Netherlands
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. S.E., Minneapolis, Minnesota, 55455, USA
| | - Alireza Shokri
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. S.E., Minneapolis, Minnesota, 55455, USA
| | - Christopher J Cramer
- Department of Chemistry, Supercomputing Institute, and Chemical Theory Center, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota, 55455, USA
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. S.E., Minneapolis, Minnesota, 55455, USA
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Khan FST, Pandey AK, Rath SP. Remarkable Anion-Dependent Spin-State Switching in Diiron(III) μ-Hydroxo Bisporphyrins: What Role do Counterions Play? Chemistry 2016; 22:16124-16137. [PMID: 27682429 DOI: 10.1002/chem.201603163] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2016] [Indexed: 12/20/2022]
Abstract
Addition of 2,4,6-trinitrophenol (HTNP) to an ethene-bridged diiron(III) μ-oxo bisporphyrin (1) in CH2 Cl2 initially leads to the formation of diiron(III) μ-hydroxo bisporphyrin (2⋅TNP) with a phenolate counterion that, after further addition of HTNP or dissolution in a nonpolar solvent, converts to a diiron(III) complex with axial phenoxide coordination (3⋅(TNP)2 ). The progress of the reaction from μ-oxo to μ-hydroxo to axially ligated complex has been monitored in solution by using 1 H NMR spectroscopy because their signals appear in three different and distinct spectral regions. The X-ray structure of 2⋅TNP revealed that the nearly planar TNP counterion fits perfectly within the bisporphyrin cavity to form a strong hydrogen bond with the μ-hydroxo group, which thus stabilizes the two equivalent iron centers. In contrast, such counterions as I5 , I3 , BF4 , SbF6 , and PF6 are found to be tightly associated with one of the porphyrin rings and, therefore, stabilize two different spin states of iron in one molecule. A spectroscopic investigation of 2⋅TNP has revealed the presence of two equivalent iron centers with a high-spin state (S=5/2) in the solid state that converts to intermediate spin (S=3/2) in solution. An extensive computational study by using a range of DFT methods was performed on 2⋅TNP and 2+ , and clearly supports the experimentally observed spin flip triggered by hydrogen-bonding interactions. The counterion is shown to perturb the spin-state ordering through, for example, hydrogen-bonding interactions, switched positions between counterion and axial ligand, ion-pair interactions, and charge polarization. The present investigation thus provides a clear rationalization of the unusual counterion-specific spin states observed in the μ-hydroxo bisporphyrins that have so far remained the most outstanding issue.
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Affiliation(s)
| | - Anjani Kumar Pandey
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, 208016, India
| | - Sankar Prasad Rath
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, 208016, India.
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Sil D, Khan FST, Rath SP. Effect of Inter-Porphyrin Distance on Spin-State in Diiron(III) μ-Hydroxo Bisporphyrins. Chemistry 2016; 22:14585-97. [DOI: 10.1002/chem.201602018] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Indexed: 12/16/2022]
Affiliation(s)
- Debangsu Sil
- Department of Chemistry; Indian Institute of Technology Kanpur; Kanpur- 208016 India
| | | | - Sankar Prasad Rath
- Department of Chemistry; Indian Institute of Technology Kanpur; Kanpur- 208016 India
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de Sousa DP, Wegeberg C, Vad MS, Mørup S, Frandsen C, Donald WA, McKenzie CJ. Halogen-Bonding-Assisted Iodosylbenzene Activation by a Homogenous Iron Catalyst. Chemistry 2015; 22:3810-20. [DOI: 10.1002/chem.201503112] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2015] [Revised: 09/22/2015] [Indexed: 11/11/2022]
Affiliation(s)
- David P. de Sousa
- Department of Physics, Chemistry and Pharmacy; University of Southern; Campusvej 55 5230 Odense M Denmark
| | - Christina Wegeberg
- Department of Physics, Chemistry and Pharmacy; University of Southern; Campusvej 55 5230 Odense M Denmark
| | - Mads Sørensen Vad
- Department of Physics, Chemistry and Pharmacy; University of Southern; Campusvej 55 5230 Odense M Denmark
| | - Steen Mørup
- Department of Physics; Technical University of Denmark; 2800 >Kongens Lyngby Denmark
| | - Cathrine Frandsen
- Department of Physics; Technical University of Denmark; 2800 >Kongens Lyngby Denmark
| | - William A. Donald
- School of Chemistry; University of New South Wales; Sydney, NSW Australia
| | - Christine J. McKenzie
- Department of Physics, Chemistry and Pharmacy; University of Southern; Campusvej 55 5230 Odense M Denmark
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Wang B, Lee YM, Seo MS, Nam W. Mononuclear Nonheme Iron(III)-Iodosylarene and High-Valent Iron-Oxo Complexes in Olefin Epoxidation Reactions. Angew Chem Int Ed Engl 2015; 54:11740-4. [PMID: 26273792 DOI: 10.1002/anie.201505796] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2015] [Indexed: 11/06/2022]
Abstract
High-spin iron(III)-iodosylarene complexes are highly reactive in the epoxidation of olefins, in which epoxides are formed as the major products with high stereospecificity and enantioselectivity. The reactivity of the iron(III)-iodosylarene intermediates is much greater than that of the corresponding iron(IV)-oxo complex in these reactions. The iron(III)-iodosylarene species-not high-valent iron(IV)-oxo and iron(V)-oxo species-are also shown to be the active oxidants in catalytic olefin epoxidation reactions. The present results are discussed in light of the long-standing controversy on the one oxidant versus multiple oxidants hypothesis in oxidation reactions.
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Affiliation(s)
- Bin Wang
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (Korea)
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (Korea)
| | - Mi Sook Seo
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (Korea)
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750 (Korea).
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Wang B, Lee YM, Seo MS, Nam W. Mononuclear Nonheme Iron(III)-Iodosylarene and High-Valent Iron-Oxo Complexes in Olefin Epoxidation Reactions. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201505796] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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