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Rogers CJ, Asthana D, Brookfield A, Chiesa A, Timco GA, Collison D, Natrajan LS, Carretta S, Winpenny REP, Bowen AM. Modelling Conformational Flexibility in a Spectrally Addressable Molecular Multi‐Qubit Model System. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202207947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Ciarán J. Rogers
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - Deepak Asthana
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
- Department of Chemistry Ashoka University Sonipat Haryana India
| | - Adam Brookfield
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - Alessandro Chiesa
- Dipartimento di Scienze Matematiche Fisiche e Informatiche Università di Parma 43124 Parma Italy
- INFN–Sezione di Milano-Bicocca Gruppo Collegato di Parma I-43124 Parma Italy
- UdR Parma INSTM I-43124 Parma Italy
| | - Grigore A. Timco
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - David Collison
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - Louise S. Natrajan
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - Stefano Carretta
- Dipartimento di Scienze Matematiche Fisiche e Informatiche Università di Parma 43124 Parma Italy
- INFN–Sezione di Milano-Bicocca Gruppo Collegato di Parma I-43124 Parma Italy
- UdR Parma INSTM I-43124 Parma Italy
| | - Richard E. P. Winpenny
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
| | - Alice M. Bowen
- National Research Facility for Electron Paramagnetic Resonance Spectroscopy Department of Chemistry and Photon Science Institute The University of Manchester Oxford Road Manchester M13 9PL UK
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Rogers CJ, Asthana D, Brookfield A, Chiesa A, Timco GA, Collison D, Natrajan LS, Carretta S, Winpenny REP, Bowen AM. Modelling Conformational Flexibility in a Spectrally Addressable Molecular Multi-Qubit Model System. Angew Chem Int Ed Engl 2022; 61:e202207947. [PMID: 36222278 PMCID: PMC9828767 DOI: 10.1002/anie.202207947] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Indexed: 11/11/2022]
Abstract
Dipolar coupled multi-spin systems have the potential to be used as molecular qubits. Herein we report the synthesis of a molecular multi-qubit model system with three individually addressable, weakly interacting, spin 1 / 2 ${{ 1/2 }}$ centres of differing g-values. We use pulsed Electron Paramagnetic Resonance (EPR) techniques to characterise and separately address the individual electron spin qubits; CuII , Cr7 Ni ring and a nitroxide, to determine the strength of the inter-qubit dipolar interaction. Orientation selective Relaxation-Induced Dipolar Modulation Enhancement (os-RIDME) detecting across the CuII spectrum revealed a strongly correlated CuII -Cr7 Ni ring relationship; detecting on the nitroxide resonance measured both the nitroxide and CuII or nitroxide and Cr7 Ni ring correlations, with switchability of the interaction based on differing relaxation dynamics, indicating a handle for implementing EPR-based quantum information processing (QIP) algorithms.
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Affiliation(s)
- Ciarán J. Rogers
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - Deepak Asthana
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK,Department of ChemistryAshoka UniversitySonipatHaryanaIndia
| | - Adam Brookfield
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - Alessandro Chiesa
- Dipartimento di Scienze Matematiche Fisiche e InformaticheUniversità di Parma43124ParmaItaly,INFN–Sezione di Milano-BicoccaGruppo Collegato di ParmaI-43124ParmaItaly,UdR ParmaINSTMI-43124ParmaItaly
| | - Grigore A. Timco
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - David Collison
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - Louise S. Natrajan
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - Stefano Carretta
- Dipartimento di Scienze Matematiche Fisiche e InformaticheUniversità di Parma43124ParmaItaly,INFN–Sezione di Milano-BicoccaGruppo Collegato di ParmaI-43124ParmaItaly,UdR ParmaINSTMI-43124ParmaItaly
| | - Richard E. P. Winpenny
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
| | - Alice M. Bowen
- National Research Facility for Electron Paramagnetic Resonance SpectroscopyDepartment of Chemistry and Photon Science InstituteThe University of ManchesterOxford RoadManchesterM13 9PLUK
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Breitgoff FD, Keller K, Qi M, Klose D, Yulikov M, Godt A, Jeschke G. UWB DEER and RIDME distance measurements in Cu(II)-Cu(II) spin pairs. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2019; 308:106560. [PMID: 31377151 DOI: 10.1016/j.jmr.2019.07.047] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Revised: 07/12/2019] [Accepted: 07/15/2019] [Indexed: 06/10/2023]
Abstract
Distance determination by Electron Paramagnetic Resonance (EPR) based on measurements of the dipolar coupling are technically challenging for electron spin systems with broad spectra due to comparatively narrow microwave pulse excitation bandwidths. With Na4[{CuII(PyMTA)}-(stiff spacer)-{CuII(PyMTA)}] as a model compound, we compared DEER and RIDME measurements and investigated the use of frequency-swept pulses. We found very large improvements in sensitivity when substituting the monochromatic pump pulse by a frequency-swept one in DEER experiments with monochromatic observer pulses. This effect was especially strong in X band, where nearly the whole spectrum can be included in the experiment. The RIDME experiment is characterised by a trade-off in signal intensity and modulation depth. Optimal parameters are further influenced by varying steepness of the background decay. A simple 2-point optimization experiment was found to serve as good estimate to identify the mixing time of highest sensitivity. Using frequency-swept pulses in the observer sequences resulted in lower SNR in both the RIDME and the DEER experiment. Orientation selectivity was found to vary in both experiments with the detection position as well as with the settings of the pump pulse in DEER. In RIDME, orientation selection by relaxation anisotropy of the inverted spin appeared to be negligible as form factors remain relatively constant with varying mixing time. This reduces the overall observed orientation selection to the one given by the detection position. Field-averaged data from RIDME and DEER with a shaped pump pulse resulted in the same dipolar spectrum. We found that both methods have their advantages and disadvantages for given instrumental limitations and sample properties. Thus the choice of method depends on the situation at hand and we discuss which parameters should be considered for optimization.
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Affiliation(s)
- Frauke D Breitgoff
- ETH Zürich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8063 Zürich 3 Switzerland.
| | - Katharina Keller
- ETH Zürich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8063 Zürich 3 Switzerland.
| | - Mian Qi
- Faculty of Chemistry and Center for Molecular Materials (CM(2)), Bielefeld University, Universitätsstraße 25, 33615 Bielefeld, Germany
| | - Daniel Klose
- ETH Zürich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8063 Zürich 3 Switzerland
| | - Maxim Yulikov
- ETH Zürich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8063 Zürich 3 Switzerland
| | - Adelheid Godt
- Faculty of Chemistry and Center for Molecular Materials (CM(2)), Bielefeld University, Universitätsstraße 25, 33615 Bielefeld, Germany.
| | - Gunnar Jeschke
- ETH Zürich, Lab. Phys. Chem., Vladimir-Prelog-Weg 2, 8063 Zürich 3 Switzerland
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Timco GA, Fernandez A, Kostopoulos AK, Charlton JF, Lockyer SJ, Hailes TR, Adams RW, McInnes EJL, Tuna F, Vitorica-Yrezabal IJ, Whitehead GFS, Winpenny REP. Hybrid Organic-Inorganic Rotaxanes, Including a Hetero-Hybrid [3]Rotaxane Featuring Two Distinct Heterometallic Rings and a Molecular Shuttle. Angew Chem Int Ed Engl 2018; 57:10919-10922. [PMID: 29932482 DOI: 10.1002/anie.201805439] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Revised: 06/08/2018] [Indexed: 01/03/2023]
Abstract
[2] and [3] hybrid rotaxanes are reported based on {Ti7 M} rings (M is a trivalent metal such as FeIII or GaIII ). NMR studies show that [2]rotaxanes can act as molecular shuttles, while EPR studies of [3]rotaxanes show weak interactions between the paramagnetic components of the supramolecular assemblies.
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Affiliation(s)
- Grigore A Timco
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Antonio Fernandez
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Andreas K Kostopoulos
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Jodie F Charlton
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Selena J Lockyer
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Thomas R Hailes
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Ralph W Adams
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Eric J L McInnes
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Floriana Tuna
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | | | - George F S Whitehead
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
| | - Richard E P Winpenny
- The School of Chemistry, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK
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Timco GA, Fernandez A, Kostopoulos AK, Charlton JF, Lockyer SJ, Hailes TR, Adams RW, McInnes EJL, Tuna F, Vitorica-Yrezabal IJ, Whitehead GFS, Winpenny REP. Hybrid Organic-Inorganic Rotaxanes, Including a Hetero-Hybrid [3]Rotaxane Featuring Two Distinct Heterometallic Rings and a Molecular Shuttle. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201805439] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Grigore A. Timco
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Antonio Fernandez
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Andreas K. Kostopoulos
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Jodie F. Charlton
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Selena J. Lockyer
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Thomas R. Hailes
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Ralph W. Adams
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Eric J. L. McInnes
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Floriana Tuna
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | | | - George F. S. Whitehead
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
| | - Richard E. P. Winpenny
- The School of Chemistry; The University of Manchester; Oxford Road Manchester M13 9PL UK
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Giannoulis A, Oranges M, Bode BE. Monitoring Complex Formation by Relaxation-Induced Pulse Electron Paramagnetic Resonance Distance Measurements. Chemphyschem 2017; 18:2318-2321. [PMID: 28672084 PMCID: PMC5601224 DOI: 10.1002/cphc.201700666] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Indexed: 12/14/2022]
Abstract
Biomolecular complexes are often multimers fueling the demand for methods that allow unraveling their composition and geometric arrangement. Pulse electron paramagnetic resonance (EPR) spectroscopy is increasingly applied for retrieving geometric information on the nanometer scale. The emerging RIDME (relaxation‐induced dipolar modulation enhancement) technique offers improved sensitivity in distance experiments involving metal centers (e.g. on metalloproteins or proteins labelled with metal ions). Here, a mixture of a spin labelled ligand with increasing amounts of paramagnetic CuII ions allowed accurate quantification of ligand‐metal binding in the model complex formed. The distance measurement was highly accurate and critical aspects for identifying multimerization could be identified. The potential to quantify binding in addition to the high‐precision distance measurement will further increase the scope of EPR applications.
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Affiliation(s)
- Angeliki Giannoulis
- Biomedical Sciences Research Complex, Centre of Magnetic Resonance and, EaStCHEM School of Chemistry, University of St AndrewsNorth Haugh, St Andrews, KY16 9ST, UK
| | - Maria Oranges
- Biomedical Sciences Research Complex, Centre of Magnetic Resonance and, EaStCHEM School of Chemistry, University of St AndrewsNorth Haugh, St Andrews, KY16 9ST, UK
| | - Bela E Bode
- Biomedical Sciences Research Complex, Centre of Magnetic Resonance and, EaStCHEM School of Chemistry, University of St AndrewsNorth Haugh, St Andrews, KY16 9ST, UK
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