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Electronic Circular Dichroism‐Circularly Polarized Raman (eCP‐Raman): A New Form of Chiral Raman Spectroscopy. Chemistry 2022; 28:e202104302. [DOI: 10.1002/chem.202104302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2021] [Indexed: 11/07/2022]
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Wang H, Xiong W. Revealing the Molecular Physics of Lattice Self-Assembly by Vibrational Hyperspectral Imaging. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:3017-3031. [PMID: 35238562 DOI: 10.1021/acs.langmuir.1c03313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Lattice self-assemblies (LSAs), which mimic protein assemblies, were studied using a new nonlinear vibrational imaging technique called vibrational sum-frequency generation (VSFG) microscopy. This technique successfully mapped out the mesoscopic morphology, microscopic geometry, symmetry, and ultrafast dynamics of an LSA formed by β-cyclodextrin (β-CD) and sodium dodecyl sulfate (SDS). The spatial imaging also revealed correlations between these different physical properties. Such knowledge shed light on the functions and mechanical properties of LSAs. In this Feature Article, we briefly introduce the fundamental principles of the VSFG microscope and then discuss the in-depth molecular physics of the LSAs revealed by this imaging technique. The application of the VSFG microscope to the artificial LSAs also paved the way for an alternative approach to studying the structure-dynamic-function relationships of protein assemblies, which were essential for life and difficult to study because of their various and complicated interactions. We expect that the hyperspectral VSFG microscope could be broadly applied to many noncentrosymmetric soft materials.
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Li G, Alshalalfeh M, Yang Y, Cheeseman JR, Bouř P, Xu Y. Can One Measure Resonance Raman Optical Activity? Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202109345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Guojie Li
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Mutasem Alshalalfeh
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Yanqing Yang
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - James R. Cheeseman
- Gaussian Inc. 340 Quinnipiac St., Bldg. 40 Wallingford CT 06492-4050 USA
| | - Petr Bouř
- Institute of Organic Chemistry and Biochemistry Flemingovo náměstí 2 16610 Prague Czech Republic
| | - Yunjie Xu
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
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Machalska E, Zajac G, Wierzba AJ, Kapitán J, Andruniów T, Spiegel M, Gryko D, Bouř P, Baranska M. Recognition of the True and False Resonance Raman Optical Activity. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202107600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Ewa Machalska
- Faculty of Chemistry Jagiellonian University Gronostajowa 2 30-387 Krakow Poland
- Jagiellonian Centre for Experimental Therapeutics (JCET) Jagiellonian University Bobrzynskiego 14 30-348 Krakow Poland
| | - Grzegorz Zajac
- Jagiellonian Centre for Experimental Therapeutics (JCET) Jagiellonian University Bobrzynskiego 14 30-348 Krakow Poland
- Institute of Organic Chemistry and Biochemistry Academy of Sciences Flemingovo náměstí 2 16610 Prague Czech Republic
| | - Aleksandra J. Wierzba
- Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
| | - Josef Kapitán
- Department of Optics Palacký University Olomouc 17. listopadu 12 77146 Olomouc Czech Republic
| | - Tadeusz Andruniów
- Department of Chemistry Wroclaw University of Science and Technology Wyb. Wyspianskiego 27 50-370 Wroclaw Poland
| | - Maciej Spiegel
- Department of Pharmacognosy and Herbal Medicine Wroclaw Medical University Borowska 211A 50-556 Wroclaw Poland
| | - Dorota Gryko
- Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44/52 01-224 Warsaw Poland
| | - Petr Bouř
- Institute of Organic Chemistry and Biochemistry Academy of Sciences Flemingovo náměstí 2 16610 Prague Czech Republic
| | - Malgorzata Baranska
- Faculty of Chemistry Jagiellonian University Gronostajowa 2 30-387 Krakow Poland
- Jagiellonian Centre for Experimental Therapeutics (JCET) Jagiellonian University Bobrzynskiego 14 30-348 Krakow Poland
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Machalska E, Zajac G, Wierzba AJ, Kapitán J, Andruniów T, Spiegel M, Gryko D, Bouř P, Baranska M. Recognition of the True and False Resonance Raman Optical Activity. Angew Chem Int Ed Engl 2021; 60:21205-21210. [PMID: 34216087 PMCID: PMC8519086 DOI: 10.1002/anie.202107600] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/01/2021] [Indexed: 12/16/2022]
Abstract
Resonance Raman optical activity (RROA) possesses all aspects of a sensitive tool for molecular detection, but its measurement remains challenging. We demonstrate that reliable recording of RROA of chiral colorful compounds is possible, but only after considering the effect of the electronic circular dichroism (ECD) on the ROA spectra induced by the dissolved chiral compound. We show RROA for a number of model vitamin B12 derivatives that are chemically similar but exhibit distinctively different spectroscopic behavior. The ECD/ROA effect is proportional to the concentration and dependent on the optical pathlength of the light propagating through the sample. It can severely alter relative band intensities and signs in the natural RROA spectra. The spectra analyses are supported by computational modeling based on density functional theory. Neglecting the ECD effect during ROA measurement can lead to misinterpretation of the recorded spectra and erroneous conclusions about the molecular structure.
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Affiliation(s)
- Ewa Machalska
- Faculty of ChemistryJagiellonian UniversityGronostajowa 230-387KrakowPoland
- Jagiellonian Centre for Experimental Therapeutics (JCET)Jagiellonian UniversityBobrzynskiego 1430-348KrakowPoland
| | - Grzegorz Zajac
- Jagiellonian Centre for Experimental Therapeutics (JCET)Jagiellonian UniversityBobrzynskiego 1430-348KrakowPoland
- Institute of Organic Chemistry and BiochemistryAcademy of SciencesFlemingovo náměstí 216610PragueCzech Republic
| | - Aleksandra J. Wierzba
- Institute of Organic ChemistryPolish Academy of SciencesKasprzaka 44/5201-224WarsawPoland
| | - Josef Kapitán
- Department of OpticsPalacký University Olomouc17. listopadu 1277146OlomoucCzech Republic
| | - Tadeusz Andruniów
- Department of ChemistryWroclaw University of Science and TechnologyWyb. Wyspianskiego 2750-370WroclawPoland
| | - Maciej Spiegel
- Department of Pharmacognosy and Herbal MedicineWroclaw Medical UniversityBorowska 211A50-556WroclawPoland
| | - Dorota Gryko
- Institute of Organic ChemistryPolish Academy of SciencesKasprzaka 44/5201-224WarsawPoland
| | - Petr Bouř
- Institute of Organic Chemistry and BiochemistryAcademy of SciencesFlemingovo náměstí 216610PragueCzech Republic
| | - Malgorzata Baranska
- Faculty of ChemistryJagiellonian UniversityGronostajowa 230-387KrakowPoland
- Jagiellonian Centre for Experimental Therapeutics (JCET)Jagiellonian UniversityBobrzynskiego 1430-348KrakowPoland
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Li G, Alshalalfeh M, Yang Y, Cheeseman JR, Bouř P, Xu Y. Can One Measure Resonance Raman Optical Activity? Angew Chem Int Ed Engl 2021; 60:22004-22009. [PMID: 34347923 DOI: 10.1002/anie.202109345] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Indexed: 11/10/2022]
Abstract
Resonance Raman optical activity (RROA) is commonly measured as the difference in intensity of Raman scattered right and left circularly polarized light, IR -IL , when a randomly polarized light is in resonance with a chiral molecule. Strong and sometimes mono-signate experimental RROA spectra of several chiral solutes were reported previously, although their signs and relative intensities could not be reproduced theoretically. By examining multiple light-matter interaction events which can occur simultaneously under resonance, we show that a new form of chiral Raman spectroscopy, eCP-Raman, a combination of electronic circular dichroism and circularly polarized Raman, prevails. By incorporating the finite-lifetime approach for resonance, the experimental patterns of the model chiral solutes are captured theoretically by eCP-Raman, without any RROA contribution. The results open opportunity for applications of eCP-Raman spectroscopy and for extracting true RROA experimentally.
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Affiliation(s)
- Guojie Li
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - Mutasem Alshalalfeh
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - Yanqing Yang
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
| | - James R Cheeseman
- Gaussian Inc., 340 Quinnipiac St., Bldg. 40, Wallingford, CT, 06492-4050, USA
| | - Petr Bouř
- Institute of Organic Chemistry and Biochemistry, Flemingovo náměstí 2, 16610, Prague, Czech Republic
| | - Yunjie Xu
- Department of Chemistry, University of Alberta, Edmonton, Alberta, T6G 2G2, Canada
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Wu T, Li G, Kapitán J, Kessler J, Xu Y, Bouř P. Two Spectroscopies in One: Interference of Circular Dichroism and Raman Optical Activity. Angew Chem Int Ed Engl 2020; 59:21895-21898. [PMID: 32926516 PMCID: PMC7894312 DOI: 10.1002/anie.202011146] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Indexed: 12/19/2022]
Abstract
Previously, we and other laboratories have reported an unusual and strong Raman optical activity (ROA) induced in solvents by chiral dyes. Various theories of the phenomenon appeared, but they were not capable of explaining fully the observed ROA band signs and intensities. In this work, an analysis based both on the light scattering theory and dedicated experiments provides a more complete understanding. For example, double-cell magnetic circular dichroism and magnetic ROA experiments with copper-porphyrin complex show that the induced chirality is observed without any contact of the solvents with the complex. The results thus indicate that a combination of electronic circular dichroism (ECD) with the polarized Raman scattering is responsible for the effect. The degree of circularity of solvent vibrational bands is a principal molecular property participating in the event. The insight and the possibility to predict the chirality transfer promise future applications in spectroscopy, chemical analysis and polarized imaging.
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Affiliation(s)
- Tao Wu
- Institute of Organic Chemistry and BiochemistryFlemingovo náměstí 216610PragueCzech Republic
| | - Guojie Li
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
| | - Josef Kapitán
- Department of OpticsPalacký University Olomouc17. listopadu 1277146OlomoucCzech Republic
| | - Jiří Kessler
- Institute of Organic Chemistry and BiochemistryFlemingovo náměstí 216610PragueCzech Republic
| | - Yunjie Xu
- Department of ChemistryUniversity of AlbertaEdmontonAlbertaT6G 2G2Canada
| | - Petr Bouř
- Institute of Organic Chemistry and BiochemistryFlemingovo náměstí 216610PragueCzech Republic
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Wu T, Li G, Kapitán J, Kessler J, Xu Y, Bouř P. Two Spectroscopies in One: Interference of Circular Dichroism and Raman Optical Activity. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202011146] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Tao Wu
- Institute of Organic Chemistry and Biochemistry Flemingovo náměstí 2 16610 Prague Czech Republic
| | - Guojie Li
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Josef Kapitán
- Department of Optics Palacký University Olomouc 17. listopadu 12 77146 Olomouc Czech Republic
| | - Jiří Kessler
- Institute of Organic Chemistry and Biochemistry Flemingovo náměstí 2 16610 Prague Czech Republic
| | - Yunjie Xu
- Department of Chemistry University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Petr Bouř
- Institute of Organic Chemistry and Biochemistry Flemingovo náměstí 2 16610 Prague Czech Republic
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Palomo L, Rodríguez R, Medina S, Quiñoá E, Casado J, Freire F, Ramírez FJ. Raman Optical Activity (ROA) as a New Tool to Elucidate the Helical Structure of Poly(phenylacetylene)s. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000651] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Luis Palomo
- Departamento de Química Física Facultad de Ciencias Universidad de Málaga Campus de Teatinos Málaga 29071 Spain
| | - Rafael Rodríguez
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Santiago de Compostela 15782 Spain
| | - Samara Medina
- Departamento de Química Física Facultad de Ciencias Universidad de Málaga Campus de Teatinos Málaga 29071 Spain
| | - Emilio Quiñoá
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Santiago de Compostela 15782 Spain
| | - Juan Casado
- Departamento de Química Física Facultad de Ciencias Universidad de Málaga Campus de Teatinos Málaga 29071 Spain
| | - Félix Freire
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica Universidade de Santiago de Compostela Santiago de Compostela 15782 Spain
| | - Francisco J. Ramírez
- Departamento de Química Física Facultad de Ciencias Universidad de Málaga Campus de Teatinos Málaga 29071 Spain
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Palomo L, Rodríguez R, Medina S, Quiñoá E, Casado J, Freire F, Ramírez FJ. Raman Optical Activity (ROA) as a New Tool to Elucidate the Helical Structure of Poly(phenylacetylene)s. Angew Chem Int Ed Engl 2020; 59:9080-9087. [PMID: 32125060 DOI: 10.1002/anie.202000651] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2020] [Revised: 02/18/2020] [Indexed: 02/02/2023]
Abstract
Poly(phenylacetylene)s are a family of helical polymers constituted by conjugated double bonds. Raman spectra of these polymers show a structural fingerprint of the polyene backbone which, in combination with its helical orientation, makes them good candidates to be studied by Raman optical activity (ROA). Four different well-known poly(phenylacetylene)s adopting different scaffolds and ten different helical senses have been prepared. Raman and ROA spectra were recorded and allowed to establish ROA-spectrum/helical-sense relationships: a left/right-handed orientation of the polyene backbone (Mhelix /Phelix ) produces a triplet of positive/negative ROA bands. Raman and ROA spectra of each polymer exhibited the same profile, and the sign of the ROA spectrum was opposite to the lowest-energy electronic circular dichroism (ECD) band, indicating a resonance effect. Resonance ROA appears then as an indicator of the helical sense of poly(phenylacetylene)s, especially for those with an extra Cotton band in the ECD spectrum, where a wrong helical sense is assigned based on ECD, while ROA alerts of this misassignment.
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Affiliation(s)
- Luis Palomo
- Departamento de Química Física, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, Málaga, 29071, Spain
| | - Rafael Rodríguez
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, 15782, Spain
| | - Samara Medina
- Departamento de Química Física, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, Málaga, 29071, Spain
| | - Emilio Quiñoá
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, 15782, Spain
| | - Juan Casado
- Departamento de Química Física, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, Málaga, 29071, Spain
| | - Félix Freire
- Centro Singular de Investigación en Química Biolóxica e Materials Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, 15782, Spain
| | - Francisco J Ramírez
- Departamento de Química Física, Facultad de Ciencias, Universidad de Málaga, Campus de Teatinos, Málaga, 29071, Spain
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