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Koupepidou K, Nikolayenko VI, Sensharma D, Bezrukov AA, Vandichel M, Nikkhah SJ, Castell DC, Oyekan KA, Kumar N, Subanbekova A, Vandenberghe WG, Tan K, Barbour LJ, Zaworotko MJ. One Atom Can Make All the Difference: Gas-Induced Phase Transformations in Bisimidazole-Linked Diamondoid Coordination Networks. J Am Chem Soc 2023; 145:10197-10207. [PMID: 37099724 PMCID: PMC10176468 DOI: 10.1021/jacs.3c01113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/28/2023]
Abstract
Coordination networks (CNs) that undergo gas-induced transformation from closed (nonporous) to open (porous) structures are of potential utility in gas storage applications, but their development is hindered by limited control over their switching mechanisms and pressures. In this work, we report two CNs, [Co(bimpy)(bdc)]n (X-dia-4-Co) and [Co(bimbz)(bdc)]n (X-dia-5-Co) (H2bdc = 1,4-benzendicarboxylic acid; bimpy = 2,5-bis(1H-imidazole-1-yl)pyridine; bimbz = 1,4-bis(1H-imidazole-1-yl)benzene), that both undergo transformation from closed to isostructural open phases involving at least a 27% increase in cell volume. Although X-dia-4-Co and X-dia-5-Co only differ from one another by one atom in their N-donor linkers (bimpy = pyridine, and bimbz = benzene), this results in different pore chemistry and switching mechanisms. Specifically, X-dia-4-Co exhibited a gradual phase transformation with a steady increase in the uptake when exposed to CO2, whereas X-dia-5-Co exhibited a sharp step (type F-IV isotherm) at P/P0 ≈ 0.008 or P ≈ 3 bar (195 or 298 K, respectively). Single-crystal X-ray diffraction, in situ powder XRD, in situ IR, and modeling (density functional theory calculations, and canonical Monte Carlo simulations) studies provide insights into the nature of the switching mechanisms and enable attribution of pronounced differences in sorption properties to the changed pore chemistry.
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Affiliation(s)
- Kyriaki Koupepidou
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Varvara I Nikolayenko
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Debobroto Sensharma
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Andrey A Bezrukov
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Matthias Vandichel
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
- Advanced Materials and Bioengineering Research (AMBER) Centre, Dublin D02 R590, Republic of Ireland
| | - Sousa Javan Nikkhah
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Dominic C Castell
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Kolade A Oyekan
- Department of Materials Science and Engineering, University of Texas at Dallas, Richardson, Texas 75080, United States
| | - Naveen Kumar
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - Aizhamal Subanbekova
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
| | - William G Vandenberghe
- Department of Materials Science and Engineering, University of Texas at Dallas, Richardson, Texas 75080, United States
| | - Kui Tan
- Department of Materials Science and Engineering, University of Texas at Dallas, Richardson, Texas 75080, United States
| | - Leonard J Barbour
- Department of Chemistry and Polymer Science, University of Stellenbosch, Matieland 7602, South Africa
| | - Michael J Zaworotko
- Bernal Institute, Department of Chemical Sciences, University of Limerick, Limerick V94 T9PX, Republic of Ireland
- Advanced Materials and Bioengineering Research (AMBER) Centre, Dublin D02 R590, Republic of Ireland
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Roztocki K, Bon V, Senkovska I, Matoga D, Kaskel S. A Logic Gate Based on a Flexible Metal-Organic Framework (JUK-8) for the Concomitant Detection of Hydrogen and Oxygen. Chemistry 2022; 28:e202202255. [PMID: 35899822 PMCID: PMC9804503 DOI: 10.1002/chem.202202255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Indexed: 01/05/2023]
Abstract
We present an autonomous, chemical logic gate based on a switchable metal-organic framework (MOF) composite, containing carbon nanoparticles and a Pt catalyst. The switchable MOF composite performs as AND logic gate. Hydrogen and oxygen gas streams serve as binary inputs. Catalytically formed water induces a structural transition (crystal volume expansion) of the MOF, and as a consequence, a detectable drop in conductance of the composite as a 'true' output only if both gases come in contact with the composite.
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Affiliation(s)
- Kornel Roztocki
- Faculty of ChemistryAdam Mickiewicz UniversityUniwersytetu Poznańskiego 861-614PoznańPoland
| | - Volodymyr Bon
- Inorganic Chemistry ITechnische Universität DresdenBergstrasse 6601062DresdenGermany
| | - Irena Senkovska
- Inorganic Chemistry ITechnische Universität DresdenBergstrasse 6601062DresdenGermany
| | - Dariusz Matoga
- Faculty of ChemistryJagiellonian UniversityGronostajowa 230-387KrakówPoland
| | - Stefan Kaskel
- Inorganic Chemistry ITechnische Universität DresdenBergstrasse 6601062DresdenGermany
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Sławek A, Jajko G, Ogorzały K, Dubbeldam D, Vlugt TJH, Makowski W. The Influence of UiO‐66 Metal–Organic Framework Structural Defects on Adsorption and Separation of Hexane Isomers. Chemistry 2022; 28:e202200030. [DOI: 10.1002/chem.202200030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Indexed: 11/08/2022]
Affiliation(s)
- Andrzej Sławek
- Academic Centre for Materials and Nanotechnology AGH University of Science and Technology Kawiory 30 30-055 Kraków Poland
| | - Gabriela Jajko
- Faculty of Chemistry Jagiellonian University Ul. Gronostajowa 2 30-387 Kraków Poland
| | - Karolina Ogorzały
- Faculty of Chemistry Jagiellonian University Ul. Gronostajowa 2 30-387 Kraków Poland
| | - David Dubbeldam
- Van't Hoff Institute for Molecular Sciences (HIMS) University of Amsterdam PO Box 94157 1090 GD Amsterdam (The Netherlands
| | - Thijs J. H. Vlugt
- Process & Energy Department Faculty of Mechanical Maritime and Materials Engineering Delft University of Science and Technology Leeghwaterstraat 39 2628CB Delft (The Netherlands
| | - Wacław Makowski
- Faculty of Chemistry Jagiellonian University Ul. Gronostajowa 2 30-387 Kraków Poland
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Maniak H, Talma M, Giurg M. Inhibitory Potential of New Phenolic Hydrazide-Hydrazones with a Decoy Substrate Fragment towards Laccase from a Phytopathogenic Fungus: SAR and Molecular Docking Studies. Int J Mol Sci 2021; 22:ijms222212307. [PMID: 34830189 PMCID: PMC8617976 DOI: 10.3390/ijms222212307] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 11/09/2021] [Accepted: 11/10/2021] [Indexed: 01/22/2023] Open
Abstract
Laccase from pathogenic fungi participates in both the delignification and neutralization of phytoantibiotics. Furthermore, it interferes with the hormone signaling in plants and catalyzes melanization. Infections of these pathogens contribute to loss in forestry, agriculture, and horticulture. As there is still a need to expand knowledge on efficient defense strategies against phytopathogenic fungi, the present study aimed to reveal more information on the molecular mechanisms of laccase inhibition with natural and natural-like carboxylic acid semi-synthetic derivatives. A set of hydrazide-hydrazones derived from carboxylic acids, generally including electron-rich arene units that serve as a decoy substrate, was synthesized and tested with laccase from Trametes versicolor. The classic synthesis of the title inhibitors proceeded with good to almost quantitative yield. Ninety percent of the tested molecules were active in the range of KI = 8–233 µM and showed different types of action. Such magnitude of inhibition constants qualified the hydrazide-hydrazones as strong laccase inhibitors. Molecular docking studies supporting the experimental data explained the selected derivatives’ interactions with the enzyme. The results are promising in developing new potential antifungal agents mitigating the damage scale in the plant cultivation, gardening, and horticulture sectors.
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Affiliation(s)
- Halina Maniak
- Department of Micro, Nano and Bioprocess Engineering, Faculty of Chemistry, Wroclaw University of Science and Technology, Norwida 4/6, 50-373 Wrocław, Poland
- Correspondence: (H.M.); (M.G.); Tel.: +48-713203314 (H.M.); +48-713203616 (M.G.)
| | - Michał Talma
- Department of Bioorganic Chemistry, Faculty of Chemistry, Wroclaw University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland;
| | - Mirosław Giurg
- Department of Organic and Medicinal Chemistry, Faculty of Chemistry, Wroclaw University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
- Correspondence: (H.M.); (M.G.); Tel.: +48-713203314 (H.M.); +48-713203616 (M.G.)
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Lee J, Kim Y, Son Y, Kim H, Nam Choi Y, D'Alessandro D, Chandra Rao P, Yoon M. Breathing-Assisted Selective Adsorption of C 8 Alkyl Aromatics in Zn-Based Metal-Organic Frameworks. Chemistry 2021; 27:14851-14857. [PMID: 34427952 DOI: 10.1002/chem.202102640] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Indexed: 11/06/2022]
Abstract
The breathing phenomenon in metal-organic frameworks (MOFs) has revealed supramolecular host-guest interactions that could be beneficial for chemical separation in numerous industrial applications. The cost-effective purification of C8 alkyl aromatics such as o-xylene, m-xylene, p-xylene, and ethylbenzene remains challenging owing to their similar molecular structures, boiling points, kinetic diameters, polarities, etc. Herein, we report two Zn-based pillar-bilayered MOFs, denoted [Zn2 (aip)2 (pillar)] (aip=5-aminoisophthalic acid; pillar: bpy=4,4'-bipyridine or bpe=1,2-bis(4-pyridyl)ethane) that exhibit a breathing effect depending on the adsorbed guest molecules. Guest-dependent sorption studies in organic solvents such as N,N-dimethylformamide, methanol, benzene, and water vapor display reversible structural flexibility through the breathing effect in both framework compounds. The experiments conducted on C8 -alkyl aromatics resulting in both MOF compounds can access these isomers in the shrunken pores, and thereby expand the pore size by framework breathing. In C8 binary mixtures, these Zn-MOFs exhibit selective sorption properties based on the different interactions between guest C8 aromatics and the framework structure.
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Affiliation(s)
- Jihyun Lee
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, Daegu, 41566, Republic of Korea.,Department of Nanochemistry, Gachon University, Seongnam, 13120, Republic of Korea
| | - Younghoon Kim
- Center for Self-assembly and Complexity, Institute for Basic Science, Department of Chemistry, POSTECH, Pohang, 37673, Republic of Korea
| | - Younghu Son
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, Daegu, 41566, Republic of Korea
| | - Hyehyun Kim
- Neutron Science Division, Korea Atomic Energy Research Institute, Daejeon, 34057, Republic of Korea
| | - Yong Nam Choi
- Nuclear Hydrogen Research Team, Korea Atomic Energy Research Institute, Daejeon, 34057, Republic of Korea
| | - Deanna D'Alessandro
- School of Chemistry, The University of Sydney, Sydney, 2006, New South Wales, Australia
| | - Purna Chandra Rao
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, Daegu, 41566, Republic of Korea
| | - Minyoung Yoon
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, Daegu, 41566, Republic of Korea
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Formalik F, Neimark AV, Rogacka J, Firlej L, Kuchta B. Pore opening and breathing transitions in metal-organic frameworks: Coupling adsorption and deformation. J Colloid Interface Sci 2020; 578:77-88. [DOI: 10.1016/j.jcis.2020.05.105] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Revised: 05/27/2020] [Accepted: 05/28/2020] [Indexed: 11/28/2022]
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