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Zucolotto Cocca LH, Valverde JVP, Leite CM, Moreno NS, Neto AL, Macedo AG, Pratavieira S, Silva DL, Rodrigues PC, Zucolotto V, Mendonça CR, De Boni L. Advancements in organic fluorescent materials: unveiling the potential of peripheral group modification in dithienyl-diketopyrrolopyrrole derivatives for one- and two-photon bioimaging. J Mater Chem B 2025; 13:1013-1023. [PMID: 39629620 DOI: 10.1039/d4tb02291b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2025]
Abstract
The quest for novel organic fluorescent materials capable of two-photon absorption (2PA) has intensified in recent years due to their promising applications in biological imaging. Two-photon fluorescence microscopy (2PFM) offers high spatial-temporal resolution, reduced photodamage, and deeper tissue penetration compared to conventional techniques. However, the development of bright two-photon molecular markers remains a challenge, necessitating compounds with high fluorescence quantum yield and 2PA cross-section (σ2PA). Strategies such as increasing π-conjugation have shown promise but are hindered by synthesis complexities and limited biocompatibility. Alternatively, incorporating electron-donating (ED) or electron-withdrawing (EW) peripheral groups in a main structure has emerged as a viable approach, leading to significant enhancements in σ2PA. This study highlights the advantages and challenges of these strategies, emphasizing the importance of exploring new organic compounds and evaluating the efficacy of peripheral groups for advanced two-photon bioimaging applications.
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Affiliation(s)
- Leandro H Zucolotto Cocca
- Photonics Group, Institute of Physics, Federal University of Goiás, Goiânia, 74690-900, GO, Brazil.
- Sao Carlos Physics Institute, University of São Paulo, CP 369, 13560-970 São Carlos, SP, Brazil
| | - João V P Valverde
- Sao Carlos Physics Institute, University of São Paulo, CP 369, 13560-970 São Carlos, SP, Brazil
| | - Celisnolia M Leite
- Nanomedicine and Nanotoxicology Group, Sao Carlos Physics Institute, University of São Paulo, 13560-970 São Carlos, SP, Brazil
| | - Natália S Moreno
- Nanomedicine and Nanotoxicology Group, Sao Carlos Physics Institute, University of São Paulo, 13560-970 São Carlos, SP, Brazil
| | - Alfredo L Neto
- Graduate Program in Chemistry, Federal University of Technology - Parana (UTFPR), CP 81531-990 Curitiba, Brazil
| | - Andreia G Macedo
- Graduate Program in Chemistry, Federal University of Technology - Parana (UTFPR), CP 81531-990 Curitiba, Brazil
- Graduate Program in Physics and Astronomy, Federal University of Technology - Paraná (UTFPR), CP 81531-990 Curitiba, Brazil
| | - Sebastião Pratavieira
- Sao Carlos Physics Institute, University of São Paulo, CP 369, 13560-970 São Carlos, SP, Brazil
| | - Daniel L Silva
- Department of Natural Sciences, Mathematics and Education, Federal University of São Carlos, Rod. Anhanguera - Km 174, 13600-970 Araras, SP, Brazil
| | - Paula C Rodrigues
- Graduate Program in Chemistry, Federal University of Technology - Parana (UTFPR), CP 81531-990 Curitiba, Brazil
- Graduate Program in Physics and Astronomy, Federal University of Technology - Paraná (UTFPR), CP 81531-990 Curitiba, Brazil
| | - Valtencir Zucolotto
- Nanomedicine and Nanotoxicology Group, Sao Carlos Physics Institute, University of São Paulo, 13560-970 São Carlos, SP, Brazil
| | - Cleber R Mendonça
- Sao Carlos Physics Institute, University of São Paulo, CP 369, 13560-970 São Carlos, SP, Brazil
| | - Leonardo De Boni
- Sao Carlos Physics Institute, University of São Paulo, CP 369, 13560-970 São Carlos, SP, Brazil
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Kim D, Bossi ML, Belov VN, Hell SW. Supramolecular Complex of Cucurbit[7]uril with Diketopyrrolopyrole Dye: Fluorescence Boost, Biolabeling and Optical Microscopy. Angew Chem Int Ed Engl 2024; 63:e202410217. [PMID: 38881490 DOI: 10.1002/anie.202410217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2024] [Revised: 06/13/2024] [Accepted: 06/14/2024] [Indexed: 06/18/2024]
Abstract
New photostable and bright supramolecular complexes based on cucurbit[7]uril (CB7) host and diketopyrrolopyrole (DPP) guest dyes having two positively charged 4-(trimethylammonio)phenyl groups were prepared and characterized. The dye core displays large Stokes shift (in H2O, abs./emission max. 480/550 nm; ϵ~19 000, τfl>4 ns), strong binding with the host (~560 nM Kd) and a linker affording fluorescence detection of bioconjugates with antibody and nanobody. Combination of protein-functionalized DPP dye with CB7 improves photostability and affords up to 12-fold emission gain. Two-color confocal and stimulated emission depletion (STED) microscopy with 595 nm or 655 nm STED depletion lasers shows that the presence of CB7 not only leads to improved brightness and image quality, but also results in DPP becoming cell-permeable.
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Affiliation(s)
- Dojin Kim
- Department of NanoBiophotonics, Max Planck Institute for Multidisciplinary Sciences (MPI-NAT), Am Fassberg 11, 37077, Göttingen, Germany
| | - Mariano L Bossi
- Department of Optical Nanoscopy, Max Planck Institute for Medical Research (MPI-MR), Jahnstrasse 29, 69120, Heidelberg, Germany
| | - Vladimir N Belov
- Department of NanoBiophotonics, Max Planck Institute for Multidisciplinary Sciences (MPI-NAT), Am Fassberg 11, 37077, Göttingen, Germany
| | - Stefan W Hell
- Department of NanoBiophotonics, Max Planck Institute for Multidisciplinary Sciences (MPI-NAT), Am Fassberg 11, 37077, Göttingen, Germany
- Department of Optical Nanoscopy, Max Planck Institute for Medical Research (MPI-MR), Jahnstrasse 29, 69120, Heidelberg, Germany
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Pieczykolan M, Derr JB, Chrayteh A, Koszarna B, Clark JA, Vakuliuk O, Jacquemin D, Vullev VI, Gryko DT. The Synthesis and Photophysical Properties of Weakly Coupled Diketopyrrolopyrroles. Molecules 2021; 26:molecules26164744. [PMID: 34443329 PMCID: PMC8398321 DOI: 10.3390/molecules26164744] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Revised: 07/21/2021] [Accepted: 07/25/2021] [Indexed: 11/22/2022] Open
Abstract
Three centrosymmetric diketopyrrolopyrroles possessing either two 2-(2′-methoxyphenyl)benzothiazole or two 2-(2′-methoxyphenyl)benzoxazolo-thiophene scaffolds were synthesized in a straightforward manner, and their photophysical properties were investigated. Their emission was significantly bathochromically shifted as compared with that of simple DPPs reaching 650 nm. Judging from theoretical calculations performed with time-dependent density functional theory, in all three cases the excited state was localized on the DPP core and there was no significant CT character. Consequently, emission was almost independent of solvents’ polarity. DPPs possessing 2,5-thiophene units vicinal to DPP core play a role in electronic transitions, resulting in bathochromically shifted absorption and emission. Interestingly, as judged from transient absorption dynamics, intersystem crossing was responsible for the deactivation of the excited states of DPPs possessing para linkers but not in the case of dye bearing meta linker.
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Affiliation(s)
- Michał Pieczykolan
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland; (M.P.); (B.K.); (O.V.)
| | - James B. Derr
- Department of Biochemistry, University of California, Riverside, CA 92521, USA;
| | - Amara Chrayteh
- CEISAM Laboratory—UMR 6230, University of Nantes, CNTS, 44035 Nantes, France;
| | - Beata Koszarna
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland; (M.P.); (B.K.); (O.V.)
| | - John A. Clark
- Department of Bioengineering, University of California, Riverside, CA 92521, USA;
| | - Olena Vakuliuk
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland; (M.P.); (B.K.); (O.V.)
| | - Denis Jacquemin
- CEISAM Laboratory—UMR 6230, University of Nantes, CNTS, 44035 Nantes, France;
- Correspondence: (D.J.); (V.I.V.); (D.T.G.)
| | - Valentine I. Vullev
- Department of Biochemistry, University of California, Riverside, CA 92521, USA;
- Department of Bioengineering, University of California, Riverside, CA 92521, USA;
- Correspondence: (D.J.); (V.I.V.); (D.T.G.)
| | - Daniel T. Gryko
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland; (M.P.); (B.K.); (O.V.)
- Correspondence: (D.J.); (V.I.V.); (D.T.G.)
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Skonieczny K, Papadopoulos I, Thiel D, Gutkowski K, Haines P, McCosker PM, Laurent AD, Keller PA, Clark T, Jacquemin D, Guldi DM, Gryko DT. How To Make Nitroaromatic Compounds Glow: Next-Generation Large X-Shaped, Centrosymmetric Diketopyrrolopyrroles. Angew Chem Int Ed Engl 2020; 59:16104-16113. [PMID: 32492240 PMCID: PMC7689858 DOI: 10.1002/anie.202005244] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Revised: 05/15/2020] [Indexed: 12/17/2022]
Abstract
Red‐emissive π‐expanded diketopyrrolopyrroles (DPPs) with fluorescence reaching λ=750 nm can be easily synthesized by a three‐step strategy involving the preparation of diketopyrrolopyrrole followed by N‐arylation and subsequent intramolecular palladium‐catalyzed direct arylation. Comprehensive spectroscopic assays combined with first‐principles calculations corroborated that both N‐arylated and fused DPPs reach a locally excited (S1) state after excitation, followed by internal conversion to states with solvent and structural relaxation, before eventually undergoing intersystem crossing. Only the structurally relaxed state is fluorescent, with lifetimes in the range of several nanoseconds and tens of picoseconds in nonpolar and polar solvents, respectively. The lifetimes correlate with the fluorescence quantum yields, which range from 6 % to 88 % in nonpolar solvents and from 0.4 % and 3.2 % in polar solvents. A very inefficient (T1) population is responsible for fluorescence quantum yields as high as 88 % for the fully fused DPP in polar solvents.
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Affiliation(s)
- Kamil Skonieczny
- Institute of Organic Chemistry, PAS. 44/52 Kasprzaka, 01-224, Warsaw, Poland
| | - Ilias Papadopoulos
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Dominik Thiel
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Krzysztof Gutkowski
- Institute of Organic Chemistry, PAS. 44/52 Kasprzaka, 01-224, Warsaw, Poland
| | - Philipp Haines
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Patrick M McCosker
- Department of Chemistry and Pharmacy & Computer-Chemie-Center (CCC), Friedrich-Alexander-Universität Erlangen-Nürnberg, Nägelsbachstrasse 25, 91052, Erlangen, Germany.,School of Chemistry & Molecular Bioscience, Molecular Horizons, University of Wollongong, Wollongong, NSW, 2522, Australia.,Illawarra Health & Medical Research Institute, Wollongong, NSW, 2522, Australia
| | - Adèle D Laurent
- Université de Nantes, CNRS, CEISAM UMR, 6230, Nantes, France
| | - Paul A Keller
- School of Chemistry & Molecular Bioscience, Molecular Horizons, University of Wollongong, Wollongong, NSW, 2522, Australia.,Illawarra Health & Medical Research Institute, Wollongong, NSW, 2522, Australia
| | - Timothy Clark
- Department of Chemistry and Pharmacy & Computer-Chemie-Center (CCC), Friedrich-Alexander-Universität Erlangen-Nürnberg, Nägelsbachstrasse 25, 91052, Erlangen, Germany
| | - Denis Jacquemin
- Université de Nantes, CNRS, CEISAM UMR, 6230, Nantes, France
| | - Dirk M Guldi
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM), Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstrasse 3, 91058, Erlangen, Germany
| | - Daniel T Gryko
- Institute of Organic Chemistry, PAS. 44/52 Kasprzaka, 01-224, Warsaw, Poland
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Skonieczny K, Papadopoulos I, Thiel D, Gutkowski K, Haines P, McCosker PM, Laurent AD, Keller PA, Clark T, Jacquemin D, Guldi DM, Gryko DT. How To Make Nitroaromatic Compounds Glow: Next‐Generation Large X‐Shaped, Centrosymmetric Diketopyrrolopyrroles. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202005244] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Kamil Skonieczny
- Institute of Organic Chemistry PAS. 44/52 Kasprzaka 01-224 Warsaw Poland
| | - Ilias Papadopoulos
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM) Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) Egerlandstrasse 3 91058 Erlangen Germany
| | - Dominik Thiel
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM) Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) Egerlandstrasse 3 91058 Erlangen Germany
| | | | - Philipp Haines
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM) Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) Egerlandstrasse 3 91058 Erlangen Germany
| | - Patrick M. McCosker
- Department of Chemistry and Pharmacy & Computer-Chemie-Center (CCC) Friedrich-Alexander-Universität Erlangen-Nürnberg Nägelsbachstrasse 25 91052 Erlangen Germany
- School of Chemistry & Molecular Bioscience, Molecular Horizons University of Wollongong Wollongong NSW 2522 Australia
- Illawarra Health & Medical Research Institute Wollongong NSW 2522 Australia
| | | | - Paul A. Keller
- School of Chemistry & Molecular Bioscience, Molecular Horizons University of Wollongong Wollongong NSW 2522 Australia
- Illawarra Health & Medical Research Institute Wollongong NSW 2522 Australia
| | - Timothy Clark
- Department of Chemistry and Pharmacy & Computer-Chemie-Center (CCC) Friedrich-Alexander-Universität Erlangen-Nürnberg Nägelsbachstrasse 25 91052 Erlangen Germany
| | | | - Dirk M. Guldi
- Department of Chemistry and Pharmacy & Interdisciplinary Center for Molecular Materials (ICMM) Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) Egerlandstrasse 3 91058 Erlangen Germany
| | - Daniel T. Gryko
- Institute of Organic Chemistry PAS. 44/52 Kasprzaka 01-224 Warsaw Poland
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