Toward the Isolation of Functional Organic Nanotubes

Supramolecular-Macrocycle-Based Crystalline Organic Materials

Supramolecular macrocycles are well known as guest receptors in supramolecular chemistry, especially host-guest chemistry. In addition to their wide applications in host-guest chemistry and related areas, macrocycles have also been employed to construct crystalline organic materials (COMs) owing to their particular structures that combine both rigidity and adaptivity. There are two main types of supramolecular-macrocycle-based COMs: those constructed from macrocycles themselves and those prepared from macrocycles with other organic linkers. This review summarizes recent developments in supramolecular-macrocycle-based COMs, which are categorized by various types of macrocycles, including cyclodextrins, calixarenes, resorcinarenes, pyrogalloarenes, cucurbiturils, pillararenes, and others. Effort is made to focus on the structures of supramolecular-macrocycle-based COMs and their structure-function relationships. In addition, the application of supramolecular-macrocycle-based COMs in gas storage or separation, molecular separation, solid-state electrolytes, proton conduction, iodine capture, water or environmental treatment, etc., are also presented. Finally, perspectives and future challenges in the field of supramolecular-macrocycle-based COMs are discussed.

A giant hybrid organic–inorganic octahedron from a narrow rim carboxylate calixarene

Here we discovered an unprecedented giant octahedral coordination compound bearing 16 Zn²⁺, 12 Na⁺, 8 O²⁻, 4 OH⁻, 13 H₂O and 6 L⁴⁻ ligands [L⁴⁻ = fully deprotonated tetra(carboxymethoxy)calix[4]arene].

Hollow and Solid Spheres Assembled from Functionalized Macrocycles Containing Adamantane

An adamantane-based macrocycle possessing eight hydroxyl groups (1) was synthesized, in which the macrocyclic framework comprises two disubstituted adamantane molecules bearing phenyl derivatives connected to two biphenylene spacers by oxygen atoms. Furthermore, functionalized macrocycles containing methyl (2) and methoxycarbonylmethyl (3) groups were prepared. From the X-ray crystallographic analysis, the backbone of the macrocycles in all crystals had a nearly hexagonal shape with a cavity and these macrocycles could be arranged into different tubular structures dependent on the substituents. In acetone, macrocycle (1) formed stable hollow spherical aggregates with multilayer membranes. In contrast, macrocycle (3) exhibited no production of self-assembled materials in chloroform. The addition of hexane into the solution caused the generation of solid spheres and their fused network aggregates, which were finally transformed into crystals owing to the solvent effects.

Stimuli-controlled self-assembly of diverse tubular aggregates from one single small monomer

The design and synthesis of new stimuli-responsive hydrogen-bonding monomers that display a diversity of self-assembly pathways is of central importance in supramolecular chemistry. Here we describe the aggregation properties of a simple, intrinsically C2-symmetric enantiopure bicyclic cavity compound bearing a terminally unsubstituted ureidopyrimidinone fragment fused with a pyrrole moiety in different solvents and in the absence and presence of C60 and C70 guests. The tetrameric cyclic aggregate is selectively obtained in chlorinated solvents, where only part of the available hydrogen bonding sites are utilized, whereas in toluene or upon addition of C70 guests, further aggregation into tubular supramolecular polymers is achieved. The open-end cyclic assemblies rearrange into a closed-shell capsule upon introduction of C60 with an accompanied symmetry breaking of the monomer. Our study demonstrates that a C60 switch can be used to simultaneously control the topology and occupancy of tubular assemblies resulting from the aggregation of small monomers.

Unexpected formation of a tubular architecture by optically active pure organic calixsalen

Herein, an unusual tubular formation of a supramolecular organic framework by optically active macrocyclic calixsalen is shown via single crystal X-ray diffraction.

Isorecticular Synthesis of Dissectible Molecular Bamboo Tubes of Hexarhenium(I) Benzene-1,2,3,4,5,6-hexaolate Complexes

A family of bamboo-like metal-organic nanotubes consisting of in situ synthesized macromolecular blocks (MB) is reported. The MBs are composed of six fac-(CO)3 Re cores, one benzene-1,2,3,4,5,6-hexaolate plate, and six pyridine-derivative pillar ligands, which have a doubly tri-legged geometry and can be mutually assembled, piece by piece. This entire system is characterized as a simple but precise supramolecular complexation of these macromolecular blocks and further introduces an archetypal approach to systematically constructing a tunable form of dissectible molecular bamboo tubes.

Syntheses and characterization of aryl-substituted pyrogallol[4]arenes and resorcin[4]arenes

Thirteen aryl-substituted pyrogallol[4]arene and resorcin[4]arenes structures are synthesized and characterized. The effect of the varying aryl pendent groups on π–π distance, the inward tilt of the pendent –R groups, the twist angle of the pendent –R groups, and the angle between the pendent –R groups is methodically investigated and discussed.

Anion-templated hexagonal nanotubes

Hydrogen bonding between bromide anions and a tetrahydroxytriptycene ligand was used to assemble crystalline hexagonal tubes with nanometer diameters in good yield. Use of a hexahydroxytriptycene ligand again gave hexagonal nanotubes, but containing the spontaneously-oxidised quinone-tetrahydroxy ligand. The surprisingly robust nanotubes are stable to heat, vacuum and water, and represent an unprecedented use of O-H···anion coordination to assemble complex three-dimensional structures.

A hydrogen bonded molecular capsule versus a 3D network of tripodal organopolysilanols

1,3,5-Triethylbenzene based tripodal trisilanols were synthesized. X-ray, NMR and ESI-mass spectra disclosed the first example of an organotrisilanol molecular capsule based on a 1,3,5-triethylbenzene scaffold which showed encapsulation of H₂O or halogen anions in both the crystalline and solution states.

Establishing trends based on solvent system changes in cocrystals containing pyrogallol[4]arenes and fluorescent probes rhodamine B and pyronin Y

Eight cocrystal structures containing a pyrogallol[4]arene of varying aliphatic tail lengths and either fluorescent probes rhodamine B or pyronin Y in a range of solvent systems are examined. Trends based on probe, solvent, and aliphatic tail length are investigated.

Solution structures of nanoassemblies based on pyrogallol[4]arenes

Nanoassemblies of hydrogen-bonded and metal-seamed pyrogallol[4]arenes have been shown to possess novel solution-phase geometries. Further, we have demonstrated that both guest encapsulation and structural rearrangements may be studied by solution-phase techniques such as small-angle neutron scattering (SANS) and diffusion NMR. Application of these techniques to pyrogallol[4]arene-based nanoassemblies has allowed (1) differentiation among spherical, ellipsoidal, toroidal, and tubular structures in solution, (2) determination of factors that control the preferred geometrical shape and size of the nanoassemblies, and (3) detection of small variations in metric dimensions distinguishing similarly and differently shaped nanoassemblies in a given solution. Indeed, we have shown that the solution-phase structure of such nanoassemblies is often quite different from what one would predict based on solid-state studies, a result in disagreement with the frequently made assumption that these assemblies have similar structures in the two phases. We instead have predicted solid-state architectures from solution-phase structures by combining the solution-phase analysis with solid-state magnetic and elemental analyses. Specifically, the iron-seamed C-methylpyrogallol[4]arene nanoassembly was found to be tubular in solution and predicted to be tubular in the solid state, but it was found to undergo a rearrangement from a tubular to spherical geometry in solution as a function of base concentration. The absence of metal within a tubular framework affects its stability in both solution and the solid state; however, this instability is not necessarily characteristic of hydrogen-bonded capsular entities. Even metal seaming of the capsules does not guarantee similar solid-state and solution-phase architectures. The rugby ball-shaped gallium-seamed C-butylpyrogallol[4]arene hexamer becomes toroidal on dissolution, as does the spherically shaped gallium/zinc-seamed C-butylpyrogallol[4]arene hexamer. However, the arenes are arranged differently in the two toroids, a variation that accounts for the differences in their sizes and guest encapsulation. Guest encapsulation of biotemplates, such as insulin, has demonstrated the feasibility of synthesizing nanocapsules with a volume three times that of a hexamer. The solution-phase studies have also demonstrated that the self-assembly of dimers versus hexamers can be controlled by the choice of metal, solvent, and temperature. Controlling the size of the host, nature of the metal, and identity of the guest will allow construction of targeted host-guest assemblies having potential uses as drug delivery agents, nanoscale reaction vessels, and radioimaging/radiotherapy agents. Overall, the present series of solid- and solution-phase studies has begun to pave the way toward a more complete understanding of the properties and behavior of complex supramolecular nanoassemblies.

Stereospecific synthesis of resorcin[4]arenes and pyrogallol[4]arenes in dynamic thin films

Acid catalysed condensation of resorcinol and pyrogallol with aromatic aldehydes using a microfluidic vortex fluidic device (VFD) under continuous flow conditions results in the selective formation of resorcin[4]arenes and pyrogallol[4]arenes as predominantly their C(4v) isomers. Notably C(2v) isomers and C(2h) isomers can be also prepared with the latter being converted to the C(4v) isomer when the VFD operates in confined mode.

Cocrystallization of pyrogallol[4]arenes with 1-(2-pyridylazo)-2-naphthol

Mapping the effects of various solvent systems and varying aliphatic tails lengths of cocrystals composed of pyrogallol[4]arenes and 1-(2-pyridylazo)-2-naphthol.

Illuminating host–guest cocrystallization between pyrogallol[4]arenes and the ionic liquid 1-ethyl-3-methylimidazolium ethylsulfate

Symmetry-generated packing of a cocrystal composed of c-butyl-pyrogallol[4]arene and the ionic liquid, 1-ethyl-3-methylimidazolium ethylsulfate.

Zinc-seamed pyrogallol[4]arene dimers as structural components in a two-dimensional MOF

Computational methods were used as a proof of principle in the synthesis of a two-dimensional coordination polymer constructed from zinc-seamed pyrogallol[4]arene dimeric nanocapsules and 4,4′-bipyridine.

Investigating structural alterations in pyrogallol[4]arene-pyrene nanotubular frameworks

Small-angle neutron scattering (SANS) and diffusion NMR studies are performed to investigate the stability and geometry of hydrogen-bonded pyrene-guest-containing C-hexylpyrogallol[4]arene (PgC(6) -pyrene) nanotubular frameworks in solution. In the solid state, hydrogen-bonded pyrogallol[4]arene tubes are formed; however, the scattering data for PgC(6) -pyrene assemblies in acetone are best modeled as dimeric spheres of PgC(6) with no pyrene guest. The result of diffusion NMR study also indicates the rearrangement of tubular entity into spherical framework in acetone. This is the first example of structural transformation of pyrogallol[4]arene nanotubes (guest-exo) in solution. Individual hydrogen-bonded spheres of PgC(6) exhibits a uniform radius of ca. 8.6 Å and a diffusion coefficient of 9.12 × 10(-10) m(2) s(-1) in acetone. The diffusion NMR measurements further gave, for the first time, insights into how the type of solvent (acetone vs. methanol vs. acetontitrile/D(2) O) governs the structural differences in these nanoassemblies. Solution-phase structural alteration observed for PgC(6) -pyrene gives evidence of enhanced stability of pyrogallol[4]arene nanocapsules over nanotubes.

Synthetic membrane active amphiphiles

During the past several decades, various synthetic organic compounds that form pores in bilayer membranes have been prepared and studied. These membrane active amphiphiles have also proved to be useful in affecting the transport of molecules into or through the bilayer. This article discusses the evolution of these compounds and exemplifies recent applications such as enhancement of antimicrobial activity.

Exploring the magnetic behavior of nickel-coordinated pyrogallol[4]arene nanocapsules

The magnetic behavior of nickel-seamed C-propylpyrogallol[4]arene dimeric and hexameric nanocapsular assemblies has been investigated in the solid state using a SQUID magnetometer. These dimeric and hexameric capsular entities show magnetic differentiation both in terms of moment per nanocapsule and potential antiferromagnetic interactions within individual nanocapsules. The weak antiferromagnetic behavior observed at low temperatures indicates dipolar interactions between neighboring nickel atoms; however, this effect is higher in the hexameric nickel-seamed assembly. The differences in magnetic behavior of dimer versus hexamer can be attributed to different coordination environments and metal arrangements in the two nanocapsular assemblies.