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Nishikawa K, Teranishi T, Tsuruta T, Niwa T, Morita K, Hashimoto S, Hoshino A, Kumagai M, Morimoto Y. Establishment of "Ring-Size-Divergent" Synthetic Strategy: Divergent Synthesis, Stereochemical Assignments, and Biological Activity Studies of Nerolidol-Type Sesquiterpenoids and Feroniellins. J Org Chem 2023; 88:15844-15861. [PMID: 37924303 DOI: 10.1021/acs.joc.3c01913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2023]
Abstract
Biomimetic epoxide-opening cascade cyclizations of polyepoxides enable the efficient and rapid construction of polyether skeletons. In this study, we discovered a method for switching the cyclization mode from tetrahydrofuran to tetrahydropyran (THP) formation in epoxide-opening cascades of polyepoxides. The THP formation proceeded via an epoxonium-ion intermediate by simple heating in neutral water. Next, by expanding the switching reaction, we successfully established a "ring-size-divergent" synthetic strategy that enabled the synthesis of the five-, six-, and seven-membered ether rings from identical diepoxide cyclization precursors under simple acidic or neutral conditions. The "ring-size-divergent" synthetic strategy was applied to the short divergent synthesis of nerolidol-type sesquiterpenoids and feroniellins, resulting in the revision of the proposed stereochemistry of certain natural products and the determination of all of the absolute configurations. Additionally, the anti-inflammatory activities of the synthetic samples were evaluated.
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Affiliation(s)
- Keisuke Nishikawa
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Tomonori Teranishi
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Tomoki Tsuruta
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Toshiki Niwa
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Kengo Morita
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Subaru Hashimoto
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Akihiro Hoshino
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Momochika Kumagai
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
- Faculty of Fisheries, Kagoshima University, Shimoarata, Kagoshima 890-0056, Japan
| | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
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2
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Gribble GW. Naturally Occurring Organohalogen Compounds-A Comprehensive Review. PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2023; 121:1-546. [PMID: 37488466 DOI: 10.1007/978-3-031-26629-4_1] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
The present volume is the third in a trilogy that documents naturally occurring organohalogen compounds, bringing the total number-from fewer than 25 in 1968-to approximately 8000 compounds to date. Nearly all of these natural products contain chlorine or bromine, with a few containing iodine and, fewer still, fluorine. Produced by ubiquitous marine (algae, sponges, corals, bryozoa, nudibranchs, fungi, bacteria) and terrestrial organisms (plants, fungi, bacteria, insects, higher animals) and universal abiotic processes (volcanos, forest fires, geothermal events), organohalogens pervade the global ecosystem. Newly identified extraterrestrial sources are also documented. In addition to chemical structures, biological activity, biohalogenation, biodegradation, natural function, and future outlook are presented.
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Affiliation(s)
- Gordon W Gribble
- Department of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
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3
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Nishikawa K, Taki N, Nishikibe K, Kumagai M, Morimoto Y. Total Synthesis, Revised Structure, and Cytotoxic Activities of Iubol. CHEM LETT 2022. [DOI: 10.1246/cl.220312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Affiliation(s)
- Keisuke Nishikawa
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Naoto Taki
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Kento Nishikibe
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Momochika Kumagai
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
- Faculty of Fisheries, Kagoshima University, Shimoarata, Kagoshima 890-0056, Japan
| | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, Sumiyoshi-ku, Osaka 558-8585, Japan
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4
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Nishikibe K, Nishikawa K, Kumagai M, Doe M, Morimoto Y. Asymmetric Total Syntheses, Stereostructures, and Cytotoxicities of Marine Bromotriterpenoids Aplysiol B (Laurenmariannol) and Saiyacenol A. Chem Asian J 2021; 17:e202101137. [PMID: 34704367 PMCID: PMC9299038 DOI: 10.1002/asia.202101137] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 10/26/2021] [Indexed: 11/29/2022]
Abstract
There are marine cytotoxic bromotriterpenoids, named the thyrsiferol family that are structurally characterized by some tetrahydropyran (THP) and tetrahydrofuran (THF) rings. The thyrsiferol family belongs to natural products that are often difficult to determine their stereostructures even by the current, highly advanced spectroscopic methods, especially in acyclic systems including stereogenic tetrasubstituted carbon centers. In such cases, it is effective to predict and synthesize the possible stereostructures. Herein, to elucidate ambiguous stereostructures and unassigned absolute configurations of aplysiol B, laurenmariannol, and saiyacenol A, members of the thyrsiferol family, we carried out their asymmetric chemical syntheses featuring 6‐exo and 5‐exo oxacyclizations of epoxy alcohol precursors and 6‐endo bromoetherification of a bishomoallylic alcohol. In this paper, we report total assignments of their stereostructures through their asymmetric chemical syntheses and also their preliminary cytotoxic activities against some tumor cells. These results could not have been achieved without depending on asymmetric total synthesis.
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Affiliation(s)
- Kento Nishikibe
- Department of Chemistry, Graduate School of Science, Osaka City University Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Keisuke Nishikawa
- Department of Chemistry, Graduate School of Science, Osaka City University Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Momochika Kumagai
- Department of Chemistry, Graduate School of Science, Osaka City University Sumiyoshi-ku, Osaka, 558-8585, Japan.,Faculty of Fisheries, Kagoshima University Shimoarata, Kagoshima, 8900056, Japan
| | - Matsumi Doe
- Department of Chemistry, Graduate School of Science, Osaka City University Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of Science, Osaka City University Sumiyoshi-ku, Osaka, 558-8585, Japan
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5
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Nishikawa K, Kumagai M, Matsumura K, Nishikibe K, Morimoto Y. Natural Product Synthesis Strategy Based on the Concept of Directly Constructing the Ring Skeletons from Linear Substrates. J SYN ORG CHEM JPN 2021. [DOI: 10.5059/yukigoseikyokaishi.79.197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Keisuke Nishikawa
- Department of Chemistry, Graduate School of Science, Osaka City University
| | | | | | | | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of Science, Osaka City University
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6
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Nishikawa K, Morita K, Hashimoto S, Hoshino A, Ikeuchi T, Kumagai M, Morimoto Y. Critical Switching of Cyclization Modes of Polyepoxides in Acidic Aqueous Media and Neutral Water: Synthesis and Revised Structure of a Nerolidol-Type Sesquiterpenoid. Angew Chem Int Ed Engl 2019; 58:10168-10172. [PMID: 31211481 DOI: 10.1002/anie.201906039] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Indexed: 11/12/2022]
Abstract
Biomimetic epoxide-opening cascades of polyepoxides enable the efficient and rapid construction of polyether frameworks. Herein, we show that the epoxide-opening cascade cyclization that affords tetrahydrofuran products in acidic aqueous media produces tetrahydropyran (THP) in neutral water. THP formation proceeded by simply heating polyepoxides in neutral water and followed a different cyclization mode from those observed so far. The novel cascade cyclization in H2 O was applied to the synthesis of a new nerolidol-type sesquiterpenoid, resulting in revision of the proposed structure and determination of the absolute configuration.
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Affiliation(s)
- Keisuke Nishikawa
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Kengo Morita
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Subaru Hashimoto
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Akihiro Hoshino
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Takumi Ikeuchi
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Momochika Kumagai
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan.,Japan Food Research Laboratories, Ibaraki-shi, Osaka, 567-0085, Japan
| | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka, 558-8585, Japan
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7
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Nishikawa K, Morita K, Hashimoto S, Hoshino A, Ikeuchi T, Kumagai M, Morimoto Y. Critical Switching of Cyclization Modes of Polyepoxides in Acidic Aqueous Media and Neutral Water: Synthesis and Revised Structure of a Nerolidol‐Type Sesquiterpenoid. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201906039] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Keisuke Nishikawa
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
| | - Kengo Morita
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
| | - Subaru Hashimoto
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
| | - Akihiro Hoshino
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
| | - Takumi Ikeuchi
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
| | - Momochika Kumagai
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
- Japan Food Research Laboratories Ibaraki-shi Osaka 567-0085 Japan
| | - Yoshiki Morimoto
- Department of ChemistryGraduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558-8585 Japan
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8
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Zhang YA, Yaw N, Snyder SA. General Synthetic Approach for the Laurencia Family of Natural Products Empowered by a Potentially Biomimetic Ring Expansion. J Am Chem Soc 2019; 141:7776-7788. [DOI: 10.1021/jacs.9b01088] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Affiliation(s)
- Yu-An Zhang
- Department of Chemistry, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States
| | - Natalie Yaw
- Department of Chemistry, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States
| | - Scott A. Snyder
- Department of Chemistry, University of Chicago, 5735 South Ellis Avenue, Chicago, Illinois 60637, United States
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9
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Abstract
Covering: January to December 2017This review covers the literature published in 2017 for marine natural products (MNPs), with 740 citations (723 for the period January to December 2017) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1490 in 477 papers for 2017), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included. Geographic distributions of MNPs at a phylogenetic level are reported.
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Affiliation(s)
- Anthony R Carroll
- School of Environment and Science, Griffith University, Gold Coast, Australia. and Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia
| | - Brent R Copp
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Rohan A Davis
- Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia
| | - Robert A Keyzers
- Centre for Biodiscovery, School of Chemical and Physical Sciences, Victoria University of Wellington, Wellington, New Zealand
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10
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Wakamiya Y, Ebine M, Murayama M, Omizu H, Matsumori N, Murata M, Oishi T. Synthesis and Stereochemical Revision of the C31–C67 Fragment of Amphidinol 3. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712167] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Yuma Wakamiya
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Makoto Ebine
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Mariko Murayama
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Hiroyuki Omizu
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Nobuaki Matsumori
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Michio Murata
- Department of Chemistry Graduate School of Science Osaka University 1-1 Machikeneyama, Toyonaka Osaka 560-0043 Japan
| | - Tohru Oishi
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
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11
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Wakamiya Y, Ebine M, Murayama M, Omizu H, Matsumori N, Murata M, Oishi T. Synthesis and Stereochemical Revision of the C31–C67 Fragment of Amphidinol 3. Angew Chem Int Ed Engl 2018; 57:6060-6064. [DOI: 10.1002/anie.201712167] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Revised: 03/04/2018] [Indexed: 12/22/2022]
Affiliation(s)
- Yuma Wakamiya
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Makoto Ebine
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Mariko Murayama
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Hiroyuki Omizu
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Nobuaki Matsumori
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Michio Murata
- Department of Chemistry Graduate School of Science Osaka University 1-1 Machikeneyama, Toyonaka Osaka 560-0043 Japan
| | - Tohru Oishi
- Department of Chemistry, Faculty and Graduate School of Science Kyushu University 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
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12
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Nishikawa K, Yamauchi K, Kikuchi S, Ezaki S, Koyama T, Nokubo H, Matsumura K, Kodama T, Kumagai M, Morimoto Y. Total Syntheses of Lepadiformine Marine Alkaloids with Enantiodivergency, Utilizing Hg(OTf)
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‐Catalyzed Cycloisomerization Reaction and their Cytotoxic Activities. Chemistry 2017; 23:9535-9545. [DOI: 10.1002/chem.201701475] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Keisuke Nishikawa
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Kengo Yamauchi
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Seiho Kikuchi
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Shinnosuke Ezaki
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Tomoyuki Koyama
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Haruka Nokubo
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Kunihiro Matsumura
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Takeshi Kodama
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
| | - Momochika Kumagai
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
- Japan Food Research Laboratories Ibaraki-shi Osaka 567-0085 Japan
| | - Yoshiki Morimoto
- Department of Chemistry, Graduate School of ScienceOsaka City University Sumiyoshi-ku Osaka 558–8585 Japan
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