1
|
Devi T, Mebs S, Barman DJ, Opis-Basilio A, Haumann M, Ray K. Reinvestigation of the mechanism of dioxygen activation at a Mn II(cyclam) center. J Inorg Biochem 2024; 264:112809. [PMID: 39705751 DOI: 10.1016/j.jinorgbio.2024.112809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2024] [Revised: 11/19/2024] [Accepted: 12/07/2024] [Indexed: 12/23/2024]
Abstract
This study deals with the unprecedented reactivity of a [(cyclam)MnII(OTf)2] (3-cis; OTf = CF3SO3-) with O2, which, depending on the presence or absence of a hydrogen atom donor like 1-hydroxy-2,2,6,6-tetramethyl-piperidine (TEMPO-H), selectively generates di-μ-oxo Mn(III)Mn(IV) (1) or MnIV2 (2) complexes, respectively. Both dimers have been characterized by different techniques including single-crystal X-ray diffraction, X-ray absorption spectroscopy, and electron paramagnetic resonance. Oxygenation reactions carried out with labeled 18O2 and Resonance Raman spectroscopy unambiguously show that the oxygen atoms present in the MnIVMnIII dimer originate from O2. Experimental evidences are provided for a novel method of dioxygen activation involving three Mn ions or two Mn ions and TEMPO-H to generate the bis(μ-oxo)dimanganese(IV) or bis(μ-oxo) dimanganese(III, IV) cores, respectively.
Collapse
Affiliation(s)
- Tarali Devi
- Indian Institute of Technology Hyderabad, Telangana 502284, India; Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany.
| | - Stefan Mebs
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Dibya Jyoti Barman
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany
| | - Amanda Opis-Basilio
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany
| | - Michael Haumann
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Kallol Ray
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany.
| |
Collapse
|
2
|
Shen K, Gennari M, Philouze C, Velić A, Demeshko S, Meyer F, Duboc C. Chromium-Thiolate Complex Undergoing C-S Bond Cleavage. Inorg Chem 2024; 63:9119-9128. [PMID: 38709854 DOI: 10.1021/acs.inorgchem.4c00402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
The cleavage of C-S bonds represents a crucial step in fossil fuel refinement to remove organosulfur impurities. Efforts are required to identify alternatives that can replace the energy-intensive hydrodesulfurization process currently in use. In this context, we have developed a series of bis-thiolato-ligated CrIII complexes supported by the L2- ligand (L2- = 2,2'-bipyridine-6,6'-diyl(bis(1,1-diphenylethanethiolate), one of them displaying desulfurization of one thiolate of the ligand under reducing and acidic conditions at ambient temperature and atmospheric pressure. While only 5-coordinated complexes were previously isolated by reaction of L2- with 3d metal MIII ions, both 5- and 6-coordinated mononuclear complexes have been obtained in the case of CrIII, viz., [CrIIILCl], [CrIIILCl2]-, and [CrIIILCl(CH3CN)]. The investigation of the reactivity of [CrIIILCl(CH3CN)] under reducing conditions led to a dinuclear [CrIII2L2(μ-Cl)(μ-OH)] compound and, in the presence of protons, to the mononuclear CrIII complex [CrIII(LN2S)2]+, where LN2S- is the partially desulfurized form of L2-. A desulfurization mechanism has been proposed involving the release of H2S, as evidenced experimentally.
Collapse
Affiliation(s)
- Kaiji Shen
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM Grenoble F-38000, France
| | - Marcello Gennari
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM Grenoble F-38000, France
| | | | - Ajdin Velić
- University of Göttingen, Institute of Inorganic Chemistry, Tammannstrasse 4, Göttingen D- 37077, Germany
| | - Serhiy Demeshko
- University of Göttingen, Institute of Inorganic Chemistry, Tammannstrasse 4, Göttingen D- 37077, Germany
| | - Franc Meyer
- University of Göttingen, Institute of Inorganic Chemistry, Tammannstrasse 4, Göttingen D- 37077, Germany
| | - Carole Duboc
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM Grenoble F-38000, France
| |
Collapse
|
3
|
Battistella B, Lohmiller T, Cula B, Hildebrandt P, Kuhlmann U, Dau H, Mebs S, Ray K. A New Thiolate-Bound Dimanganese Cluster as a Structural and Functional Model for Class Ib Ribonucleotide Reductases. Angew Chem Int Ed Engl 2023; 62:e202217076. [PMID: 36583430 DOI: 10.1002/anie.202217076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2022] [Revised: 12/24/2022] [Accepted: 12/29/2022] [Indexed: 12/31/2022]
Abstract
In class Ib ribonucleotide reductases (RNRs) a dimanganese(II) cluster activates superoxide (O2 ⋅- ) rather than dioxygen (O2 ), to access a high valent MnIII -O2 -MnIV species, responsible for the oxidation of tyrosine to tyrosyl radical. In a biomimetic approach, we report the synthesis of a thiolate-bound dimanganese complex [MnII 2 (BPMT)(OAc)2 ](ClO)4 (BPMT=(2,6-bis{[bis(2-pyridylmethyl)amino]methyl}-4-methylthiophenolate) (1) and its reaction with O2 ⋅- to form a [(BPMT)MnO2 Mn]2+ complex 2. Resonance Raman investigation revealed the presence of an O-O bond in 2, while EPR analysis displayed a 16-line St =1/2 signal at g=2 typically associated with a MnIII MnIV core, as detected in class Ib RNRs. Unlike all other previously reported Mn-O2 -Mn complexes, generated by O2 ⋅- activation at Mn2 centers, 2 proved to be a capable electrophilic oxidant in aldehyde deformylation and phenol oxidation reactions, rendering it one of the best structural and functional models for class Ib RNRs.
Collapse
Affiliation(s)
- Beatrice Battistella
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Thomas Lohmiller
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany.,EPR4Energy Joint Lab, Department Spins in Energy Conversion and Quantum Information Science, Helmholtz Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Str. 16, 12489, Berlin, Germany
| | - Beatrice Cula
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Peter Hildebrandt
- Institut für Chemie, Fakultät II, Technische Universität Berlin, Straße des 17. Juni 135, 10623, Berlin, Germany
| | - Uwe Kuhlmann
- Institut für Chemie, Fakultät II, Technische Universität Berlin, Straße des 17. Juni 135, 10623, Berlin, Germany
| | - Holger Dau
- Institut für Physik, Freie Universität zu Berlin, Arnimallee 14, 14195, Berlin, Germany
| | - Stefan Mebs
- Institut für Physik, Freie Universität zu Berlin, Arnimallee 14, 14195, Berlin, Germany
| | - Kallol Ray
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| |
Collapse
|
4
|
Naskar T, Jana M, Majumdar A. Binuclear manganese(II)-thiolate complexes: Synthesis, characterization and nitrite induced structural changes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
5
|
Coutard N, Musgrave CB, Moon J, Liebov NS, Nielsen RM, Goldberg JM, Li M, Jia X, Lee S, Dickie DA, Schinski WL, Wu Z, Groves JT, Goddard WA, Gunnoe TB. Manganese Catalyzed Partial Oxidation of Light Alkanes. ACS Catal 2022. [DOI: 10.1021/acscatal.2c00982] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Nathan Coutard
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Charles B. Musgrave
- Materials and Process Simulation Center, California Institute of Technology, Pasadena, California 91125, United States
| | - Jisue Moon
- Chemical Science Division, Oak Ridge National Lab, Oak Ridge, Tennessee 37831, United States
| | - Nichole S. Liebov
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Robert M. Nielsen
- Materials and Process Simulation Center, California Institute of Technology, Pasadena, California 91125, United States
| | - Jonathan M. Goldberg
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Meijun Li
- Chemical Science Division, Oak Ridge National Lab, Oak Ridge, Tennessee 37831, United States
| | - Xiaofan Jia
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | - Sungsik Lee
- X-ray Science Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Diane A. Dickie
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| | | | - Zili Wu
- Chemical Science Division, Oak Ridge National Lab, Oak Ridge, Tennessee 37831, United States
| | - John T. Groves
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - William A. Goddard
- Materials and Process Simulation Center, California Institute of Technology, Pasadena, California 91125, United States
| | - T. Brent Gunnoe
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, United States
| |
Collapse
|
6
|
Gamage EH, Ribeiro RA, Harmer CP, Canfield PC, Ozarowski A, Kovnir K. Tuning of Cr-Cr Magnetic Exchange through Chalcogenide Linkers in Cr 2 Molecular Dimers. Inorg Chem 2022; 61:6160-6174. [PMID: 35412816 DOI: 10.1021/acs.inorgchem.2c00298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A set of three Cr-dimer compounds, Cr2Q2(en)4X2 (Q: S, Se; X: Br, Cl; en: ethylenediamine), with monoatomic chalcogenide bridges have been synthesized via a single-step solvothermal route. Chalcogenide linkers mediate magnetic exchange between Cr3+ centers, while bidentate ethylenediamine ligands complete the distorted octahedral coordination of Cr centers. Unlike the compounds previously reported, none of the chalcogenide atoms are connected to extra ligands. Magnetic susceptibility studies indicate antiferromagnetic coupling between Cr3+ centers, which are moderate in Cr2Se2(en)4X2 and stronger in Cr2S2(en)4Cl2. Fitting the magnetic data requires a biquadratic exchange term. High-frequency EPR spectra showing characteristic signals due to coupled S = 1 spin states could be interpreted in terms of the "giant spin" Hamiltonian. A fourth compound, Cr2Se8(en)4, has a single diatomic Se bridge connecting the two Cr3+ centers and shows weak ferromagnetic exchange interactions. This work demonstrates the tunability in strength and type of exchange interactions between metal centers by manipulating the interatomic distances and number of bridging chalcogenide linkers.
Collapse
Affiliation(s)
- Eranga H Gamage
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, United States.,Ames Laboratory, U.S. Department of Energy, Ames, Iowa 50011, United States
| | - Raquel A Ribeiro
- Ames Laboratory, U.S. Department of Energy, Ames, Iowa 50011, United States.,Department of Physics and Astronomy, Iowa State University, Ames, Iowa 50011, United States
| | - Colin P Harmer
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, United States.,Ames Laboratory, U.S. Department of Energy, Ames, Iowa 50011, United States
| | - Paul C Canfield
- Ames Laboratory, U.S. Department of Energy, Ames, Iowa 50011, United States.,Department of Physics and Astronomy, Iowa State University, Ames, Iowa 50011, United States
| | - Andrew Ozarowski
- National High Magnetic Field Laboratory, 1800 E Paul Dirac Dr, Tallahassee, Florida 32310, United States
| | - Kirill Kovnir
- Department of Chemistry, Iowa State University, Ames, Iowa 50011, United States.,Ames Laboratory, U.S. Department of Energy, Ames, Iowa 50011, United States
| |
Collapse
|
7
|
Cook EN, Machan CW. Bioinspired mononuclear Mn complexes for O 2 activation and biologically relevant reactions. Dalton Trans 2021; 50:16871-16886. [PMID: 34730590 DOI: 10.1039/d1dt03178c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
A general interest in harnessing the oxidizing power of dioxygen (O2) continues to motivate research efforts on bioinspired and biomimetic complexes to better understand how metalloenzymes mediate these reactions. The ubiquity of Fe- and Cu-based enzymes attracts significant attention and has resulted in many noteworthy developments for abiotic systems interested in direct O2 reduction and small molecule activation. However, despite the existence of Mn-based metalloenzymes with important O2-dependent activity, there has been comparatively less focus on the development of these analogues relative to Fe- and Cu-systems. In this Perspective, we summarize important contributions to the development of bioinspired mononuclear Mn complexes for O2 activation and studies on their reactivity, emphasizing important design parameters in the primary and secondary coordination spheres and outlining mechanistic trends.
Collapse
Affiliation(s)
- Emma N Cook
- Department of Chemistry, University of Virginia, PO Box 400319, Charlottesville, VA 22904-4319, USA.
| | - Charles W Machan
- Department of Chemistry, University of Virginia, PO Box 400319, Charlottesville, VA 22904-4319, USA.
| |
Collapse
|
8
|
Gennari M, Duboc C. Bio-inspired, Multifunctional Metal-Thiolate Motif: From Electron Transfer to Sulfur Reactivity and Small-Molecule Activation. Acc Chem Res 2020; 53:2753-2761. [PMID: 33074643 DOI: 10.1021/acs.accounts.0c00555] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Sulfur-rich metalloproteins and metalloenzymes, containing strongly covalent metal-thiolate (cysteinate) or metal-sulfide bonds in their active site, are ubiquitous in nature. The metal-sulfur motif is a highly versatile tool involved in various biological processes: (i) metal storage, transport, and detoxification; (ii) electron transfer; (iii) activation of the sulfur atom to promote different types of S-based reactions including S-alkylation, S-oxygenation, S-nitrosylation, or disulfide or thiyl radicals formation; (iv) activation of small earth-abundant molecules (such as water, dioxygen, superoxide radical anion, carbon oxides, nitrous oxide, and dinitrogen).This Account describes our investigations carried out during the past 10 years on bio-inspired and biomimetic low-nuclearity complexes containing metal-thiolate bonds. The general objective of these structural, spectroscopic, electrochemical, and catalytic studies was to determine structure-properties-function correlations useful to (i) understanding the peculiar features or the mechanism of the mimicked natural systems and/or (ii) reproducing enzymatic reactivities for specific catalytic applications.By employing a unique highly preorganized N2S2-donor ligand with two thiolate functions, in combination with different first-row transition metals (Mn, Fe, Co, Ni, Cu, Zn, or V), we got access to a series of bio-inspired sulfur-rich complexes displaying a widespread spectrum of structures, properties, and functions. We isolated a dicopper(I) complex that, for the first time, mimicked concomitantly the key structural, spectroscopic, and redox features of the biological CuA center, a highly efficient electron transfer agent involved in the respiratory enzyme cytochrome c oxidase. In the field of sulfur activation, we explored (i) sulfur methylation promoted by a Zn-dithiolate complex that mimics Zn-dependent thiolate alkylation proteins and shows different selectivity compared to the Ni and Co congeners and (ii) a series of Co, Fe, and Mn complexes as the first copper-free systems able to promote thiolate/disulfide interconversion mediated by (de)coordination of halides. Concerning metal-centered reactivity, we investigated two families of metal-thiolate catalysts for small-molecule activation, especially relevant in the fields of sustainable fuel production and energy conversion: (i) two isostructural Mn and Fe dinuclear complexes that activate and reduce dioxygen selectively, either to hydrogen peroxide or water as a function of the experimental conditions; (ii) a family of dinuclear MFe (M = Ni or Fe) hydrogenase mimics active for catalytic H2 evolution both in organic solution and on modified electrodes in water.This Account thus illustrates how the versatility of thiolate ligation can support selected functions for transition metal complexes, depending on the nature of the metal, the nuclearity of the complex, the presence and type of co-ligands, the second coordination sphere effects, and the experimental conditions.
Collapse
Affiliation(s)
- Marcello Gennari
- UMR CNRS 5250, Département de Chimie Moléculaire, Univ. Grenoble Alpes, 38000 Grenoble, France
| | - Carole Duboc
- UMR CNRS 5250, Département de Chimie Moléculaire, Univ. Grenoble Alpes, 38000 Grenoble, France
| |
Collapse
|
9
|
|
10
|
Wang L, Gennari M, Cantú Reinhard FG, Padamati SK, Philouze C, Flot D, Demeshko S, Browne WR, Meyer F, de Visser SP, Duboc C. O2 Activation by Non-Heme Thiolate-Based Dinuclear Fe Complexes. Inorg Chem 2020; 59:3249-3259. [DOI: 10.1021/acs.inorgchem.9b03633] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Lianke Wang
- Institutes of Physical Science and Information Technology, Anhui University, 230601 Hefei, Anhui, P. R. China
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Marcello Gennari
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Sandeep K. Padamati
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | | | - David Flot
- ESRF European Synchrotron 71, Ave Martyrs Grenoble, 38000 Grenoble, France
| | - Serhiy Demeshko
- Institute of Inorganic Chemistry, University of Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Wesley R. Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Franc Meyer
- Institute of Inorganic Chemistry, University of Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Carole Duboc
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| |
Collapse
|
11
|
Parham JD, Wijeratne GB, Mayfield JR, Jackson TA. Steric control of dioxygen activation pathways for Mn II complexes supported by pentadentate, amide-containing ligands. Dalton Trans 2019; 48:13034-13045. [PMID: 31406966 PMCID: PMC6733413 DOI: 10.1039/c9dt02682g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Dioxygen activation at manganese centers is well known in nature, but synthetic manganese systems capable of utilizing O2 as an oxidant are relatively uncommon. These present investigations probe the dioxygen activation pathways of two mononuclear MnII complexes supported by pentacoordinate amide-containing ligands, [MnII(dpaq)](OTf) and the sterically modified [MnII(dpaq2Me)](OTf). Dioxygen titration experiments demonstrate that [MnII(dpaq)](OTf) reacts with O2 to form [MnIII(OH)(dpaq)](OTf) according to a 4 : 1 Mn : O2 stoichiometry. This stoichiometry is consistent with a pathway involving comproportionation between a MnIV-oxo species and residual MnII complex to form a (μ-oxo)dimanganese(iii,iii) species that is hydrolyzed by water to give the MnIII-hydroxo product. In contrast, the sterically modified [MnII(dpaq2Me)](OTf) complex was found to react with O2 according to a 2 : 1 Mn : O2 stoichiometry. This stoichiometry is indicative of a pathway in which a MnIV-oxo intermediate abstracts a hydrogen atom from solvent instead of undergoing comproportionation with the MnII starting complex. Isotopic labeling experiments, in which the oxygenation of the MnII complexes was carried out in deuterated solvent, supported this change in pathway. The oxygenation of [MnII(dpaq)](OTf) did not result in any deuterium incorporation in the MnIII-hydroxo product, while the oxygenation of [MnII(dpaq2Me)](OTf) in d3-MeCN showed [MnIII(OD)(dpaq2Me)]+ formation. Taken together, these observations highlight the use of steric effects as a means to select which intermediates form along dioxygen activation pathways.
Collapse
Affiliation(s)
- Joshua D Parham
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Gayan B Wijeratne
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Jaycee R Mayfield
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| | - Timothy A Jackson
- Department of Chemistry and Center for Environmentally Beneficial Catalysis, University of Kansas, Lawrence, Kansas 66045, USA.
| |
Collapse
|
12
|
Barman P, Cantú Reinhard FG, Bagha UK, Kumar D, Sastri CV, de Visser SP. Hydrogen by Deuterium Substitution in an Aldehyde Tunes the Regioselectivity by a Nonheme Manganese(III)-Peroxo Complex. Angew Chem Int Ed Engl 2019; 58:10639-10643. [PMID: 31108009 DOI: 10.1002/anie.201905416] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Indexed: 12/31/2022]
Abstract
Mononuclear nonheme MnIII -peroxo complexes are important intermediates in biology, and take part in oxygen activation by photosystem II. Herein, we present work on two isomeric biomimetic side-on MnIII -peroxo intermediates with bispidine ligand system and reactivity patterns with aldehydes. The complexes are characterized with UV/Vis and mass spectrometric techniques and reaction rates with cyclohexane carboxaldehyde (CCA) are measured. The reaction gives an unusual regioselectivity switch from aliphatic to aldehyde hydrogen atom abstraction upon deuteration of the substrate, leading to the corresponding carboxylic acid product for the latter, while the former gives a deformylation reaction. Mechanistic details are established from kinetic isotope effect studies and density functional theory calculations. Thus, replacement of C-H by C-D raises the hydrogen atom abstraction barriers and enables a regioselectivity switch to a competitive pathway that is slightly higher in energy.
Collapse
Affiliation(s)
- Prasenjit Barman
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India
| | - Fabián G Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Umesh Kumar Bagha
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India
| | - Devesh Kumar
- Department of Physics, School of Physical and Decision Sciences, Babasaheb Bhimrao Ambedkar University, Lucknow, 226025, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India
| | - Sam P de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| |
Collapse
|
13
|
Barman P, Cantú Reinhard FG, Bagha UK, Kumar D, Sastri CV, de Visser SP. Hydrogen by Deuterium Substitution in an Aldehyde Tunes the Regioselectivity by a Nonheme Manganese(III)–Peroxo Complex. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201905416] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Prasenjit Barman
- Department of ChemistryIndian Institute of Technology Guwahati Guwahati Assam 781039 India
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical ScienceThe University of Manchester 131 Princess Street Manchester M1 7DN UK
| | - Umesh Kumar Bagha
- Department of ChemistryIndian Institute of Technology Guwahati Guwahati Assam 781039 India
| | - Devesh Kumar
- Department of PhysicsSchool of Physical and Decision SciencesBabasaheb Bhimrao Ambedkar University Lucknow 226025 India
| | - Chivukula V. Sastri
- Department of ChemistryIndian Institute of Technology Guwahati Guwahati Assam 781039 India
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical ScienceThe University of Manchester 131 Princess Street Manchester M1 7DN UK
| |
Collapse
|
14
|
Wang L, Gennari M, Cantú Reinhard FG, Gutiérrez J, Morozan A, Philouze C, Demeshko S, Artero V, Meyer F, de Visser SP, Duboc C. A Non-Heme Diiron Complex for (Electro)catalytic Reduction of Dioxygen: Tuning the Selectivity through Electron Delivery. J Am Chem Soc 2019; 141:8244-8253. [DOI: 10.1021/jacs.9b02011] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Lianke Wang
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Marcello Gennari
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Javier Gutiérrez
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Adina Morozan
- Université Grenoble Alpes, CNRS, CEA, Laboratoire de Chimie et
Biologie des Métaux, F-38000 Grenoble, France
| | | | - Serhiy Demeshko
- Institut für Anorganische Chemie, Universität Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Vincent Artero
- Université Grenoble Alpes, CNRS, CEA, Laboratoire de Chimie et
Biologie des Métaux, F-38000 Grenoble, France
| | - Franc Meyer
- Institut für Anorganische Chemie, Universität Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Carole Duboc
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| |
Collapse
|
15
|
|
16
|
Magherusan AM, Kal S, Nelis DN, Doyle LM, Farquhar ER, Que L, McDonald AR. A Mn II Mn III -Peroxide Complex Capable of Aldehyde Deformylation. Angew Chem Int Ed Engl 2019; 58:5718-5722. [PMID: 30830996 DOI: 10.1002/anie.201900717] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2019] [Revised: 02/27/2019] [Indexed: 11/07/2022]
Abstract
Ribonucleotide reductases (RNRs) are essential enzymes required for DNA synthesis. In class Ib Mn2 RNRs superoxide (O2 .- ) was postulated to react with the MnII 2 core to yield a MnII MnIII -peroxide moiety. The reactivity of complex 1 ([MnII 2 (O2 CCH3 )2 (BPMP)](ClO4 ), where HBPMP=2,6-bis{[(bis(2-pyridylmethyl)amino]methyl}-4-methylphenol) towards O2 .- was investigated at -90 °C, generating a metastable species, 2. The electronic absorption spectrum of 2 displayed features (λmax =440, 590 nm) characteristic of a MnII MnIII -peroxide species, representing just the second example of such. Electron paramagnetic resonance and X-ray absorption spectroscopies, and mass spectrometry supported the formulation of 2 as a MnII MnIII -peroxide complex. Unlike all other previously reported Mn2 -peroxides, which were unreactive, 2 proved to be a capable oxidant in aldehyde deformylation. Our studies provide insight into the mechanism of O2 -activation in Class Ib Mn2 RNRs, and the highly reactive intermediates in their catalytic cycle.
Collapse
Affiliation(s)
- Adriana M Magherusan
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| | - Subhasree Kal
- Department of Chemistry and Centre for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. SE, Minneapolis, MN, 55455, USA
| | - Daniel N Nelis
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| | - Lorna M Doyle
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| | - Erik R Farquhar
- Case Western Reserve University Centre for Synchrotron Biosciences, National Synchrotron Light Source II, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Lawrence Que
- Department of Chemistry and Centre for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. SE, Minneapolis, MN, 55455, USA
| | - Aidan R McDonald
- School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland
| |
Collapse
|
17
|
Liu Y, Bergès J, Zaid Y, Chahdi FO, Van Der Lee A, Harakat D, Clot E, Jaroschik F, Taillefer M. Aerobic and Ligand-Free Manganese-Catalyzed Homocoupling of Arenes or Aryl Halides via in Situ Formation of Aryllithiums. J Org Chem 2019; 84:4413-4420. [PMID: 30665303 DOI: 10.1021/acs.joc.8b02834] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Ligand-free manganese-catalyzed homocoupling of arenes or aryl halides can be carried out under aerobic conditions via the in situ formation of the corresponding aryllithiums. A wide range of biaryls and derivatives has been obtained, and a mechanism involving monomeric manganese-oxo complexes has been proposed on the basis of DFT calculations.
Collapse
Affiliation(s)
- Yujia Liu
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France
| | - Julien Bergès
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France
| | - Yassir Zaid
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France.,Laboratoire Chimie Organique Appliquée LCOA , Faculté des Sciences et Techniques , Fès 30000 , Morocco
| | - Fouad Ouazzani Chahdi
- Laboratoire Chimie Organique Appliquée LCOA , Faculté des Sciences et Techniques , Fès 30000 , Morocco
| | - Arie Van Der Lee
- Institut Européen des Membranes, ENSCM , Université de Montpellier , UMR 5635 CNRS, Montpellier 34095 , France
| | - Dominique Harakat
- Institut de Chimie Moléculaire de Reims , Université de Reims , UMR 7312 CNRS, BP 1039, Reims 51687 , France
| | - Eric Clot
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France
| | - Florian Jaroschik
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France
| | - Marc Taillefer
- Institut Charles Gerhardt Montpellier , Université de Montpellier , UMR 5253 CNRS, ENSCM, 8 rue de l'Ecole Normale , Montpellier 34296 , France
| |
Collapse
|
18
|
Wang F, Xia C, de Visser SP, Wang Y. How Does the Oxidation State of Palladium Surfaces Affect the Reactivity and Selectivity of Direct Synthesis of Hydrogen Peroxide from Hydrogen and Oxygen Gases? A Density Functional Study. J Am Chem Soc 2019; 141:901-910. [PMID: 30561995 DOI: 10.1021/jacs.8b10281] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Direct synthesis of H2O2 from H2 and O2 is an environmentally benign and atom economic process and as such is the ideal pathway in catalysis. However, currently no low-cost pathway of this kind of catalysis exists, although it would be an attractive alternative strategy to the common industrial anthraquinone method for H2O2 production. Metal-based catalysts are widely employed in such a direct synthesis process but often need to be oxidized, alloyed, or supplied with additives to make them selective. To understand the metal-oxidation state in heterogeneous catalysis, we studied the selective oxidation of hydrogen by molecular oxygen on Pd(111) and PdO(101) surfaces, leading to either H2O2 or H2O products. Our results demonstrate, for the first time, that the oxidized PdO(101) surface clearly shows better performance and selectivity, as compared to the reduced Pd(111) one. The activation barrier on the oxidized Pd surface is ca. 0.2 eV lower than the one on the reduced Pd surface. On the oxidized surface, the H2O2 synthesis route is preferred, while, on the reduced surface, the H2O route is predominant. The decomposition of H2O2 is also greatly inhibited on the oxidized surface. We analyzed the different pathways in detail through thermochemical cycles, which establishes that the oxidized surface shows weaker adsorption ability toward the reagents O2 and H2, the key intermediate OOH, and also the product H2O2 in comparison with the Pd(111) surface, which we believe affect the selectivity. The work presented here clearly shows that the oxidation state of metal surfaces is one of the most important factors that tunes the catalysis of a chemical reaction and can affect the selectivity and reaction patterns dramatically.
Collapse
Affiliation(s)
- Fang Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP , Lanzhou Institute of Chemical Physics (LICP) , Chinese Academy of Sciences, Lanzhou 730000 , P. R. China
| | - Chungu Xia
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP , Lanzhou Institute of Chemical Physics (LICP) , Chinese Academy of Sciences, Lanzhou 730000 , P. R. China
| | - Sam P de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science , The University of Manchester , 131 Princess Street , Manchester M1 7DN , United Kingdom
| | - Yong Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP , Lanzhou Institute of Chemical Physics (LICP) , Chinese Academy of Sciences, Lanzhou 730000 , P. R. China.,Institute of Drug Discovery Technology , Ningbo University , Ningbo 315211 , P. R. China
| |
Collapse
|
19
|
Khan FST, Shah SJ, Bhowmik S, Reinhard FGC, Sainna MA, de Visser SP, Rath SP. Equatorial ligand plane perturbations lead to a spin-state change in an iron(iii) porphyrin dimer. Dalton Trans 2019; 48:6353-6357. [DOI: 10.1039/c9dt01182j] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A complete reversal of the spin state of iron(iii) is observed upon a small change to the diporphyrin bridge from ethane to ethene by keeping all other factors intact.
Collapse
Affiliation(s)
| | - Syed Jehanger Shah
- Department of Chemistry
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
| | - Susovan Bhowmik
- Department of Chemistry
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
| | - Fabián G. Cantú Reinhard
- The Manchester Institute of Biotechnology and the School of Chemical Engineering and Analytical Science
- The University of Manchester
- Manchester M1 7DN
- UK
| | - Mala A. Sainna
- The Manchester Institute of Biotechnology and the School of Chemical Engineering and Analytical Science
- The University of Manchester
- Manchester M1 7DN
- UK
| | - Sam P. de Visser
- The Manchester Institute of Biotechnology and the School of Chemical Engineering and Analytical Science
- The University of Manchester
- Manchester M1 7DN
- UK
| | - Sankar Prasad Rath
- Department of Chemistry
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
| |
Collapse
|
20
|
Wang L, Cantú Reinhard FG, Philouze C, Demeshko S, de Visser SP, Meyer F, Gennari M, Duboc C. Solvent‐ and Halide‐Induced (Inter)conversion between Iron(II)‐Disulfide and Iron(III)‐Thiolate Complexes. Chemistry 2018; 24:11973-11982. [DOI: 10.1002/chem.201801377] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2018] [Indexed: 02/01/2023]
Affiliation(s)
- Lianke Wang
- Université Grenoble AlpesUMR CNRS 5250Département de Chimie Moléculaire 38000 Grenoble France
| | - Fabián G. Cantú Reinhard
- Manchester Institute of BiotechnologySchool of Chemical Engineering and Analytical ScienceThe University of Manchester 131 Princess Street Manchester M1 7DN United Kingdom
| | - Christian Philouze
- Université Grenoble AlpesUMR CNRS 5250Département de Chimie Moléculaire 38000 Grenoble France
| | - Serhiy Demeshko
- Institut für Anorganische ChemieUniversität Göttingen Tammannstrasse 4 D-37077 Göttingen Germany
| | - Sam P. de Visser
- Manchester Institute of BiotechnologySchool of Chemical Engineering and Analytical ScienceThe University of Manchester 131 Princess Street Manchester M1 7DN United Kingdom
| | - Franc Meyer
- Institut für Anorganische ChemieUniversität Göttingen Tammannstrasse 4 D-37077 Göttingen Germany
| | - Marcello Gennari
- Université Grenoble AlpesUMR CNRS 5250Département de Chimie Moléculaire 38000 Grenoble France
| | - Carole Duboc
- Université Grenoble AlpesUMR CNRS 5250Département de Chimie Moléculaire 38000 Grenoble France
| |
Collapse
|
21
|
|
22
|
Kang Y, Wang F, Reinhard FGC, Xia C, de Visser SP, Wang Y. Can Manganese(III)-Iodosylarene Act as an Oxidant Alongside High-Valent Manganese(V)-Oxo Complexes? ChemistrySelect 2018. [DOI: 10.1002/slct.201800678] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Yiran Kang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 China
- University of Chinese Academy of Sciences; Beijing 100049 China
| | - Fang Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 China
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science; The University of Manchester; 131 Princess Street Manchester M1 7DN United Kingdom
| | - Chungu Xia
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 China
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science; The University of Manchester; 131 Princess Street Manchester M1 7DN United Kingdom
| | - Yong Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 China
| |
Collapse
|
23
|
Merlini ML, Britovsek GJP, Swart M, Belanzoni P. Understanding the Catalase-Like Activity of a Bioinspired Manganese(II) Complex with a Pentadentate NSNSN Ligand Framework. A Computational Insight into the Mechanism. ACS Catal 2018. [DOI: 10.1021/acscatal.7b03559] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Maria Letizia Merlini
- Laboratoire de Chimie et Biochimie Computationnelles, Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL), Av. F.-A. Forel 2, CH-1015 Lausanne, Switzerland
| | - George J. P. Britovsek
- Department of Chemistry, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
| | - Marcel Swart
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Facultat de Ciències, 17003 Girona, Spain
- Institució Catalana de Recerca i Estudis Avançats ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain
| | - Paola Belanzoni
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, Via Elce di Sotto 8, 06123 Perugia, Italy
- Istituto di Scienze e Tecnologie Molecolari del CNR CNR-ISTM, c/o Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, via Elce di Sotto 8, 06123 Perugia, Italy
- Consortium for Computational Molecular and Materials Sciences (CMS)2, via Elce di Sotto 8, 06123 Perugia, Italy
| |
Collapse
|
24
|
Spirkl S, Grzywa M, Volkmer D. Synthesis and characterization of a flexible metal organic framework generated from MnIII and the 4,4′-bipyrazolate-ligand. Dalton Trans 2018; 47:8779-8786. [DOI: 10.1039/c8dt01185k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis and crystal structure of a novel metal organic framework, constructed from MnIII, the 4,4′-Bipyrazolate (BPZ) ligand and bridging hydroxyl groups is presented in this work.
Collapse
Affiliation(s)
- S. Spirkl
- University of Augsburg
- Institute of Physics
- Chair of Solid State and Materials Chemistry
- Universitätsstrasse 1
- 86159 Augsburg
| | - M. Grzywa
- University of Augsburg
- Institute of Physics
- Chair of Solid State and Materials Chemistry
- Universitätsstrasse 1
- 86159 Augsburg
| | - D. Volkmer
- University of Augsburg
- Institute of Physics
- Chair of Solid State and Materials Chemistry
- Universitätsstrasse 1
- 86159 Augsburg
| |
Collapse
|
25
|
Cantú Reinhard FG, Barman P, Mukherjee G, Kumar J, Kumar D, Kumar D, Sastri CV, de Visser SP. Keto-Enol Tautomerization Triggers an Electrophilic Aldehyde Deformylation Reaction by a Nonheme Manganese(III)-Peroxo Complex. J Am Chem Soc 2017; 139:18328-18338. [PMID: 29148746 DOI: 10.1021/jacs.7b10033] [Citation(s) in RCA: 66] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Oxygen atom transfer by high-valent enzymatic intermediates remains an enigma in chemical catalysis. In particular, manganese is an important first-row metal involved in key biochemical processes, including the biosynthesis of molecular oxygen (through the photosystem II complex) and biodegradation of toxic superoxide to hydrogen peroxide by superoxide dismutase. Biomimetic models of these biological systems have been developed to gain understanding on the structure and properties of short-lived intermediates but also with the aim to create environmentally benign oxidants. In this work, we report a combined spectroscopy, kinetics and computational study on aldehyde deformylation by two side-on manganese(III)-peroxo complexes with bispidine ligands. Both manganese(III)-peroxo complexes are characterized by UV-vis and mass spectrometry techniques, and their reactivity patterns with aldehydes was investigated. We find a novel mechanism for the reaction that is initiated by a hydrogen atom abstraction reaction, which enables a keto-enol tautomerization in the substrate. This is an essential step in the mechanism that makes an electrophilic attack on the olefin bond possible as the attack on the aldehyde carbonyl is too high in energy. Kinetics studies determine a large kinetic isotope effect for the replacement of the transferring hydrogen atom by deuterium, while replacing the transferring hydrogen atom by a methyl group makes the substrate inactive and hence confirm the hypothesized mechanism. Our new mechanism is confirmed with density functional theory modeling on the full mechanism and rationalized through valence bond and thermochemical cycles. Our unprecedented new mechanism may have relevance to biological and biomimetic chemistry processes in general and gives insight into the reactivity patterns of metal-peroxo and metal-hydroperoxo intermediates in general.
Collapse
Affiliation(s)
- Fabián G Cantú Reinhard
- The Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester , 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Prasenjit Barman
- Department of Chemistry, Indian Institute of Technology Guwahati 781039, Assam, India
| | - Gourab Mukherjee
- Department of Chemistry, Indian Institute of Technology Guwahati 781039, Assam, India
| | - Jitendra Kumar
- Department of Applied Physics, School for Physical Sciences, Babasaheb Bhimrao Ambedkar University , Lucknow 226025, UP, India
| | - Deep Kumar
- Department of Applied Physics, School for Physical Sciences, Babasaheb Bhimrao Ambedkar University , Lucknow 226025, UP, India
| | - Devesh Kumar
- Department of Applied Physics, School for Physical Sciences, Babasaheb Bhimrao Ambedkar University , Lucknow 226025, UP, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology Guwahati 781039, Assam, India
| | - Sam P de Visser
- The Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester , 131 Princess Street, Manchester M1 7DN, United Kingdom
| |
Collapse
|
26
|
Timmins A, de Visser SP. How Are Substrate Binding and Catalysis Affected by Mutating Glu 127 and Arg 161 in Prolyl-4-hydroxylase? A QM/MM and MD Study. Front Chem 2017; 5:94. [PMID: 29170737 PMCID: PMC5684110 DOI: 10.3389/fchem.2017.00094] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2017] [Accepted: 10/24/2017] [Indexed: 11/13/2022] Open
Abstract
Prolyl-4-hydroxylase is a vital enzyme for human physiology involved in the biosynthesis of 4-hydroxyproline, an essential component for collagen formation. The enzyme performs a unique stereo- and regioselective hydroxylation at the C4 position of proline despite the fact that the C5 hydrogen atoms should be thermodynamically easier to abstract. To gain insight into the mechanism and find the origin of this regioselectivity, we have done a quantum mechanics/molecular mechanics (QM/MM) study on wildtype and mutant structures. In a previous study (Timmins et al., 2017) we identified several active site residues critical for substrate binding and positioning. In particular, the Glu127 and Arg161 were shown to form multiple hydrogen bonding and ion-dipole interactions with substrate and could thereby affect the regio- and stereoselectivity of the reaction. In this work, we decided to test that hypothesis and report a QM/MM and molecular dynamics (MD) study on prolyl-4-hydroxylase and several active site mutants where Glu127 or Arg161 are mutated for Asp, Gln, or Lys. Thus, the R161D and R161Q mutants give very high barriers for hydrogen atom abstraction from any proline C-H bond and therefore will be inactive. The R161K mutant, by contrast, sees the regio- and stereoselectivity of the reaction change but still is expected to hydroxylate proline at room temperature. By contrast, the Glu127 mutants E127D and E127Q show possible changes in regioselectivity with the former being more probable to react compared to the latter.
Collapse
Affiliation(s)
| | - Sam P. de Visser
- School of Chemical Engineering and Analytical Science, Manchester Institute of Biotechnology, The University of Manchester, Manchester, United Kingdom
| |
Collapse
|
27
|
Lee CM, Wu WY, Chiang MH, Bohle DS, Lee GH. Generation of a Mn(IV)–Peroxo or Mn(III)–Oxo–Mn(III) Species upon Oxygenation of Mono- and Binuclear Thiolate-Ligated Mn(II) Complexes. Inorg Chem 2017; 56:10559-10569. [DOI: 10.1021/acs.inorgchem.7b01513] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Chien-Ming Lee
- Department of Applied
Science, National Taitung University, Taitung 950, Taiwan
| | - Wun-Yan Wu
- Department of Applied
Science, National Taitung University, Taitung 950, Taiwan
| | | | - D. Scott Bohle
- Department
of Chemistry, McGill University, Montreal, Quebec H3A 0B8, Canada
| | - Gene-Hsiang Lee
- Instrumentation
Center, National Taiwan University, Taipei 107, Taiwan
| |
Collapse
|