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Rodríguez-Molina M, Galicia-Badillo D, Cetina-Mancilla E, Cárdenas J, Olvera LI, Toscano RA, Rodríguez-Molina B, Zolotukhin MG. 9-Trifluoromethylxanthenediols: Synthesis and Supramolecular Motifs. ACS OMEGA 2022; 7:13520-13528. [PMID: 35559143 PMCID: PMC9088779 DOI: 10.1021/acsomega.1c06635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 03/31/2022] [Indexed: 06/15/2023]
Abstract
The synthesis of four derivatives and the single-crystal X-ray structures of six 9-trifluoromethylxanthenediols (TFXdiols) I-VI are analyzed in this work. These compounds were obtained through superacid-catalyzed condensation of dihydroxybenzenes with 1,1,1-trifluoroacetone or 2,2,2-trifluoroacetophenone. The title molecules have a convex molecular structure due to their three fused rings of the xanthene moiety. We have found that, similar to resorcinol, the configuration of the hydroxyl groups is of great relevance for the crystal packing favoring either interactions above and below their molecular plane or lateral interactions that create layers. Considering that reports of TFXdiols are very scarce, our findings contribute to a better understanding of the molecular conformation and intermolecular interactions in their crystal structures. A similar analysis was extended to a fortuitous cocrystal obtained between 9-trifluoromethyl-9-(4'-fluorophenyl)-xanthenediol and 1,4-dihydroxybenzene, showing that these structures might be used to obtain cocrystals in the future.
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Affiliation(s)
- Manuel Rodríguez-Molina
- Instituto
de Investigaciones en Materiales, Universidad Nacional Autónoma
de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Dazaet Galicia-Badillo
- Instituto
de Química, Universidad Nacional Autónoma de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Enoc Cetina-Mancilla
- Instituto
de Investigaciones en Materiales, Universidad Nacional Autónoma
de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Jorge Cárdenas
- Instituto
de Química, Universidad Nacional Autónoma de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Lilian I. Olvera
- Instituto
de Investigaciones en Materiales, Universidad Nacional Autónoma
de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Rubén A. Toscano
- Instituto
de Química, Universidad Nacional Autónoma de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Braulio Rodríguez-Molina
- Instituto
de Química, Universidad Nacional Autónoma de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
| | - Mikhail G. Zolotukhin
- Instituto
de Investigaciones en Materiales, Universidad Nacional Autónoma
de México, Av. Universidad, CU, Coyoacán, 04510 Ciudad de México, México
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Yamazaki T, Taketsugi M, Kawasaki-Takasuka T, Agou T, Kubota T. Construction of CF 3-Containing Quaternary Chiral Centers via Michael Addition Reactions. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20210136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Takashi Yamazaki
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei, Tokyo 184-8588, Japan
| | - Masahito Taketsugi
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei, Tokyo 184-8588, Japan
| | - Tomoko Kawasaki-Takasuka
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei, Tokyo 184-8588, Japan
| | - Tomohiro Agou
- Department of Quantum Beam Science, Graduate School of Science and Engineering, Ibaraki University, 4-12-1 Nakanarusawa, Hitachi, Ibaraki 316-8511, Japan
| | - Toshio Kubota
- Department of Quantum Beam Science, Graduate School of Science and Engineering, Ibaraki University, 4-12-1 Nakanarusawa, Hitachi, Ibaraki 316-8511, Japan
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Modification of N-terminal α-amine of proteins via biomimetic ortho-quinone-mediated oxidation. Nat Commun 2021; 12:2257. [PMID: 33859198 PMCID: PMC8050078 DOI: 10.1038/s41467-021-22654-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 03/09/2021] [Indexed: 11/22/2022] Open
Abstract
Naturally abundant quinones are important molecules, which play essential roles in various biological processes due to their reduction potential. In contrast to their universality, the investigation of reactions between quinones and proteins remains sparse. Herein, we report the development of a convenient strategy to protein modification via a biomimetic quinone-mediated oxidation at the N-terminus. By exploiting unique reactivity of an ortho-quinone reagent, the α-amine of protein N-terminus is oxidized to generate aldo or keto handle for orthogonal conjugation. The applications have been demonstrated using a range of proteins, including myoglobin, ubiquitin and small ubiquitin-related modifier 2 (SUMO2). The effect of this method is further highlighted via the preparation of a series of 17 macrophage inflammatory protein 1β (MIP-1β) analogs, followed by preliminary anti-HIV activity and cell viability assays, respectively. This method offers an efficient and complementary approach to existing strategies for N-terminal modification of proteins. Methods for selective modification of the N-terminus of proteins are of high interest, but mostly require specific amino acid residues. Here, the authors report a selective and fast method for N-terminal modification of proteins based on quinone-mediated oxidation of the alpha-amine to aldehyde or ketone, and apply it to diverse proteins.
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Varlet T, Masson G. Enamides and dienamides in phosphoric acid-catalysed enantioselective cycloadditions for the synthesis of chiral amines. Chem Commun (Camb) 2021; 57:4089-4105. [DOI: 10.1039/d1cc00590a] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
This feature article describes how enamides and dienamides can participate in chiral phosphoric acid catalyzed enantioselective cycloadditions to prepare a wide range of cyclic amines.
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Affiliation(s)
- Thomas Varlet
- Université Paris-Saclay
- Institut de Chimie des Substances Naturelles
- ICSN-CNRS UPR 2301
- 91198 Gif-sur-Yvette
- France
| | - Géraldine Masson
- Université Paris-Saclay
- Institut de Chimie des Substances Naturelles
- ICSN-CNRS UPR 2301
- 91198 Gif-sur-Yvette
- France
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Iashin V, Berta D, Chernichenko K, Nieger M, Moslova K, Pápai I, Repo T. Metal-Free C-H Borylation of N-Heteroarenes by Boron Trifluoride. Chemistry 2020; 26:13873-13879. [PMID: 32478432 PMCID: PMC7702085 DOI: 10.1002/chem.202001436] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 05/28/2020] [Indexed: 01/08/2023]
Abstract
Organoboron compounds are essential reagents in modern C-C coupling reactions. Their synthesis via catalytic C-H borylation by main group elements is emerging as a powerful tool alternative to transition metal based catalysis. Herein, a straightforward metal-free synthesis of aryldifluoroboranes from BF3 and heteroarenes is reported. The reaction is assisted by sterically hindered amines and catalytic amounts of thioureas. According to computational studies the reaction proceeds via frustrated Lewis pair (FLP) mechanism. The obtained aryldifluoroboranes are further stabilized against destructive protodeborylation by converting them to the corresponding air stable tetramethylammonium organotrifluoroborates.
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Affiliation(s)
- Vladimir Iashin
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio, 100014HelsinkiFinland
| | - Dénes Berta
- Institute of Organic ChemistryResearch Centre for Natural SciencesMagyar tudósok körútja 21117BudapestHungary
| | - Konstantin Chernichenko
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio, 100014HelsinkiFinland
- Present address: API Small Molecule DevelopmentJanssen Pharmaceutica N.V.Turnhoutseweg 302340BeerseBelgium
| | - Martin Nieger
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio, 100014HelsinkiFinland
| | - Karina Moslova
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio, 100014HelsinkiFinland
| | - Imre Pápai
- Institute of Organic ChemistryResearch Centre for Natural SciencesMagyar tudósok körútja 21117BudapestHungary
| | - Timo Repo
- Department of ChemistryUniversity of HelsinkiA. I. Virtasen aukio, 100014HelsinkiFinland
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Varlet T, Gelis C, Retailleau P, Bernadat G, Neuville L, Masson G. Enantioselective Redox‐Divergent Chiral Phosphoric Acid Catalyzed Quinone Diels–Alder Reactions. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000838] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Thomas Varlet
- Institut de Chimie des Substances Naturelles CNRS Univ. Paris-Saclay 1 Avenue de la Terrasse 91198 Gif-sur-Yvette Cedex France
| | - Coralie Gelis
- Institut de Chimie des Substances Naturelles CNRS Univ. Paris-Saclay 1 Avenue de la Terrasse 91198 Gif-sur-Yvette Cedex France
| | - Pascal Retailleau
- Institut de Chimie des Substances Naturelles CNRS Univ. Paris-Saclay 1 Avenue de la Terrasse 91198 Gif-sur-Yvette Cedex France
| | - Guillaume Bernadat
- Laboratoire Chimie Thérapeutique Faculté de Pharmacie—Biocis 8076 LabEx LERMIT 5, rue J.B Clément 92296 Châtenay Malabry France
| | - Luc Neuville
- Institut de Chimie des Substances Naturelles CNRS Univ. Paris-Saclay 1 Avenue de la Terrasse 91198 Gif-sur-Yvette Cedex France
| | - Géraldine Masson
- Institut de Chimie des Substances Naturelles CNRS Univ. Paris-Saclay 1 Avenue de la Terrasse 91198 Gif-sur-Yvette Cedex France
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Varlet T, Gelis C, Retailleau P, Bernadat G, Neuville L, Masson G. Enantioselective Redox-Divergent Chiral Phosphoric Acid Catalyzed Quinone Diels-Alder Reactions. Angew Chem Int Ed Engl 2020; 59:8491-8496. [PMID: 32112662 DOI: 10.1002/anie.202000838] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Indexed: 01/06/2023]
Abstract
An efficient enantioselective construction of tetrahydronaphthalene-1,4-diones as well as dihydronaphthalene-1,4-diols by a chiral phosphoric acid catalyzed quinone Diels-Alder reaction with dienecarbamates is reported. The nature of the protecting group on the diene is key to the success of achieving high enantioselectivity. The divergent "redox" selectivity is controlled by using an adequate amount of quinones. Reversible redox switching without erosion of enantioselectivity was possible from individual redox isomers.
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Affiliation(s)
- Thomas Varlet
- Institut de Chimie des Substances Naturelles CNRS, Univ. Paris-Saclay, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette Cedex, France
| | - Coralie Gelis
- Institut de Chimie des Substances Naturelles CNRS, Univ. Paris-Saclay, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette Cedex, France
| | - Pascal Retailleau
- Institut de Chimie des Substances Naturelles CNRS, Univ. Paris-Saclay, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette Cedex, France
| | - Guillaume Bernadat
- Laboratoire Chimie Thérapeutique, Faculté de Pharmacie-Biocis 8076, LabEx LERMIT, 5, rue J.B Clément, 92296, Châtenay Malabry, France
| | - Luc Neuville
- Institut de Chimie des Substances Naturelles CNRS, Univ. Paris-Saclay, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette Cedex, France
| | - Géraldine Masson
- Institut de Chimie des Substances Naturelles CNRS, Univ. Paris-Saclay, 1 Avenue de la Terrasse, 91198, Gif-sur-Yvette Cedex, France
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Engwerda AHJ, Meekes H, Bickelhaupt FM, Rutjes FPJT, Vlieg E. Racemization and Deracemization through Intermolecular Redox Behaviour. Chemistry 2019; 25:9639-9642. [DOI: 10.1002/chem.201902438] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Indexed: 11/06/2022]
Affiliation(s)
- Anthonius H. J. Engwerda
- Institute for Molecules and MaterialsRadboud University Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Hugo Meekes
- Institute for Molecules and MaterialsRadboud University Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - F. Matthias Bickelhaupt
- Institute for Molecules and MaterialsRadboud University Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
- Department of Theoretical Chemistry and Amsterdam Center, for Multiscale ModelingVU University De Boelelaan 1083 1081 HV Amsterdam The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and MaterialsRadboud University Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
| | - Elias Vlieg
- Institute for Molecules and MaterialsRadboud University Heyendaalseweg 135 6525 AJ Nijmegen The Netherlands
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