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Ramasamy N, Raj AJLP, Akula VV, Nagarasampatti Palani K. Leveraging experimental and computational tools for advancing carbon capture adsorbents research. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:55069-55098. [PMID: 39225926 DOI: 10.1007/s11356-024-34838-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Accepted: 08/24/2024] [Indexed: 09/04/2024]
Abstract
CO2 emissions have been steadily increasing and have been a major contributor for climate change compelling nations to take decisive action fast. The average global temperature could reach 1.5 °C by 2035 which could cause a significant impact on the environment, if the emissions are left unchecked. Several strategies have been explored of which carbon capture is considered the most suitable for faster deployment. Among different carbon capture solutions, adsorption is considered both practical and sustainable for scale-up. But the development of adsorbents that can exhibit satisfactory performance is typically done through the experimental approach. This hit and trial method is costly and time consuming and often success is not guaranteed. Machine learning (ML) and other computational tools offer an alternate to this approach and is accessible to everyone. Often, the research towards materials focuses on maximizing its performance under simulated conditions. The aim of this study is to present a holistic view on progress in material research for carbon capture and the various tools available in this regard. Thus, in this review, we first present a context on the workflow for carbon capture material development before providing various machine learning and computational tools available to support researchers at each stage of the process. The most popular application of ML models is for predicting material performance and recommends that ML approaches can be utilized wherever possible so that experimentations can be focused on the later stages of the research and development.
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Affiliation(s)
- Niranjan Ramasamy
- Department of Chemical Engineering, Rajalakshmi Engineering College, Chennai, India
| | | | - Vedha Varshini Akula
- Department of Chemical Engineering, Sri Venkateswara College of Engineering, Sriperumbudur, 602117, Kancheepuram, India
| | - Kavitha Nagarasampatti Palani
- Department of Chemical Engineering, Sri Venkateswara College of Engineering, Sriperumbudur, 602117, Kancheepuram, India.
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2
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Liu Y, Liu X, Su A, Gong C, Chen S, Xia L, Zhang C, Tao X, Li Y, Li Y, Sun T, Bu M, Shao W, Zhao J, Li X, Peng Y, Guo P, Han Y, Zhu Y. Revolutionizing the structural design and determination of covalent-organic frameworks: principles, methods, and techniques. Chem Soc Rev 2024; 53:502-544. [PMID: 38099340 DOI: 10.1039/d3cs00287j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
Covalent organic frameworks (COFs) represent an important class of crystalline porous materials with designable structures and functions. The interconnected organic monomers, featuring pre-designed symmetries and connectivities, dictate the structures of COFs, endowing them with high thermal and chemical stability, large surface area, and tunable micropores. Furthermore, by utilizing pre-functionalization or post-synthetic functionalization strategies, COFs can acquire multifunctionalities, leading to their versatile applications in gas separation/storage, catalysis, and optoelectronic devices. Our review provides a comprehensive account of the latest advancements in the principles, methods, and techniques for structural design and determination of COFs. These cutting-edge approaches enable the rational design and precise elucidation of COF structures, addressing fundamental physicochemical challenges associated with host-guest interactions, topological transformations, network interpenetration, and defect-mediated catalysis.
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Affiliation(s)
- Yikuan Liu
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Xiaona Liu
- National Engineering Research Center of Lower-Carbon Catalysis Technology, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.
| | - An Su
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Chengtao Gong
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Shenwei Chen
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Liwei Xia
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Chengwei Zhang
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Xiaohuan Tao
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Yue Li
- Institute of Intelligent Computing, Zhejiang Lab, Hangzhou 311121, China
| | - Yonghe Li
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Tulai Sun
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Mengru Bu
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Wei Shao
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Jia Zhao
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Xiaonian Li
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Yongwu Peng
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
| | - Peng Guo
- National Engineering Research Center of Lower-Carbon Catalysis Technology, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.
- University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yu Han
- School of Emergent Soft Matter, South China University of Technology, Guangzhou, China.
- King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia.
| | - Yihan Zhu
- Center for Electron Microscopy, Institute for Frontier and Interdisciplinary Sciences, State Key Laboratory Breeding Base of Green Chemistry Synthesis Technology, College of Materials Science and Engineering and College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China.
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3
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Wu X, Liu Y. Predicting Gas Adsorption without the Knowledge of Pore Structures: A Machine Learning Method Based on Classical Density Functional Theory. J Phys Chem Lett 2023; 14:10094-10102. [PMID: 37921618 DOI: 10.1021/acs.jpclett.3c02708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2023]
Abstract
Predicting gas adsorption from the pore structure is an intuitive and widely used methodology in adsorption. However, in real-world systems, the structural information is usually very complicated and can only be approximately obtained from the characterization data. In this work, we developed a machine learning (ML) method to predict gas adsorption form the raw characterization data of N2 adsorption. The ML method is modeled by a convolutional neural network and trained by a large number of data that are generated from a classical density functional theory, and the model gives a very accurate prediction of Ar adsorption. Though the training set is limited to modeling slit pores, the model can be applied to three-dimensional structured pores and real-world materials. The good agreements suggest that there is a universal relationship among adsorption isotherms of different adsorbates, which could be captured by the ML model.
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Affiliation(s)
- Xiangkun Wu
- School of Chemical Engineering and Technology, Sun Yat-sen University, Zhuhai 519082, China
| | - Yu Liu
- School of Chemical Engineering and Technology, Sun Yat-sen University, Zhuhai 519082, China
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4
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In situ acid etching boosts mercury accommodation capacities of transition metal sulfides. Nat Commun 2023; 14:1395. [PMID: 36914677 PMCID: PMC10011380 DOI: 10.1038/s41467-023-37140-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Accepted: 03/03/2023] [Indexed: 03/16/2023] Open
Abstract
Transition Metal sulfides (TMSs) are effective sorbents for entrapment of highly polluting thiophiles such as elemental mercury (Hg0). However, the application of these sorbents for mercury removal is stymied by their low accommodation capacities. Among the transition metal sulfides, only CuS has demonstrated industrially relevant accommodation capacity. The rest of the transition metal sulfides have 100-fold lower capacities than CuS. In this work, we overcome these limitations and develop a simple and scalable process to enhance Hg0 accommodation capacities of TMSs. We achieve this by introducing structural motifs in TMSs by in situ etching. We demonstrate that in situ acid etching produces TMSs with defective surface and pore structure. These structural motifs promote Hg0 surface adsorption and diffusion across the entire TMSs architecture. The process is highly versatile and the in situ etched transition metal sulfides show over 100-fold enhancement in their Hg0 accommodation capacities. The generality and the scalability of the process provides a framework to develop TMSs for a broad range of applications.
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5
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Green synthesis of porous biochar with interconnected pore architectures from typical silicon-rich rice husk for efficient CO2 capture. Sep Purif Technol 2022. [DOI: 10.1016/j.seppur.2022.122089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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6
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Mai H, Le TC, Chen D, Winkler DA, Caruso RA. Machine Learning in the Development of Adsorbents for Clean Energy Application and Greenhouse Gas Capture. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2022; 9:e2203899. [PMID: 36285802 PMCID: PMC9798988 DOI: 10.1002/advs.202203899] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 09/27/2022] [Indexed: 06/04/2023]
Abstract
Addressing climate change challenges by reducing greenhouse gas levels requires innovative adsorbent materials for clean energy applications. Recent progress in machine learning has stimulated technological breakthroughs in the discovery, design, and deployment of materials with potential for high-performance and low-cost clean energy applications. This review summarizes basic machine learning methods-data collection, featurization, model generation, and model evaluation-and reviews their use in the development of robust adsorbent materials. Key case studies are provided where these methods are used to accelerate adsorbent materials design and discovery, optimize synthesis conditions, and understand complex feature-property relationships. The review provides a concise resource for researchers wishing to use machine learning methods to rapidly develop effective adsorbent materials with a positive impact on the environment.
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Affiliation(s)
- Haoxin Mai
- Applied Chemistry and Environmental ScienceSchool of ScienceSTEM CollegeRMIT UniversityMelbourneVictoria3001Australia
| | - Tu C. Le
- School of EngineeringSTEM CollegeRMIT UniversityGPO Box 2476MelbourneVictoria3001Australia
| | - Dehong Chen
- Applied Chemistry and Environmental ScienceSchool of ScienceSTEM CollegeRMIT UniversityMelbourneVictoria3001Australia
| | - David A. Winkler
- Monash Institute of Pharmaceutical SciencesMonash UniversityParkvilleVIC3052Australia
- School of Biochemistry and ChemistryLa Trobe UniversityKingsbury DriveBundoora3042Australia
- School of PharmacyUniversity of NottinghamNottinghamNG7 2RDUK
| | - Rachel A. Caruso
- Applied Chemistry and Environmental ScienceSchool of ScienceSTEM CollegeRMIT UniversityMelbourneVictoria3001Australia
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7
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Rahimi M, Abbaspour-Fard MH, Rohani A, Yuksel Orhan O, Li X. Modeling and Optimizing N/O-Enriched Bio-Derived Adsorbents for CO 2 Capture: Machine Learning and DFT Calculation Approaches. Ind Eng Chem Res 2022. [DOI: 10.1021/acs.iecr.2c01887] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Mohammad Rahimi
- Department of Biosystems Engineering, Ferdowsi University of Mashhad, Mashhad 9177948974, Iran
| | | | - Abbas Rohani
- Department of Biosystems Engineering, Ferdowsi University of Mashhad, Mashhad 9177948974, Iran
| | - Ozge Yuksel Orhan
- Department of Chemical Engineering, Hacettepe University, Ankara 06800, Turkey
| | - Xiang Li
- Key Laboratory of Education Ministry for Modern Design and Rotor-Bearing System, Xi’an Jiaotong University, Xi’an 710049, China
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8
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N, S, O co-doped porous carbons derived from bio-based polybenzoxazine for efficient CO2 capture. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.128845] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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9
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Liu T, Johnson KR, Jansone-Popova S, Jiang DE. Advancing Rare-Earth Separation by Machine Learning. JACS AU 2022; 2:1428-1434. [PMID: 35783179 PMCID: PMC9241157 DOI: 10.1021/jacsau.2c00122] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 05/24/2022] [Accepted: 06/01/2022] [Indexed: 05/24/2023]
Abstract
Constituting the bulk of rare-earth elements, lanthanides need to be separated to fully realize their potential as critical materials in many important technologies. The discovery of new ligands for improving rare-earth separations by solvent extraction, the most practical rare-earth separation process, is still largely based on trial and error, a low-throughput and inefficient approach. A predictive model that allows high-throughput screening of ligands is needed to identify suitable ligands to achieve enhanced separation performance. Here, we show that deep neural networks, trained on the available experimental data, can be used to predict accurate distribution coefficients for solvent extraction of lanthanide ions, thereby opening the door to high-throughput screening of ligands for rare-earth separations. One innovative approach that we employed is a combined representation of ligands with both molecular physicochemical descriptors and atomic extended-connectivity fingerprints, which greatly boosts the accuracy of the trained model. More importantly, we synthesized four new ligands and found that the predicted distribution coefficients from our trained machine-learning model match well with the measured values. Therefore, our machine-learning approach paves the way for accelerating the discovery of new ligands for rare-earth separations.
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Affiliation(s)
- Tongyu Liu
- Department
of Chemistry, University of California, Riverside, California 92521, United States
| | - Katherine R. Johnson
- Chemical
Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - Santa Jansone-Popova
- Chemical
Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - De-en Jiang
- Department
of Chemistry, University of California, Riverside, California 92521, United States
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10
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Gopalan J, Buthiyappan A, Raman AAA. Insight into metal-impregnated biomass based activated carbon for enhanced carbon dioxide adsorption: A review. J IND ENG CHEM 2022. [DOI: 10.1016/j.jiec.2022.06.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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11
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Zhao Y, Fan D, Li Y, Yang F. Application of machine learning in predicting the adsorption capacity of organic compounds onto biochar and resin. ENVIRONMENTAL RESEARCH 2022; 208:112694. [PMID: 35007540 DOI: 10.1016/j.envres.2022.112694] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 01/03/2022] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
Detailed prediction of the adsorption amounts of organic pollutants in water is essential to the clean development and management of water resources. In this study, Kriging and polyparameter linear free energy relationship model are coupled to predict adsorption capacity of organic pollutants by biochar and resin. It's based on 1750 adsorption experimental data sets which contains 73 organic compounds on 50 biochars and 30 polymer resins. The Kriging-LFER model shows better accuracy and predictive performance for adsorption (R2 are 0.940 and 0.976) than the published NN-LFER model (R2 are 0.870 and 0.880). Local sensitivity analysis method is adopted to evaluate the influence of each variable on the adsorption coefficient of resin and find out that top sensitive parameters are V and log Ce, to guide parameter optimization. Data's uncertainty analysis is presented by Monte Carlo method. It predicts that the adsorption coefficient will range from 0.062 to 0.189 under the 95% confidence interval. The Kriging-LFER model provides great significance for understanding the importance of various parameters, reducing the number of experiments, adjusting the direction of experimental improvement, and evaluating the fate of organic pollutants in the environment.
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Affiliation(s)
- Ying Zhao
- School of Water Conservancy & Civil Engineering, Northeast Agricultural University, Harbin, 150030, China; Joint Laboratory of Northeast Agricultural University and Max Planck Institute of Colloids and Interfaces (NEAU-MPICI), Harbin, 150030, China
| | - Da Fan
- School of Water Conservancy & Civil Engineering, Northeast Agricultural University, Harbin, 150030, China; Joint Laboratory of Northeast Agricultural University and Max Planck Institute of Colloids and Interfaces (NEAU-MPICI), Harbin, 150030, China
| | - Yuelei Li
- School of Water Conservancy & Civil Engineering, Northeast Agricultural University, Harbin, 150030, China; Joint Laboratory of Northeast Agricultural University and Max Planck Institute of Colloids and Interfaces (NEAU-MPICI), Harbin, 150030, China
| | - Fan Yang
- School of Water Conservancy & Civil Engineering, Northeast Agricultural University, Harbin, 150030, China; Joint Laboratory of Northeast Agricultural University and Max Planck Institute of Colloids and Interfaces (NEAU-MPICI), Harbin, 150030, China.
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Zhang Z, Tian J, Lu Y, Gou X, Li J, Hu W, Lin W, Kim RS, Fu J. Exceptional Selectivity to Olefins in the Deoxygenation of Fatty Acids over an Intermetallic Platinum–Zinc Alloy. Angew Chem Int Ed Engl 2022; 61:e202202017. [DOI: 10.1002/anie.202202017] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Indexed: 01/05/2023]
Affiliation(s)
- Zihao Zhang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Jinshu Tian
- College of Chemical Engineering Zhejiang University of Technology Hangzhou 310014 China
| | - Yubing Lu
- Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Xin Gou
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Junrui Li
- The Gene and Linda Voiland School of Chemical Engineering and Bioengineering Washington State University Pullman WA 99164 USA
| | - Wenda Hu
- The Gene and Linda Voiland School of Chemical Engineering and Bioengineering Washington State University Pullman WA 99164 USA
| | - Wenwen Lin
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - R. Soyoung Kim
- Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Jie Fu
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
- Institute of Zhejiang University-Quzhou 78 Jiuhua Boulevard North Quzhou 324000 China
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13
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Zhang Z, Tian J, Lu Y, Gou X, Li J, Hu W, Lin W, Kim RS, Fu J. Exceptional Selectivity to Olefins in the Deoxygenation of Fatty Acids over an Intermetallic Platinum–Zinc Alloy. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202202017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Zihao Zhang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Jinshu Tian
- College of Chemical Engineering Zhejiang University of Technology Hangzhou 310014 China
| | - Yubing Lu
- Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Xin Gou
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - Junrui Li
- The Gene and Linda Voiland School of Chemical Engineering and Bioengineering Washington State University Pullman WA 99164 USA
| | - Wenda Hu
- The Gene and Linda Voiland School of Chemical Engineering and Bioengineering Washington State University Pullman WA 99164 USA
| | - Wenwen Lin
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
| | - R. Soyoung Kim
- Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
| | - Jie Fu
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education College of Chemical and Biological Engineering Zhejiang University Hangzhou 310027 China
- Institute of Zhejiang University-Quzhou 78 Jiuhua Boulevard North Quzhou 324000 China
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Chaikittisilp W, Yamauchi Y, Ariga K. Material Evolution with Nanotechnology, Nanoarchitectonics, and Materials Informatics: What will be the Next Paradigm Shift in Nanoporous Materials? ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2107212. [PMID: 34637159 DOI: 10.1002/adma.202107212] [Citation(s) in RCA: 51] [Impact Index Per Article: 25.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 10/05/2021] [Indexed: 05/27/2023]
Abstract
Materials science and chemistry have played a central and significant role in advancing society. With the shift toward sustainable living, it is anticipated that the development of functional materials will continue to be vital for sustaining life on our planet. In the recent decades, rapid progress has been made in materials science and chemistry owing to the advances in experimental, analytical, and computational methods, thereby producing several novel and useful materials. However, most problems in material development are highly complex. Here, the best strategy for the development of functional materials via the implementation of three key concepts is discussed: nanotechnology as a game changer, nanoarchitectonics as an integrator, and materials informatics as a super-accelerator. Discussions from conceptual viewpoints and example recent developments, chiefly focused on nanoporous materials, are presented. It is anticipated that coupling these three strategies together will open advanced routes for the swift design and exploratory search of functional materials truly useful for solving real-world problems. These novel strategies will result in the evolution of nanoporous functional materials.
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Affiliation(s)
- Watcharop Chaikittisilp
- JST-ERATO Yamauchi Materials Space-Tectonics Project, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- Research and Services Division of Materials Data and Integrated System (MaDIS), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - Yusuke Yamauchi
- JST-ERATO Yamauchi Materials Space-Tectonics Project, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- Australian Institute for Bioengineering and Nanotechnology (AIBN) and School of Chemical Engineering, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Katsuhiko Ariga
- JST-ERATO Yamauchi Materials Space-Tectonics Project, National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
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15
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Machine-Learned Free Energy Surfaces for Capillary Condensation and Evaporation in Mesopores. ENTROPY 2022; 24:e24010097. [PMID: 35052123 PMCID: PMC8774451 DOI: 10.3390/e24010097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 12/29/2021] [Accepted: 01/05/2022] [Indexed: 12/04/2022]
Abstract
Using molecular simulations, we study the processes of capillary condensation and capillary evaporation in model mesopores. To determine the phase transition pathway, as well as the corresponding free energy profile, we carry out enhanced sampling molecular simulations using entropy as a reaction coordinate to map the onset of order during the condensation process and of disorder during the evaporation process. The structural analysis shows the role played by intermediate states, characterized by the onset of capillary liquid bridges and bubbles. We also analyze the dependence of the free energy barrier on the pore width. Furthermore, we propose a method to build a machine learning model for the prediction of the free energy surfaces underlying capillary phase transition processes in mesopores.
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16
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Sadat Lavasani M, Raeisi Ardali N, Sotudeh-Gharebagh R, Zarghami R, Abonyi J, Mostoufi N. Big data analytics opportunities for applications in process engineering. REV CHEM ENG 2021. [DOI: 10.1515/revce-2020-0054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Big data is an expression for massive data sets consisting of both structured and unstructured data that are particularly difficult to store, analyze and visualize. Big data analytics has the potential to help companies or organizations improve operations as well as disclose hidden patterns and secret correlations to make faster and intelligent decisions. This article provides useful information on this emerging and promising field for companies, industries, and researchers to gain a richer and deeper insight into advancements. Initially, an overview of big data content, key characteristics, and related topics are presented. The paper also highlights a systematic review of available big data techniques and analytics. The available big data analytics tools and platforms are categorized. Besides, this article discusses recent applications of big data in chemical industries to increase understanding and encourage its implementation in their engineering processes as much as possible. Finally, by emphasizing the adoption of big data analytics in various areas of process engineering, the aim is to provide a practical vision of big data.
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Affiliation(s)
- Mitra Sadat Lavasani
- Process Design and Simulation Research Center , School of Chemical Engineering, College of Engineering, University of Tehran , P.O. Box 11155-4563, Tehran , Iran
| | - Nahid Raeisi Ardali
- Process Design and Simulation Research Center , School of Chemical Engineering, College of Engineering, University of Tehran , P.O. Box 11155-4563, Tehran , Iran
| | - Rahmat Sotudeh-Gharebagh
- Process Design and Simulation Research Center , School of Chemical Engineering, College of Engineering, University of Tehran , P.O. Box 11155-4563, Tehran , Iran
| | - Reza Zarghami
- Process Design and Simulation Research Center , School of Chemical Engineering, College of Engineering, University of Tehran , P.O. Box 11155-4563, Tehran , Iran
| | - János Abonyi
- Department of Process Engineering , MTA – PE “Lendület” Complex Systems Monitoring Research Group, University of Pannonia , P.O. Box 158 , Veszprém , Hungary
| | - Navid Mostoufi
- Process Design and Simulation Research Center , School of Chemical Engineering, College of Engineering, University of Tehran , P.O. Box 11155-4563, Tehran , Iran
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17
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Li B, Wang S, Tian Z, Yao G, Li H, Chen L. Understanding the CO
2
/CH
4
/N
2
Separation Performance of Nanoporous Amorphous N‐Doped Carbon Combined Hybrid Monte Carlo with Machine Learning. ADVANCED THEORY AND SIMULATIONS 2021. [DOI: 10.1002/adts.202100378] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Boran Li
- Beijing University of Chemical Technology Beijing 100029 China
- Ningbo Institute of Materials Technology and Engineering Chinese Academy of Sciences Ningbo Zhejiang 315201 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Song Wang
- Department of Chemistry University of California Riverside CA 92521 USA
| | - Ziqi Tian
- Ningbo Institute of Materials Technology and Engineering Chinese Academy of Sciences Ningbo Zhejiang 315201 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Ge Yao
- Nanjing University Nanjing China
| | - Hui Li
- Beijing University of Chemical Technology Beijing 100029 China
| | - Liang Chen
- Ningbo Institute of Materials Technology and Engineering Chinese Academy of Sciences Ningbo Zhejiang 315201 China
- University of Chinese Academy of Sciences Beijing 100049 China
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18
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Xue Y, Ji W, Jiang Y, Yu P, Mao L. Deep Learning for Voltammetric Sensing in a Living Animal Brain. Angew Chem Int Ed Engl 2021; 60:23777-23783. [PMID: 34410032 DOI: 10.1002/anie.202109170] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2021] [Revised: 07/27/2021] [Indexed: 11/11/2022]
Abstract
Numerous neurochemicals have been implicated in the modulation of brain function, making them appealing analytes for sensors and diagnostics. However, it is a grand challenge to selectively measure multiple neurochemicals simultaneously in vivo because of their great variations in concentrations, dynamic nature, and composition. Herein, we present a deep learning-based voltammetric sensing platform for the highly selective and simultaneous analysis of three neurochemicals in a living animal brain. The system features a carbon fiber electrode capable of capturing the mixed dynamics of a neurotransmitter, neuromodulator, and ions. Then a powerful deep neural network is employed to resolve individual chemical and spatial-temporal information. With this, a single electrochemical measurement reveals an interplaying concentration changes of dopamine, ascorbate, and ions in living rat brain, which is unobtainable with existing analytical methodologies. Our strategy provides a powerful means to expedite research in neuroscience and empower sensing-aided diagnostic applications.
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Affiliation(s)
- Yifei Xue
- Beijing National Laboratory for Molecular Science, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing, 100190, China.,College of Chemistry, Beijing Normal University, Beijing, 100875, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Wenliang Ji
- Beijing National Laboratory for Molecular Science, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing, 100190, China
| | - Ying Jiang
- College of Chemistry, Beijing Normal University, Beijing, 100875, China
| | - Ping Yu
- Beijing National Laboratory for Molecular Science, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing, 100190, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Lanqun Mao
- Beijing National Laboratory for Molecular Science, Key Laboratory of Analytical Chemistry for Living Biosystems, Institute of Chemistry, Chinese Academy of Sciences (CAS), Beijing, 100190, China.,College of Chemistry, Beijing Normal University, Beijing, 100875, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
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19
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Xue Y, Ji W, Jiang Y, Yu P, Mao L. Deep Learning for Voltammetric Sensing in a Living Animal Brain. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202109170] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yifei Xue
- Beijing National Laboratory for Molecular Science Key Laboratory of Analytical Chemistry for Living Biosystems Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 China
- College of Chemistry Beijing Normal University Beijing 100875 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Wenliang Ji
- Beijing National Laboratory for Molecular Science Key Laboratory of Analytical Chemistry for Living Biosystems Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 China
| | - Ying Jiang
- College of Chemistry Beijing Normal University Beijing 100875 China
| | - Ping Yu
- Beijing National Laboratory for Molecular Science Key Laboratory of Analytical Chemistry for Living Biosystems Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Lanqun Mao
- Beijing National Laboratory for Molecular Science Key Laboratory of Analytical Chemistry for Living Biosystems Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 China
- College of Chemistry Beijing Normal University Beijing 100875 China
- University of Chinese Academy of Sciences Beijing 100049 China
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20
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Cui H, Xu J, Shi J, Zhang C. Synthesis of sulfur doped carbon from dipotassium anthraquinone-1,8-disulfonate for CO2 adsorption. J CO2 UTIL 2021. [DOI: 10.1016/j.jcou.2021.101582] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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21
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Lim H, Jung Y. MLSolvA: solvation free energy prediction from pairwise atomistic interactions by machine learning. J Cheminform 2021; 13:56. [PMID: 34332634 PMCID: PMC8325294 DOI: 10.1186/s13321-021-00533-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 07/15/2021] [Indexed: 01/04/2023] Open
Abstract
Recent advances in machine learning technologies and their applications have led to the development of diverse structure-property relationship models for crucial chemical properties. The solvation free energy is one of them. Here, we introduce a novel ML-based solvation model, which calculates the solvation energy from pairwise atomistic interactions. The novelty of the proposed model consists of a simple architecture: two encoding functions extract atomic feature vectors from the given chemical structure, while the inner product between the two atomistic feature vectors calculates their interactions. The results of 6239 experimental measurements achieve outstanding performance and transferability for enlarging training data owing to its solvent-non-specific nature. An analysis of the interaction map shows that our model has significant potential for producing group contributions on the solvation energy, which indicates that the model provides not only predictions of target properties but also more detailed physicochemical insights.
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Affiliation(s)
- Hyuntae Lim
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea
| | - YounJoon Jung
- Department of Chemistry, Seoul National University, Seoul, 08826, South Korea.
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22
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Chen H, Shuang H, Lin W, Li X, Zhang Z, Li J, Fu J. Tuning Interfacial Electronic Properties of Palladium Oxide on Vacancy-Abundant Carbon Nitride for Low-Temperature Dehydrogenation. ACS Catal 2021. [DOI: 10.1021/acscatal.1c00712] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Hao Chen
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Huili Shuang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Wenwen Lin
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Xiaoxuan Li
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Zihao Zhang
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Jing Li
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
| | - Jie Fu
- Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou 310027, China
- Institute of Zhejiang University-Quzhou, 78 Jiuhua Boulevard North, Quzhou 324000, China
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23
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Jeon PR, Lee CH. Artificial neural network modelling for solubility of carbon dioxide in various aqueous solutions from pure water to brine. J CO2 UTIL 2021. [DOI: 10.1016/j.jcou.2021.101500] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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24
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Xu J, Wang L, Sun H. Adsorption of neutral organic compounds on polar and nonpolar microplastics: Prediction and insight into mechanisms based on pp-LFERs. JOURNAL OF HAZARDOUS MATERIALS 2021; 408:124857. [PMID: 33418523 DOI: 10.1016/j.jhazmat.2020.124857] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Revised: 12/01/2020] [Accepted: 12/11/2020] [Indexed: 06/12/2023]
Abstract
Adsorption of 18 neutral organic compounds (OCs) on polar (polybutylene succinate (PBS) and polycaprolactone (PCL)) and nonpolar (low-density polyethylene (LDPE) and polystyrene (PS)) microplastics (MPs) were investigated. The adsorption coefficients (Kd) varied with ranges of 130-42,002, 124-27,768, 6.40-10,713, and 1.52-10,332 L kg-1 for adsorption on PCL, PBS, LDPE, and PS MPs, respectively. The polar MPs showed greater adsorption capacities than nonpolar MPs. Non-specific interaction, i.e. hydrophobic partition played a crucial role in the adsorption of OCs on all MPs, while polar interactions also contributed significantly to the greater adsorption on polar MPs. Poly-parameter linear free energy relationships (pp-LFERs) with multiple linear regression (MLR) and feedforward network (FN) were then employed to model the adsorption of OCs on MPs so as to obtain deep insights into adsorption mechanisms. The MLR models achieved Radj2 of 0.90-0.97 and root mean square error (RMSE) of 0.13-0.38 log units, while the FN models achieved Radj2 of 0.85-0.90 and RMSE of 0.21-0.60 log units. The MLR models are more accurate under selected equilibrium concentrations while FN models are capable of making predictions under varying equilibrium concentrations. Lastly, both MLR and FN models showed good prediction on literature adsorption data on nonpolar MPs.
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Affiliation(s)
- Jiaping Xu
- MOE Key Laboratory on Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Lei Wang
- MOE Key Laboratory on Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Hongwen Sun
- MOE Key Laboratory on Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China.
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25
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Ahmad MB, Soomro U, Muqeet M, Ahmed Z. Adsorption of Indigo Carmine dye onto the surface-modified adsorbent prepared from municipal waste and simulation using deep neural network. JOURNAL OF HAZARDOUS MATERIALS 2021; 408:124433. [PMID: 33257121 DOI: 10.1016/j.jhazmat.2020.124433] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 10/27/2020] [Accepted: 10/28/2020] [Indexed: 06/12/2023]
Abstract
A new adsorbent was prepared from municipal wastes (a mixture of Corn Stover, Paper Waste, and Yard Waste) by cationization with 3 ̶ Chloro ̶ 2 ̶ Hydroxypropyl Trimethylammonium Chloride. The FTIR spectrum confirmed the quaternary ammonium group's presence on the adsorbent surface (1450 cm-1). The maximum adsorption capacity (148 mg/g) was higher than the earlier reported values. Liu isotherm described well the adsorption process, with a high R2adj value (0.997). The pseudo-first-order equation fits well for kinetic data, and thermodynamic experiments demonstrated the endothermic nature of the adsorption. The deep neural network (DNN) is applied to simulate the adsorption process, which outperformed the classical machine learning and shallow neural network models. The DNN model predicted accurately the adsorption process with the lowest deviation from the actual values with Mean Absolute Error (MAE = 3.2), Root Mean Squared Error (RMSE = 4.89), and the highest performance accuracy of R2 (0.96) as compared to various classical ML algorithms such as Linear Regressions (MAE = 12.53, RMSE = 18.01, R2 = 0.42), Random Forest (MAE = 5.81, RMSE = 10.05, R2 = 0.82), and Extra Trees (MAE = 4.35, RMSE = 8.22, R2 = 0.88). The utilized DNN model can be used for predicting the removal efficiency of dyes for various combinations of input parameters without going through laboratory experiments.
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Affiliation(s)
- Muhammad Bilal Ahmad
- Department of Computer Science, College of Computer Sciences and Information Technology, Alahsa, King Faisal University, Kingdom of Saudi Arabia.
| | - Umama Soomro
- Department of Environmental Engineering, U.S.-Pakistan Center for Advanced Studies in Water (USPCASW), Mehran University of Engineering and Technology (MUET), Jamshoro, Pakistan
| | - Muhammad Muqeet
- Department of Chemical and Energy Engineering, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology (PAF-IAST), Mang, Haripur, Pakistan
| | - Zubair Ahmed
- Department of Environmental Engineering, U.S.-Pakistan Center for Advanced Studies in Water (USPCASW), Mehran University of Engineering and Technology (MUET), Jamshoro, Pakistan.
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26
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Lai F, Sun Z, Saji SE, He Y, Yu X, Zhao H, Guo H, Yin Z. Machine Learning-Aided Crystal Facet Rational Design with Ionic Liquid Controllable Synthesis. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2021; 17:e2100024. [PMID: 33656246 DOI: 10.1002/smll.202100024] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Revised: 02/02/2021] [Indexed: 06/12/2023]
Abstract
Crystallographic facets in a crystal carry interior properties and proffer rich functionalities in a wide range of application areas. However, rational prediction, on-demand customization, and accurate synthesis of facets and facet junctions of a crystal are enormously desirable but still challenging. Herein, a framework of machine learning (ML)-aided crystal facet design with ionic liquid controllable synthesis is developed and then demonstrated with the star-material anatase TiO2 . Aided by employing ML to acquire surface energies from facet junction datasource, the relationships between surface energy and growth conditions based on the Langmuir adsorption isotherm are unveiled, enabling to develop controllable facet synthetic strategies. These strategies are successfully verified after applied for synthesizing TiO2 crystals with custom crystal facets and facet junctions under tuning ionic liquid [bmim][BF4 ] experimental conditions. Therefore, this innovative framework integrates data-intensive rational design and experimental controllable synthesis to develop and customize crystallographic facets and facet junctions. This proves the feasibility of an intelligent chemistry future to accelerate the discovery of facet-governed functional material candidates.
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Affiliation(s)
- Fuming Lai
- Materials Interfaces Center, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 440305, China
- Jinhua Advanced Research Institute, Jinhua, 321019, China
| | - Zhehao Sun
- Research School of Chemistry, Australian National University, Canberra, ACT, 2601, Australia
- School of Energy and Power Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Sandra Elizabeth Saji
- Research School of Chemistry, Australian National University, Canberra, ACT, 2601, Australia
| | - Yichuan He
- School of Energy and Power Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Xuefeng Yu
- Materials Interfaces Center, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 440305, China
| | - Haitao Zhao
- Materials Interfaces Center, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 440305, China
| | - Haibo Guo
- School of Materials Science and Engineering, Shanghai University, Shanghai, 200444, China
| | - Zongyou Yin
- Research School of Chemistry, Australian National University, Canberra, ACT, 2601, Australia
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27
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Ju CW, Bai H, Li B, Liu R. Machine Learning Enables Highly Accurate Predictions of Photophysical Properties of Organic Fluorescent Materials: Emission Wavelengths and Quantum Yields. J Chem Inf Model 2021; 61:1053-1065. [PMID: 33620207 DOI: 10.1021/acs.jcim.0c01203] [Citation(s) in RCA: 47] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The development of functional organic fluorescent materials calls for fast and accurate predictions of photophysical parameters for processes such as high-throughput virtual screening, while the task is challenged by the limitations of quantum mechanical calculations. We establish a database covering >4300 solvated organic fluorescent dyes with 3000 distinct compounds and develop a new machine learning approach aimed at efficient and accurate predictions of emission wavelength and photoluminescence quantum yield (PLQY). Our feature engineering has given rise to a functionalized structure descriptor (FSD) and a comprehensive general solvent descriptor (CGSD), whereby a highly black-box computational framework is realized with consistently good accuracy across different dye families, ability of describing substitution effects and solvent effects, efficiency for large-scale predictions, and workability with on-the-fly learning. Evaluations with unseen molecules suggest a remarkable mean absolute error of 0.13 for PLQY and 0.080 eV for emission energy, the latter comparable to time-dependent density functional theory (TD-DFT) calculations. An online prediction platform was constructed based on the ensemble model to make predictions in various solvents. Our statistical learning methodology will complement quantum mechanical calculations as an efficient alternative approach for the prediction of these parameters.
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Affiliation(s)
- Cheng-Wei Ju
- College of Chemistry, Nankai University, Tianjin 300071, China
| | - Hanzhi Bai
- Department of Electronic Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Bo Li
- Department of Chemistry, School of Science, Tianjin University, Tianjin 300072, China
| | - Rizhang Liu
- College of Software Engineering, Sichuan University, Chengdu, Sichuan 610064, China
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28
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He H, Yan S, Lyu D, Xu M, Ye R, Zheng P, Lu X, Wang L, Ren B. Deep Learning for Biospectroscopy and Biospectral Imaging: State-of-the-Art and Perspectives. Anal Chem 2021; 93:3653-3665. [PMID: 33599125 DOI: 10.1021/acs.analchem.0c04671] [Citation(s) in RCA: 51] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
With the advances in instrumentation and sampling techniques, there is an explosive growth of data from molecular and cellular samples. The call to extract more information from the large data sets has greatly challenged the conventional chemometrics method. Deep learning, which utilizes very large data sets for finding hidden features therein and for making accurate predictions for a wide range of applications, has been applied in an unbelievable pace in biospectroscopy and biospectral imaging in the recent 3 years. In this Feature, we first introduce the background and basic knowledge of deep learning. We then focus on the emerging applications of deep learning in the data preprocessing, feature detection, and modeling of the biological samples for spectral analysis and spectroscopic imaging. Finally, we highlight the challenges and limitations in deep learning and the outlook for future directions.
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Affiliation(s)
- Hao He
- School of Aerospace Engineering, Xiamen University, Xiamen, 361000, China
| | - Sen Yan
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Danya Lyu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Mengxi Xu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Ruiqian Ye
- School of Aerospace Engineering, Xiamen University, Xiamen, 361000, China
| | - Peng Zheng
- School of Aerospace Engineering, Xiamen University, Xiamen, 361000, China
| | - Xinyu Lu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Lei Wang
- School of Aerospace Engineering, Xiamen University, Xiamen, 361000, China
| | - Bin Ren
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Collaborative Innovation Center of Chemistry for Energy Materials (iChEM), College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
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29
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Forse AC, Milner PJ. New chemistry for enhanced carbon capture: beyond ammonium carbamates. Chem Sci 2020; 12:508-516. [PMID: 34163780 PMCID: PMC8178975 DOI: 10.1039/d0sc06059c] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 12/04/2020] [Indexed: 11/21/2022] Open
Abstract
Carbon capture and sequestration is necessary to tackle one of the biggest problems facing society: global climate change resulting from anthropogenic carbon dioxide (CO2) emissions. Despite this pressing need, we still rely on century-old technology-aqueous amine scrubbers-to selectively remove CO2 from emission streams. Amine scrubbers are effective due to their exquisite chemoselectivity towards CO2 to form ammonium carbamates and (bi)carbonates, but suffer from several unavoidable limitations. In this perspective, we highlight the need for CO2 capture via new chemistry that goes beyond the traditional formation of ammonium carbamates. In particular, we demonstrate how ionic liquid and metal-organic framework sorbents can give rise to capture products that are not favourable for aqueous amines, including carbamic acids, carbamate-carbamic acid adducts, metal bicarbonates, alkyl carbonates, and carbonic acids. These new CO2 binding modes may offer advantages including higher sorption capacities and lower regeneration energies, though additional research is needed to fully explore their utility for practical applications. Overall, we outline the unique challenges and opportunities involved in engineering new CO2 capture chemistry into next-generation technologies.
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Affiliation(s)
- Alexander C Forse
- Department of Chemistry, University of Cambridge Cambridge CB2 1EW UK
| | - Phillip J Milner
- Department of Chemistry and Chemical Biology, Cornell University Ithaca New York 14853 USA
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30
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Liu X, Zhang T, Yang T, Liu X, Song X, Yang Y, Li N, Rignanese GM, Li Y, Wen X. Solving Chemistry Problems via an End-to-End Approach: A Proof of Concept. J Phys Chem A 2020; 124:8866-8873. [DOI: 10.1021/acs.jpca.0c06319] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Xiaotong Liu
- State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, P. R. China
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
- University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, P. R. China
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
| | - Tianfu Zhang
- State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, P. R. China
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
| | - Tao Yang
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
| | - Xiulei Liu
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
| | - Xin Song
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
| | - Yong Yang
- State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, P. R. China
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
| | - Ning Li
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
| | | | - Yongwang Li
- State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, P. R. China
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
| | - Xiaodong Wen
- State Key Laboratory of Coal Conversion, Institute of Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, P. R. China
- National Energy Center for Coal to Liquids, Synfuels China Co., Ltd., Huairou District Beijing 101400, P. R. China
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Information Science and Technology University, Beijing 100101, P. R. China
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31
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Wang S, Li Y, Dai S, Jiang D. Prediction by Convolutional Neural Networks of CO
2
/N
2
Selectivity in Porous Carbons from N
2
Adsorption Isotherm at 77 K. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202005931] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Song Wang
- Department of Chemistry University of California Riverside CA 92521 USA
| | - Yi Li
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Sheng Dai
- Chemical Sciences Division Oak Ridge National Laboratory Oak Ridge TN 37831 USA
- Department of Chemistry The University of Tennessee Knoxville TN 37996 USA
| | - De‐en Jiang
- Department of Chemistry University of California Riverside CA 92521 USA
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32
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Wang S, Li Y, Dai S, Jiang D. Prediction by Convolutional Neural Networks of CO
2
/N
2
Selectivity in Porous Carbons from N
2
Adsorption Isotherm at 77 K. Angew Chem Int Ed Engl 2020; 59:19645-19648. [DOI: 10.1002/anie.202005931] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 06/01/2020] [Indexed: 01/07/2023]
Affiliation(s)
- Song Wang
- Department of Chemistry University of California Riverside CA 92521 USA
| | - Yi Li
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry College of Chemistry Jilin University Changchun Jilin 130012 China
| | - Sheng Dai
- Chemical Sciences Division Oak Ridge National Laboratory Oak Ridge TN 37831 USA
- Department of Chemistry The University of Tennessee Knoxville TN 37996 USA
| | - De‐en Jiang
- Department of Chemistry University of California Riverside CA 92521 USA
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Sigaki HYD, Lenzi EK, Zola RS, Perc M, Ribeiro HV. Learning physical properties of liquid crystals with deep convolutional neural networks. Sci Rep 2020; 10:7664. [PMID: 32376993 PMCID: PMC7203147 DOI: 10.1038/s41598-020-63662-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Accepted: 04/03/2020] [Indexed: 02/03/2023] Open
Abstract
Machine learning algorithms have been available since the 1990s, but it is much more recently that they have come into use also in the physical sciences. While these algorithms have already proven to be useful in uncovering new properties of materials and in simplifying experimental protocols, their usage in liquid crystals research is still limited. This is surprising because optical imaging techniques are often applied in this line of research, and it is precisely with images that machine learning algorithms have achieved major breakthroughs in recent years. Here we use convolutional neural networks to probe several properties of liquid crystals directly from their optical images and without using manual feature engineering. By optimizing simple architectures, we find that convolutional neural networks can predict physical properties of liquid crystals with exceptional accuracy. We show that these deep neural networks identify liquid crystal phases and predict the order parameter of simulated nematic liquid crystals almost perfectly. We also show that convolutional neural networks identify the pitch length of simulated samples of cholesteric liquid crystals and the sample temperature of an experimental liquid crystal with very high precision.
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Affiliation(s)
- Higor Y D Sigaki
- Departamento de Física, Universidade Estadual de Maringá, Maringá, PR, 87020-900, Brazil
| | - Ervin K Lenzi
- Departamento de Física, Universidade Estadual de Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil
| | - Rafael S Zola
- Departamento de Física, Universidade Estadual de Maringá, Maringá, PR, 87020-900, Brazil
- Departamento de Física, Universidade Tecnológica Federal do Paraná, Apucarana, PR, 86812-460, Brazil
| | - Matjaž Perc
- Faculty of Natural Sciences and Mathematics, University of Maribor, Koroška cesta 160, 2000, Maribor, Slovenia
- Department of Medical Research, China Medical University Hospital, China Medical University, Taichung, Taiwan
- Complexity Science Hub Vienna, Josefstädterstraße 39, 1080, Vienna, Austria
| | - Haroldo V Ribeiro
- Departamento de Física, Universidade Estadual de Maringá, Maringá, PR, 87020-900, Brazil.
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Kim B, Lee S, Kim J. Inverse design of porous materials using artificial neural networks. SCIENCE ADVANCES 2020; 6:eaax9324. [PMID: 31922005 PMCID: PMC6941911 DOI: 10.1126/sciadv.aax9324] [Citation(s) in RCA: 87] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2019] [Accepted: 11/07/2019] [Indexed: 05/19/2023]
Abstract
Generating optimal nanomaterials using artificial neural networks can potentially lead to a notable revolution in future materials design. Although progress has been made in creating small and simple molecules, complex materials such as crystalline porous materials have yet to be generated using any of the neural networks. Here, we have implemented a generative adversarial network that uses a training set of 31,713 known zeolites to produce 121 crystalline porous materials. Our neural network takes in inputs in the form of energy and material dimensions, and we show that zeolites with a user-desired range of 4 kJ/mol methane heat of adsorption can be reliably produced using our neural network. The fine-tuning of user-desired capability can potentially accelerate materials development as it demonstrates a successful case of inverse design of porous materials.
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ACS 2019 National Award Winners. Angew Chem Int Ed Engl 2019; 58:5167-5168. [DOI: 10.1002/anie.201902122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Gewinner der ACS National Awards 2019. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201902122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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