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Podh MB, Ratha R, Purohit CS. Template Assisted Synthesis of Linear [5]Catenane by Post-Functionalization of Templated [2]Catenane and Using Click Reaction. Chem Asian J 2024; 19:e202400351. [PMID: 38700467 DOI: 10.1002/asia.202400351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Revised: 05/03/2024] [Accepted: 05/03/2024] [Indexed: 05/05/2024]
Abstract
Polymers with all mechanically interlocked rings, such as linear [n]catenanes, have great potential as functional materials due to possible higher degrees of freedom that may contribute to their flexibility but remain elusive. All the synthetic methods used to prepare such a polymer yield mixtures of products. In the absence of higher molecular weight linear [n]catenanes, emphasis on synthesizing low molecular weight oligomers is being pursued. Here, we have described the synthesis of a linear [5]catenane by post-functionalizing a Co(III) templated [2]catenane having a pyridine-diamide unit free for further metal ion coordination. Two molecules were synthesized with suitable threading groups: one, two terminal azide groups, and two, with two terminal alkyne groups to form two [3]pseudorotaxane utilizing Co(III) coordination. These units were then joined, forming a macrocycle, using click reaction, giving the desired metalated linear [5]catenane in 40 % yield. Removal of metal ions leads to linear [5]catenane. In addition, the formation of linear [3] and [2]catenane are also observed. All synthesized structures have been isolated by column chromatographic technique and characterized by 1H-NMR, 13C-NMR, and mass spectroscopy.
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Affiliation(s)
- Mana Bhanjan Podh
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India-, 752050
- Mana Bhanjan Podh, Radhakrishna Ratha, Chandra Shekhar Purohit, Homi Bhabha National Institute (HBNI) Mumbai, Mumbai, India-, 400094
| | - Radhakrishna Ratha
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India-, 752050
- Mana Bhanjan Podh, Radhakrishna Ratha, Chandra Shekhar Purohit, Homi Bhabha National Institute (HBNI) Mumbai, Mumbai, India-, 400094
| | - Chandra Shekhar Purohit
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India-, 752050
- Mana Bhanjan Podh, Radhakrishna Ratha, Chandra Shekhar Purohit, Homi Bhabha National Institute (HBNI) Mumbai, Mumbai, India-, 400094
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2
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Podh MB, Ratha R, Purohit CS. Template Assisted One-Pot Synthesis of [2], Linear [3], and Radial [4]Catenane via Click Reaction. Chem Asian J 2024; 19:e202400031. [PMID: 38372572 DOI: 10.1002/asia.202400031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 02/15/2024] [Accepted: 02/19/2024] [Indexed: 02/20/2024]
Abstract
Design and synthesis of higher order catenane are unexpectedly complex and involve precise cooperation among the precursors overcoming competing and opposing interactions. We achieved synthesis of [2], linear [3], radial [4] in a one-pot reaction by consecutive ring closing through click reactions. This synthesis gave three isolable products due to two, four, and six-click reactions between suitable coupling partners. Yields of the isolate templated-catenane decrease from lower to higher-ordered catenane (40 %, 12 %, and 4 %), probably due to the bite angle as well as the flexibility of the reacting partners. Removal of templating cobalt(III) ion leads to the formation of fully organic [2], linear [3], and radial [4]catenane. These synthesized catenanes were purified by column chromatography and characterized by 1H-NMR, 13C-NMR, and ESI-MS spectroscopy. The synthesized catenanes have free binding sites suitable for post-functionalization and may be used for the synthesis of higher-ordered catenane.
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Affiliation(s)
- Mana Bhanjan Podh
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India -, 752050
- Homi Bhabha National Institute (HBNI), Mumbai, India -, 400094
| | - Radhakrishna Ratha
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India -, 752050
- Homi Bhabha National Institute (HBNI), Mumbai, India -, 400094
| | - Chandra Shekhar Purohit
- School of Chemical Sciences, National Institute of Science Education and Research (NISER), Jatni, Bhubaneswar, Odisha, India -, 752050
- Homi Bhabha National Institute (HBNI), Mumbai, India -, 400094
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3
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Tranquilli MM, Rawe BW, Liu G, Rowan SJ. The effect of thread-like monomer structure on the synthesis of poly[ n]catenanes from metallosupramolecular polymers. Chem Sci 2023; 14:2596-2605. [PMID: 36908946 PMCID: PMC9993857 DOI: 10.1039/d2sc05542b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 02/06/2023] [Indexed: 02/17/2023] Open
Abstract
The main-chain poly[n]catenane consists of a series of interlocked rings that resemble a macroscopic chain-link structure. Recently, the synthesis of such intriguing polymers was reported via a metallosupramolecular polymer (MSP) template that consists of alternating units of macrocyclic and linear thread-like monomers. Ring closure of the thread components has been shown to yield a mixture of cyclic, linear, and branched poly[n]catenanes. Reported herein are studies aimed at accessing new poly[n]catenanes via this approach and exploring the effect the thread-like monomer structure has on the poly[n]catenane synthesis. Specifically, the effect of the size of the aromatic linker and alkenyl chains of the thread-like monomer is investigated. Three new poly[n]catenanes (with different ring sizes) were prepared using the MSP approach and the results show that tailoring the structure of the thread-like monomer can allow the selective synthesis of branched poly[n]catenanes.
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Affiliation(s)
| | - Benjamin W Rawe
- Pritzker School of Molecular Engineering, University of Chicago Chicago IL USA
| | - Guancen Liu
- Department of Chemistry, University of Chicago Chicago IL USA
| | - Stuart J Rowan
- Department of Chemistry, University of Chicago Chicago IL USA
- Pritzker School of Molecular Engineering, University of Chicago Chicago IL USA
- Chemical and Engineering Sciences, Argonne National Laboratory Lemont IL USA
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Colley N, Nosiglia MA, Tran SL, Harlan GH, Chang C, Li R, Delawder AO, Zhang Y, Barnes JC. Topologically Controlled Syntheses of Unimolecular Oligo[ n]catenanes. ACS CENTRAL SCIENCE 2022; 8:1672-1682. [PMID: 36589894 PMCID: PMC9801505 DOI: 10.1021/acscentsci.2c00697] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Indexed: 06/17/2023]
Abstract
Catenanes are a well-known class of mechanically interlocked molecules that possess chain-like architectures and have been investigated for decades as molecular machines and switches. However, the synthesis of higher-order catenanes with multiple, linearly interlocked molecular rings has been greatly impeded by the generation of unwanted oligomeric byproducts and figure-of-eight topologies that compete with productive ring closings. Here, we report two general strategies for the synthesis of oligo[n]catenanes that rely on a molecular "zip-tie" strategy, where the "zip-tie" is a central core macrocycle precursor bearing two phenanthroline (phen) ligands to make odd-numbered oligo[n]catenanes, or a preformed asymmetric iron(II) complex consisting of two macrocycle precursors bearing phen and terpyridine ligands to make even-numbered oligo[n]catenanes. In either case, preformed macrocycles or [2]catenanes are threaded onto the central "zip-tie" core using metal templation prior to ring-closing metathesis (RCM) reactions that generate several mechanical bonds in one pot. Using these synthetic strategies, a family of well-defined linear oligo[n]catenanes were synthesized, where n = 2, 3, 4, 5, or 6 interlocked molecular rings, and n = 6 represents the highest number of linearly interlocked rings reported to date for any isolated unimolecular oligo[n]catenane.
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Garci A, David AHG, Le Bras L, Ovalle M, Abid S, Young RM, Liu W, Azad CS, Brown PJ, Wasielewski MR, Stoddart JF. Thermally Controlled Exciplex Fluorescence in a Dynamic Homo[2]catenane. J Am Chem Soc 2022; 144:23551-23559. [PMID: 36512436 DOI: 10.1021/jacs.2c10591] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Motion-induced change in emission (MICE) is a phenomenon that can be employed to develop various types of probes, including temperature and viscosity sensors. Although MICE, arising from the conformational motion in particular compounds, has been studied extensively, this phenomenon has not been investigated in depth in mechanically interlocked molecules (MIMs) undergoing coconformational changes. Herein, we report the investigation of a thermoresponsive dynamic homo[2]catenane incorporating pyrene units and displaying relative circumrotational motions of its cyclophanes as evidenced by variable-temperature 1H NMR spectroscopy and supported by its visualization through molecular dynamics simulations and quantum mechanics calculations. The relative coconformational motions induce a significant change in the fluorescence emission of the homo[2]catenane upon changes in temperature compared with its component cyclophanes. This variation in the exciplex emission of the homo[2]catenane is reversible as demonstrated by four complete cooling and heating cycles. This research opens up possibilities of using the coconformational changes in MIMs-based chromophores for probing fluctuations in temperature which could lead to applications in biomedicine or materials science.
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Affiliation(s)
- Amine Garci
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Arthur H G David
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Laura Le Bras
- Laboratoire Chrono-environnement (UMR 6249), Université de Bourgogne Franche-Comté, 16 route de Gray, 25030 Besançon, France
| | - Marco Ovalle
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Seifallah Abid
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Ryan M Young
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,Institute for Sustainability and Energy at Northwestern, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Wenqi Liu
- Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Chandra S Azad
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Paige J Brown
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,Institute for Sustainability and Energy at Northwestern, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Michael R Wasielewski
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,Institute for Sustainability and Energy at Northwestern, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - J Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,School of Chemistry, University of New South Wales, Sydney, NSW 2052, Australia.,Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou 310027, China.,ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou 311215, China
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Washino G, Soto MA, Wolff S, MacLachlan MJ. Preprogrammed assembly of supramolecular polymer networks via the controlled disassembly of a metastable rotaxane. Commun Chem 2022; 5:155. [PMID: 36698032 PMCID: PMC9814676 DOI: 10.1038/s42004-022-00774-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 11/08/2022] [Indexed: 11/24/2022] Open
Abstract
In our daily life, some of the most valuable commodities are preprogrammed or preassembled by a manufacturer; the end-user puts together the final product and gathers properties or function as desired. Here, we present a chemical approach to preassembled materials, namely supramolecular polymer networks (SPNs), which wait for an operator's command to organize autonomously. In this prototypical system, the controlled disassembly of a metastable interlocked molecule (rotaxane) liberates an active species to the medium. This species crosslinks a ring-containing polymer and assembles with a reporting macrocycle to produce colorful SPNs. We demonstrate that by using identical preprogrammed systems, one can access multiple supramolecular polymer networks with different degrees of fluidity (μ* = 2.5 to 624 Pa s-1) and color, all as desired by the end-user.
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Affiliation(s)
- Gosuke Washino
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1 Canada
| | - Miguel A. Soto
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1 Canada
| | - Siad Wolff
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1 Canada
| | - Mark J. MacLachlan
- grid.17091.3e0000 0001 2288 9830Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1 Canada ,grid.17091.3e0000 0001 2288 9830Stewart Blusson Quantum Matter Institute, University of British Columbia, 2355 East Mall, Vancouver, BC V6T 1Z4 Canada ,grid.17091.3e0000 0001 2288 9830Bioproducts Institute, University of British Columbia, 2385 East Mall, Vancouver, BC V6T 1Z4 Canada ,grid.9707.90000 0001 2308 3329WPI Nano Life Science Institute, Kanazawa University, Kanazawa, 920-1192 Japan
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Yao Y, Deng Y, Kong L, Au-Yeung HY. Efficient Copper(I) Extraction by Ethylenediamine from Stable Catenane Complexes. Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202200271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Yulin Deng
- University of Hong Kong Chemistry HONG KONG
| | | | - Ho Yu Au-Yeung
- The University of Hong Kong Department of Chemistry Chong Yuet Ming Chemistry BuildingPokfulam Road NA Hong Kong HONG KONG
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8
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Au-Yeung HY, Deng Y. Distinctive features and challenges in catenane chemistry. Chem Sci 2022; 13:3315-3334. [PMID: 35432874 PMCID: PMC8943846 DOI: 10.1039/d1sc05391d] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 02/04/2022] [Indexed: 11/21/2022] Open
Abstract
From being an aesthetic molecular object to a building block for the construction of molecular machines, catenanes and related mechanically interlocked molecules (MIMs) continue to attract immense interest in many research areas. Catenane chemistry is closely tied to that of rotaxanes and knots, and involves concepts like mechanical bonds, chemical topology and co-conformation that are unique to these molecules. Yet, because of their different topological structures and mechanical bond properties, there are some fundamental differences between the chemistry of catenanes and that of rotaxanes and knots although the boundary is sometimes blurred. Clearly distinguishing these differences, in aspects of bonding, structure, synthesis and properties, between catenanes and other MIMs is therefore of fundamental importance to understand their chemistry and explore the new opportunities from mechanical bonds.
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Affiliation(s)
- Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
- State Key Laboratory of Synthetic Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
| | - Yulin Deng
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
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