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Ahmed S, Rafi UM, Senthil Kumar R, Bhat AR, Berredjem M, Niranjan V, C L, Rahiman AK. Theoretical, antioxidant, antidiabetic and in silico molecular docking and pharmacokinetics studies of heteroleptic oxovanadium(IV) complexes of thiosemicarbazone-based ligands and diclofenac. J Biomol Struct Dyn 2023:1-20. [PMID: 37599509 DOI: 10.1080/07391102.2023.2246565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 08/03/2023] [Indexed: 08/22/2023]
Abstract
A series of new heteroleptic oxovanadium(IV) complexes with the general formula [VOL1-6(Dcf)] (1-6), where L1-6 = thiosemicarbazone (TSC)-based ligands and Dcf = diclofenac have been synthesized and characterized. The spectral studies along with the density functional theory calculations evidenced the distorted square-pyramidal geometry around oxovanadium(IV) ion through imine nitrogen and thione sulfur atoms of TSC moiety, and two asymmetric carboxylate oxygen atoms of diclofenac drug. The complexes were evaluated for in vitro antioxidant activity using 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), 2,2'-diphenyl-1-picrylhydrazyl (DPPH), hydrogen peroxide (H2O2) and superoxide radical scavenging assays with respect to the standard antioxidant drugs butylated hydroxyanisole (BHA) and rutin. The in vitro antidiabetic activity of the complexes was tested with enzymes such as α-amylase, α-glucosidase and glucose-6-phosphatase. The complexes containing methyl substituent showed higher activity than that containing the nitro substituent due to the electron-donating effect of methyl group. The in silico molecular docking studies of the oxovanadium(IV) complexes with α-amylase and α-glucosidase enzymes showed strong interaction via hydrogen bonding and hydrophobic interactions. The dynamic behavior of the proposed complexes was analyzed by molecular dynamics (MDs) simulations, which revealed the stability of docked structures with α-amylase and α-glucosidase enzymes. The in silico physicochemical and pharmacokinetics parameters, such as Lipinski's 'rule of five', Veber's rule and absorption, distribution, metabolism and excretion (ADME) properties predicted non-toxic, non-carcinogenic and safe oral administration of the synthesized complexes.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Sumeer Ahmed
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), University of Madras, Chennai, India
| | - Ummer Muhammed Rafi
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), University of Madras, Chennai, India
| | - Raju Senthil Kumar
- Department of Pharmaceutical Chemistry, Swamy Vivekanandha College of Pharmacy, Elayampalayam, Tiruchengodu, India
| | - Ajmal Rashid Bhat
- Department of Chemistry, Rashtrasant Tukadoji Maharaj Nagpur University, Nagpur, India
| | - Malika Berredjem
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar-Annaba University, Annaba, Algeria
| | - Vidya Niranjan
- Department of Biotechnology, RV College of Engineering, Bengaluru, India
| | - Lavanya C
- Department of Biotechnology, RV College of Engineering, Bengaluru, India
| | - Aziz Kalilur Rahiman
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), University of Madras, Chennai, India
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2
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Sargazi S, Shahraki S, Shahraki O, Zargari F, Sheervalilou R, Maghsoudi S, Soltani Rad MN, Saravani R. 8-Alkylmercaptocaffeine derivatives: antioxidant, molecular docking, and in-vitro cytotoxicity studies. Bioorg Chem 2021; 111:104900. [PMID: 33894429 DOI: 10.1016/j.bioorg.2021.104900] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 04/01/2021] [Accepted: 04/06/2021] [Indexed: 12/12/2022]
Abstract
Due to their unique pharmacological characteristics, methylxanthines are known as therapeutic agents in a fascinating range of medicinal scopes. In this report, we aimed to examine some biological effects of previously synthesized 8-alkylmercaptocaffeine derivatives. Cytotoxic and antioxidative activity of 8-alkylmercaptocaffeine derivatives were measured in malignant A549, MCF7, and C152 cell lines. Assessment of cGMP levels and caspase-3 activity were carried out using a colorimetric competitive ELISA kit. Computational approaches were employed to discover the inhibitory mechanism of synthesized compounds. Among the twelve synthesized derivatives, three compounds (C1, C5, and C7) bearing propyl, heptyl, and 3-methyl-butyl moieties showed higher and more desirable cytotoxic activity against all the studied cell lines (IC50 < 100 µM). Furthermore, C5 synergistically enhanced cisplatin-induced cytotoxicity in MCF-7 cells (CI < 1). Both C5 and C7 significantly increased caspase-3 activity and intracellular cGMP levels at specific time intervals in all studied cell lines (P < 0.05). However, these derivatives did not elevate LDH leakage (P > 0.05) and exhibited no marked ameliorating effects on oxidative damage (P > 0.05). Computational studies showed that H-bond formation between the nitrogen atom in pyrazolo[4,3-D] pyrimidine moiety with Gln817 and creating a hydrophobic cavity result in the stability of the alkyl group in the PDE5A active site. We found that synthesized 8-alkylmercaptocaffeine derivatives induced cell death in different cancer cells through the cGMP pathway. These findings will help us to get a deeper insight into the role of methylxanthines as useful alternatives to conventional cancer therapeutics.
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Affiliation(s)
- Saman Sargazi
- Cellular and Molecular Research Center, Resistant Tuberculosis Institute, Zahedan University of Medical Sciences, Zahedan, Iran.
| | - Sheida Shahraki
- Cellular and Molecular Research Center, Resistant Tuberculosis Institute, Zahedan University of Medical Sciences, Zahedan, Iran
| | - Omolbanin Shahraki
- Pharmacology Research Center, Zahedan University of Medical Sciences, Zahedan, Iran.
| | - Farshid Zargari
- Pharmacology Research Center, Zahedan University of Medical Sciences, Zahedan, Iran; Department of Chemistry, Faculty of Science, University of Sistan and balouchestan, Zahedan, Iran
| | | | - Saeid Maghsoudi
- Medicinal Chemistry Research Laboratory, Department of Chemistry, Shiraz University of Technology, Shiraz, Iran
| | - Mohammad Navid Soltani Rad
- Medicinal Chemistry Research Laboratory, Department of Chemistry, Shiraz University of Technology, Shiraz, Iran
| | - Ramin Saravani
- Cellular and Molecular Research Center, Resistant Tuberculosis Institute, Zahedan University of Medical Sciences, Zahedan, Iran; Department of Clinical Biochemistry, School of Medicine, Zahedan University of Medical Sciences, Zahedan, Iran
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3
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Tansky M, Gu Z, Comito RJ. Metal-free, Mild, and Selective Synthesis of Bis(pyrazolyl)alkanes by Nucleophile-Catalyzed Condensation. J Org Chem 2021; 86:1601-1611. [PMID: 33356263 DOI: 10.1021/acs.joc.0c02442] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Bis(pyrazolyl)alkanes are a prolific class of ligands for catalysis, accessible by the condensation between bis(pyrazolyl)methanones and carbonyls. In this report, we describe a nucleophile-catalyzed innovation on this condensation that avoids the transition metals, high temperatures, reagent excess, and air-sensitive reagents common among the existing protocols. Significantly, this method accommodates sterically hindered and electronically diverse pyrazoles and aldehydes, applicable for systematic ligand optimization. Furthermore, our scope includes azoles and bridging functional groups previously unreported for this reaction, promising for new heteroscorpionate catalysts. We provide the first direct evidence for an elusive reaction intermediate and characterize the most complete mechanism for this condensation.
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Affiliation(s)
- Maxym Tansky
- The University of Houston, Houston, Texas 77004, United States
| | - Zipeng Gu
- The University of Houston, Houston, Texas 77004, United States
| | - Robert J Comito
- The University of Houston, Houston, Texas 77004, United States
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4
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Faghih Z, Neshat A, Mastrorilli P, Gallo V, Faghih Z, Gilanchi S. Cu(II), Ni(II) and Co(II) complexes with homoscorpionate Bis(2-Mercaptobenzimidazolyl) and Bis(2-Mercaptobenzothiazolyl)borate ligands: Synthesis and in vitro cytotoxicity studies. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2020.119896] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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5
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In Silico Evaluation of Food Derived Bioactive Peptides as Inhibitors of Angiotensin Converting Enzyme (ACE). Int J Pept Res Ther 2020. [DOI: 10.1007/s10989-020-10090-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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6
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Ling N, Wang X, Zeng D, Zhang YW, Fang X, Yang HX. Synthesis, characterization and biological assay of three new benzotriazole-based Zn(II) complexes. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127641] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Liu M, Song XQ, Wu YD, Qian J, Xu JY. Cu(ii)-TACN complexes selectively induce antitumor activity in HepG-2 cells via DNA damage and mitochondrial-ROS-mediated apoptosis. Dalton Trans 2020; 49:114-123. [DOI: 10.1039/c9dt03641e] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A novel 1,4,7-triazacyclononane derivative (btacn), and its related copper complexes, Cu(btacn)Cl2 and [Cu(btacn)2]·(ClO4)2, exhibit potent anti-proliferation activity towards HepG-2 and HeLa cells, but low cytotoxicity towards normal cell lines.
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Affiliation(s)
- Ming Liu
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules; Key Laboratory of Inorganic-Organic Hybrid Functional Material Chemistry
- Ministry of Education; College of Chemistry
- Tianjin Normal University
- Tianjin 300387
- China
| | - Xue-Qing Song
- Tianjin Key Laboratory on Technologies Enabling Development of Clinical Therapeutics and Diagnostics (Theranostics)
- School of Pharmacy
- Tianjin Medical University
- Tianjin 300070
- China
| | - Yuan-Di Wu
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules; Key Laboratory of Inorganic-Organic Hybrid Functional Material Chemistry
- Ministry of Education; College of Chemistry
- Tianjin Normal University
- Tianjin 300387
- China
| | - Jing Qian
- Tianjin Key Laboratory of Structure and Performance for Functional Molecules; Key Laboratory of Inorganic-Organic Hybrid Functional Material Chemistry
- Ministry of Education; College of Chemistry
- Tianjin Normal University
- Tianjin 300387
- China
| | - Jing-Yuan Xu
- Tianjin Key Laboratory on Technologies Enabling Development of Clinical Therapeutics and Diagnostics (Theranostics)
- School of Pharmacy
- Tianjin Medical University
- Tianjin 300070
- China
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Jayakumar S, Mahendiran D, Arumai Selvan D, Kalilur Rahiman A. Bis(imidazol-1-yl)methane-based heteroscorpionate metal(II) complexes: Theoretical, antimicrobial, antioxidant, in vitro cytotoxicity and c-Met tyrosine kinase studies. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.06.088] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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9
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Jayakumar S, Mahendiran D, Rahiman AK. Theoretical, antimicrobial, antioxidant, in vitro cytotoxicity, and cyclin-dependent kinase 2 inhibitor studies of metal(II) complexes with bis(imidazol-1-yl)methane-based heteroscorpionate ligands. J COORD CHEM 2019. [DOI: 10.1080/00958972.2019.1620217] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- S. Jayakumar
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), Chennai, India
- Department of Chemistry, Misrimal Navajee Munoth Jain Engineering College, Chennai, India
| | - D. Mahendiran
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), Chennai, India
- Molecular Pharmacology and Pathology Program, Department of Pathology, Bosch Institute, University of Sydney, Sydney, Australia
| | - A. Kalilur Rahiman
- Post-Graduate and Research Department of Chemistry, The New College (Autonomous), Chennai, India
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Rafi UM, Mahendiran D, Kumar RS, Rahiman AK. In vitro
anti‐proliferative and
in silico
docking studies of heteroleptic copper(II) complexes of pyridazine‐based ligands and ciprofloxacin. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.4946] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- U. Muhammed Rafi
- Post‐Graduate and Research Department of ChemistryThe New College (Autonomous) Chennai 600 014 India
| | - D. Mahendiran
- Post‐Graduate and Research Department of ChemistryThe New College (Autonomous) Chennai 600 014 India
- Molecular Pharmacology and Pathology Program, Department of Pathology, Bosch InstituteUniversity of Sydney NSW 2006 Australia
| | - R. Senthil Kumar
- Department of Pharmaceutical ChemistrySwamy Vivekanandha College of Pharmacy Elayampalayam Tiruchengodu 637 205 India
| | - A. Kalilur Rahiman
- Post‐Graduate and Research Department of ChemistryThe New College (Autonomous) Chennai 600 014 India
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11
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Roa AE, Salazar V, Mendoza-Espinosa D, Paneque M, Rodríguez-Diéguez A, Rodríguez AM, Tejeda J, Castro-Osma JA, Otero A, Lara-Sánchez A. Study of the Coordination Modes of Hybrid NNCp Cyclopentadienyl/Scorpionate Ligands in Ir Compounds. Inorg Chem 2019; 58:900-908. [DOI: 10.1021/acs.inorgchem.8b03030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Arián E. Roa
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Hidalgo, 42039 Pachuca de Soto, Hidalgo, Mexico
- Centro de Investigación en Química Aplicada, Unidad Monterrey, Alianza Sur No. 204 Parque de Innovación e Investigación Tecnológica (PIIT), 66629 Apodaca, Nuevo León, Mexico
| | - Verónica Salazar
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Hidalgo, 42039 Pachuca de Soto, Hidalgo, Mexico
| | - Daniel Mendoza-Espinosa
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Hidalgo, 42039 Pachuca de Soto, Hidalgo, Mexico
| | - Margarita Paneque
- Instituto de Investigaciones Químicas (IIQ), Departamento de Química Inorgánica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), CSIC and Universidad de Sevilla, Avenida Américo Vespucio 49, 41092 Sevilla, Spain
| | - Antonio Rodríguez-Diéguez
- Departamento de Química Inorgánica, Facultad de Ciencias, Universidad de Granada, Avenida de Fuentenueva s/n, 18071 Granada, Spain
| | - Ana M. Rodríguez
- Departamento de Química Inorgánica, Orgánica y Bioquímica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain
| | - Juan Tejeda
- Departamento de Química Inorgánica, Orgánica y Bioquímica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain
| | - José A. Castro-Osma
- Departamento de Química Inorgánica, Orgánica y Bioquímica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain
| | - Antonio Otero
- Departamento de Química Inorgánica, Orgánica y Bioquímica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain
| | - Agustín Lara-Sánchez
- Departamento de Química Inorgánica, Orgánica y Bioquímica, and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias y Tecnologías Químicas, Universidad de Castilla-La Mancha, 13071 Ciudad Real, Spain
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12
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Hormann J, Malina J, Lemke O, Hülsey MJ, Wedepohl S, Potthoff J, Schmidt C, Ott I, Keller BG, Brabec V, Kulak N. Multiply Intercalator-Substituted Cu(II) Cyclen Complexes as DNA Condensers and DNA/RNA Synthesis Inhibitors. Inorg Chem 2018; 57:5004-5012. [DOI: 10.1021/acs.inorgchem.8b00027] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jan Hormann
- Institut für Chemie und Biochemie, Anorganische Chemie, Freie Universität Berlin, Fabeckstr. 34/36, 14195 Berlin, Germany
| | - Jaroslav Malina
- Institute of Biophysics, Academy of Sciences of the Czech Republic, Kralovopolska 135, 61265 Brno, Czech Republic
| | - Oliver Lemke
- Institut für Chemie und Biochemie, Physikalische und Theoretische Chemie, Freie Universität Berlin, Takustr. 3, 14195 Berlin, Germany
| | - Max J. Hülsey
- Institut für Chemie und Biochemie, Anorganische Chemie, Freie Universität Berlin, Fabeckstr. 34/36, 14195 Berlin, Germany
- Biochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120 Heidelberg, Germany
- Department of Chemical and Biomolecular Engineering, National University of Singapore, 4 Engineering Drive 4, Singapore 117585, Singapore
| | - Stefanie Wedepohl
- Institut für Chemie und Biochemie, Organische Chemie, Freie Universität Berlin, Takustr. 3, 14195 Berlin, Germany
| | - Jan Potthoff
- Institut für Chemie und Biochemie, Anorganische Chemie, Freie Universität Berlin, Fabeckstr. 34/36, 14195 Berlin, Germany
| | - Claudia Schmidt
- Institut für Medizinische und Pharmazeutische Chemie, Technische Universität Braunschweig, Beethovenstr. 55, 38106 Braunschweig, Germany
| | - Ingo Ott
- Institut für Medizinische und Pharmazeutische Chemie, Technische Universität Braunschweig, Beethovenstr. 55, 38106 Braunschweig, Germany
| | - Bettina G. Keller
- Institut für Chemie und Biochemie, Physikalische und Theoretische Chemie, Freie Universität Berlin, Takustr. 3, 14195 Berlin, Germany
| | - Viktor Brabec
- Institute of Biophysics, Academy of Sciences of the Czech Republic, Kralovopolska 135, 61265 Brno, Czech Republic
| | - Nora Kulak
- Institut für Chemie und Biochemie, Anorganische Chemie, Freie Universität Berlin, Fabeckstr. 34/36, 14195 Berlin, Germany
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Shahraki S, Heydari A. Binding forces between a novel Schiff base palladium(II) complex and two carrier proteins: human serum albumi and β-lactoglobulin. J Biomol Struct Dyn 2017; 36:2807-2821. [PMID: 28812944 DOI: 10.1080/07391102.2017.1367723] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Ligand binding studies on carrier proteins are crucial in determining the pharmacological properties of drug candidates. Here, a new palladium(II) complex was synthesized and characterized. The in vitro binding studies of this complex with two carrier proteins, human serum albumin (HSA), and β-lactoglobulin (βLG) were investigated by employing biophysical techniques as well as computational modeling. The experimental results showed that the Pd(II) complex interacted with two carrier proteins with moderate binding affinity (Kb ≈ .5 × 104 M-1 for HSA and .2 × 103 M-1 for βLG). Binding of Pd(II) complex to HSA and βLG caused strong fluorescence quenching of both proteins through static quenching mechanism. In two studied systems hydrogen bonds and van der Waals forces were the major stabilizing forces in the drug-protein complex formation. UV-Visible and FT-IR measurements indicated that the binding of above complex to HSA and βLG may induce conformational and micro-environmental changes of two proteins. Protein-ligand docking analysis confirmed that the Pd(II) complex binds to residues located in the subdomain IIA of HSA and site A of βLG. All these experimental and computational results suggest that βLG and HSA might act as carrier protein for Pd(II) complex to deliver it to the target molecules.
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Key Words
- Ala, Alanine
- Cys, Cysteine
- DFT, Density Functional Theory
- DMSO, Dimethyl sulfoxide
- HOMO, highest occupied molecular orbital
- HSA, Human Serum Albumin
- LUMO, lowest unoccupied molecular orbital
- Leu, Leucine
- Lys, Lysine
- NMR, Nuclear Magnetic Resonance
- Pd(II) complex
- Pro, Proline
- Schiff base
- TMS, Tetramethylsilane
- Trp, Tryptophan
- Tyr, Tyrosine
- Val, Valine
- human serum albumin
- protein interactions
- β-lactoglobulin
- βLG, β-lactoglobulin
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Affiliation(s)
- Somaye Shahraki
- a Department of Chemistry , University of Zabol , Zabol , Iran
| | - Ali Heydari
- b Department of Chemistry , University of Sistan and Baluchestan , Zahedan , Iran
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