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Gurbanov AV, Firoozbakht F, Pourshirband N, Sharafi-Badr P, Hayati P, Souri B, Eshghi F, Kaminsky W, Mahmoudi G, Verpoort F, Mehrabadi Z. A new 1D Mn(II) coordination polymer: Synthesis, crystal structure, hirshfeld surface analysis and molecular docking studies. Heliyon 2024; 10:e29565. [PMID: 38699722 PMCID: PMC11063412 DOI: 10.1016/j.heliyon.2024.e29565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 04/10/2024] [Accepted: 04/10/2024] [Indexed: 05/05/2024] Open
Abstract
The synthesis of novel metal-organic coordination polymers (MOCP) with the chemical formula [Mn2L (SCN)2(OH)2]3·CH3OH [L = 1,5-bis(pyridine-4-ylmethylene) carbonohydrazide] {1} was accomplished using two different techniques: solvothermal and sonochemical ultrasonic-assisted. An investigation was carried out to examine the impact of various factors such as reaction time, sonication power, temperature, and reactant concentration on the morphology and size of the crystals. Interestingly, it was found that sonication power and temperature did not affect the crystals' morphology and size. To further analyze the prepared microcrystals of MOCPs, SEM was utilized to examine their surface morphology, and XRD, elemental evaluation composition. The identification of the functional groups present in the prepared Mn-MOCPs was accomplished through the utilization of FT-IR spectroscopy. Subsequently, the calcination of 1 in an air atmosphere at 650 °C led to the formation of Mn3O4 nanoparticles. The geometric and electronic structure of the MOCPs was evaluated using density functional theory (DFT). The utilization of molecular docking methodologies demonstrated that the best cavity of the human androgen receptor possessed an interaction energy of -116.3 kJ mol-1. This energy encompassed a combination of both bonding and non-bonding interactions. The Results showed that steric interaction and electrostatic potential are the main interactions in AR polymer and Mn(II). These interactions in the defined cavity indicated that this polymer could be an effective anti-prostate candidate, because AR is involved in the growth of prostate cancer cells, and these interactions indicated the inhibition of prostate cancer cell growth.
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Affiliation(s)
- Atash V. Gurbanov
- Centro de Química Estrutural, Institute of Molecular Sciences, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal
- Excellence Center, Baku State University, Z. Khalilov Str. 23, AZ 1148 Baku, Azerbaijan
- Western Caspian University, Istiqlaliyyat Street 31, AZ 1001, Baku, Azerbaijan
| | - Fateme Firoozbakht
- Department of Chemistry, University of Isfahan, Isfahan 81746-73441, Iran
| | - Nafiseh Pourshirband
- Department of Chemistry, Shahreza Branch, Islamic Azad University, P.O. Box 311-86145, Shahreza, Isfahan, Iran
| | - Paria Sharafi-Badr
- Department of Pharmacognosy and Pharmaceutical Biotechnology, School of Pharmacy, Iran University of Medical Sciences, Tehran, Iran
| | - Payam Hayati
- Organic and Nano Group (ONG), Department of Chemistry, Iran University of Science and Technology (IUST), PO Box 16846-13114, Tehran, Iran
| | - Bagher Souri
- Department of Chemistry, Faculty of Sciences, University of Sistan and Baluchestan, Zahedan, Iran
| | - Fazlolah Eshghi
- Department of Chemistry, College of Sciences, Shiraz University, Shiraz, Iran
| | - Werner Kaminsky
- X-ray Crystallography Laboratory, University of Washington, United States
| | - Ghodrat Mahmoudi
- Department of Chemistry, Faculty of Science, University of Maragheh, P.O. Box 55136-83111, Maragheh, Iran
- Chemistry Department, Faculty of Engineering and Natural Sciences, Istinye University, Sarıyer, Istanbul 34396, Turkey
| | - Francis Verpoort
- State Key Laboratory of Advanced Technology for Materials Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, China
| | - Zohreh Mehrabadi
- Department of Chemistry, Firoozabad Branch, Islamic Azad University, Firoozabad, Iran
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Eshghi F, Mehrabadi Z, Farsadrooh M, Hayati P, Javadian H, Karimi M, Karimi-Maleh H, Rostamnia S, Karaman C, Aghababaei F. Photocatalytic degradation of remdesivir nucleotide pro-drug using [Cu(1-methylimidazole) 4(SCN) 2] nanocomplex synthesized by sonochemical process: Theoretical, hirshfeld surface analysis, degradation kinetic, and thermodynamic studies. ENVIRONMENTAL RESEARCH 2023; 222:115321. [PMID: 36696944 DOI: 10.1016/j.envres.2023.115321] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 12/11/2022] [Accepted: 01/16/2023] [Indexed: 06/17/2023]
Abstract
The first ultrasonic synthesis of [Cu(L)4(SCN)2] (L = 1-methylimidazole) nanocomplex was carried out under ultrasonic irradiation, and its photocatalytic performance for the degradation of remdesivir (RS) under sunlight irradiation was comprehensively investigated for the first time in this study. The physicochemical properties of the synthesized photocatalyst were examined by Fourier-transform infrared (FT-IR), field emission scanning electron microscopy (FE-SEM), diffuse reflectance spectroscopy (DRS), and thermogravimetric analysis (TGA) techniques. The band gap of the synthesized [Cu(L)4(SCN)2] nanocomplex was determined to be 2.60 eV by the diffuse reflectance spectroscopy method using Kubelka-Munk formula. The photocatalytic performance of nanocomplex was examined for the removal of remdesivir under sunlight from water for which the results indicated that an amount of 0.5 gL-1 of the [Cu(L)4(SCN)2] nanocomplex was sufficient to remove more than 96% remdesivir from its 2 mg L-1 concentration within 20 min, at pH = 6. The kinetic data showed that the photodegradation onto the [Cu(L)4(SCN)2] nanocomplex has a high correlation (0.98) with the pseudo-second-order kinetic model. The decrease in chemical oxygen demand (COD) (from 70.5 mg L-1 to 36.4 mg L-1) under optimal conditions clearly confirmed the mineralization of the RS drug. The values of ΔS° (-0.131 kJ mol-1 K-1) and ΔH° (-49.750 kJ mol-1) were negative, indicating that the adsorption process was spontaneous and more favorable in lower temperatures. Moreover, the RS structure in the open shell state and the high HOMO and LUMO gaps based on the M06/6-31 + G (d) level of theory may be a confirmation of this fact. In addition, the Hirshfeld surface analysis (HSA) of the crystal packing of the prepared complex was discussed in detail to evaluate the interactions between the crystal packings. The results of this study confirm that the [Cu(L)4(SCN)2] nanocomplex can be successfully used for the photodegradation of pharmaceutical contaminants.
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Affiliation(s)
- Fazlolah Eshghi
- Department of Chemistry, College of Sciences, Shiraz University, Shiraz, Iran
| | - Zohreh Mehrabadi
- Department of Chemistry, Firoozabad Branch, Islamic Azad University, Firoozabad, Iran.
| | - Majid Farsadrooh
- Renewable Energies Research Laboratory, Department of Chemistry, Faculty of Sciences, University of Sistan and Baluchestan, P.O. Box, 98135 674, Zahedan, Iran.
| | - Payam Hayati
- Organic and Nano Group (ONG), Department of Chemistry, Iran University of Science and Technology (IUST), PO Box, 16846-13114, Tehran, Iran.
| | - Hamedreza Javadian
- Chemistry & Chemical Engineering Research Center of Iran (CCERCI), P.O. Box 14335-186, Tehran, Iran
| | - Mehdi Karimi
- School of Chemistry, College of Science, University of Tehran, Tehran, Iran
| | - Hassan Karimi-Maleh
- School of Resources and Environment, University of Electronic Science and Technology of China, P.O.Box 611731, Xiyuan Ave, Chengdu, China; Department of Chemical Engineering, Quchan University of Technology, Quchan, 9477177870, Iran; Department of Sustainable Engineering, Saveetha School of Engineering, SIMATS, Chennai, 602105, India.
| | - Sadegh Rostamnia
- Organic and Nano Group (ONG), Department of Chemistry, Iran University of Science and Technology (IUST), PO Box, 16846-13114, Tehran, Iran.
| | - Ceren Karaman
- Department of Electricity and Energy, Akdeniz University, Antalya, 07070, Turkey; School of Engineering, Lebanese American University, Byblos, Lebanon.
| | - Fatemeh Aghababaei
- Centre D'Innovació, Recerca I Transferència en Tecnologia Dels Aliments (CIRTTA), TECNIO-UAB, XIA, Departament de Ciència Animal I Dels Aliments, UAB-Campus, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain
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Chai LQ, Li CG, Chai YM, Zhou L. Spectroscopic studies, TD/DFT calculations, electrochemical, antibacterial, and Hirshfeld surface analysis of Ni(II) and Co(III) complexes based on 3-ethoxy salicylaldehyde. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133554] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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Chai L, Chai Y, Zhang X. Two mono‐ and dinuclear Bi (III) complexes combined with crystallographic, spectroscopic, antibacterial activities, MEP/HSA, and TD/DFT calculations. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Lan‐Qin Chai
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
| | - Yong‐Mei Chai
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
| | - Xiao‐Fang Zhang
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
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Chai YM, Zhang HB, Zhang XY, Chai LQ. X-ray structures, spectroscopic, antimicrobial activity, ESP/HSA and TD/DFT calculations of Bi(III) complex containing imidazole ring. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132517] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Chai Y, Li C, Zhang X, Chai L. Antimicrobial activities of two 1‐D, 2‐D and 3‐D mononuclear Mn (II) and dinuclear Bi (III) complexes: X‐ray structures, spectroscopic, ESP, HSA and TD/DFT studies. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6682] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Yong‐Mei Chai
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
| | - Cheng‐Guo Li
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
| | - Xiao‐Fang Zhang
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
| | - Lan‐Qin Chai
- School of Chemistry and Chemical Engineering Lanzhou Jiaotong University Lanzhou China
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