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Yıldırım A, Atmaca U, Şahin E, Taslimi P, Taskin-Tok T, Çelik M, Gülçin İ. The synthesis, carbonic anhydrase and acetylcholinesterase inhibition effects of sulfonyl chloride moiety containing oxazolidinones using an intramolecular aza-Michael addition. J Biomol Struct Dyn 2023:1-16. [PMID: 38100567 DOI: 10.1080/07391102.2023.2291163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 10/26/2023] [Indexed: 12/17/2023]
Abstract
Oxazolidinones are used as various potent antibiotics, in organisms it acts as a protein synthesis inhibitor, focusing on an initial stage that encompasses the tRNA binding process. Novel intramolecular aza-Michael reactions devoid of metal catalysts have been introduced in an oxazolidone synthesis pathway, different from α,β-unsaturated ketones. Oxazolidinone derivatives were tested against acetylcholinesterase (AChE), carbonic anhydrase I and II (hCA I and hCA II) enzymes. All the synthesized compounds had potent inhibition effects with Ki values in the range of 13.57 ± 0.98 - 53.60 ± 6.81 µM against hCA I and 9.96 ± 1.02 - 46.35 ± 3.83 µM against hCA II in comparison to the acetazolamide (AZA) (Ki = 50.46 ± 6.17 µM for hCA I) and for hCA II (Ki = 41.31 ± 5.05 µM). Also, most of the compounds demonstrated potent inhibition ability towards AChE enzyme with Ki values 78.67-231.75 nM and compared to tacrine (TAC) as standard clinical inhibitor (Ki = 142.48 nM). Furthermore, ADMET analysis and molecular docking were calculated using the AChE, hCA I and hCA II enzyme proteins to correlate the data with the experimental data. In this work, recent applications of a stereoselective aza-Michael reaction as an efficient tool for of nitrogen-containing heterocyclic scaffolds and their useful to pharmacology analogs are reviewed and summarized.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Alper Yıldırım
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
| | - Ufuk Atmaca
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
| | - Ertan Şahin
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
| | - Parham Taslimi
- Department of Biotechnology, Faculty of Sciences, Bartin University, Bartin, Turkey
| | - Tugba Taskin-Tok
- Faculty of Arts and Sciences, Department of Chemistry, Gaziantep University, Gaziantep, Turkey
- Department of Bioinformatics and Computational Biology, Institute of Health Sciences, Gaziantep University, Gaziantep, Turkey
| | - Murat Çelik
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
| | - İlhami Gülçin
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
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2
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Chemam Y, Aouf Z, Amira A, K’tir H, Bentoumi H, Ghodbane R, Zerrouki R, Aouf NE. Recent advances in the chemistry of chlorosulfonyl isocyanate: a review. PHOSPHORUS SULFUR 2022. [DOI: 10.1080/10426507.2022.2056738] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Yasmine Chemam
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
| | - Zineb Aouf
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
| | - Aϊcha Amira
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
- National Higher School of Mining and Metallurgy Amar Laskri Annaba, Annaba, Algeria
| | - Hacene K’tir
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
| | - Houria Bentoumi
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
| | - Racha Ghodbane
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
| | - Rachida Zerrouki
- Laboratory of Natural Substances Chemistry, Faculty of Sciences and Technologies, Limoges Cedex, France
| | - Nour-Eddine Aouf
- Bioorganic Chemistry Group, Laboratory of Applied Organic Chemistry, Department of Chemistry, Faculty of Sciences, Badji Mokhtar University, Annaba, Algeria
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3
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Türkeş C, Akocak S, Işık M, Lolak N, Taslimi P, Durgun M, Gülçin İ, Budak Y, Beydemir Ş. Novel inhibitors with sulfamethazine backbone: synthesis and biological study of multi-target cholinesterases and α-glucosidase inhibitors. J Biomol Struct Dyn 2021; 40:8752-8764. [PMID: 33950796 DOI: 10.1080/07391102.2021.1916599] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
The underlying cause of many metabolic diseases is abnormal changes in enzyme activity in metabolism. Inhibition of metabolic enzymes such as cholinesterases (ChEs; acetylcholinesterase, AChE and butyrylcholinesterase, BChE) and α-glucosidase (α-GLY) is one of the accepted approaches in the treatment of Alzheimer's disease (AD) and diabetes mellitus (DM). Here we reported an investigation of a new series of novel ureido-substituted derivatives with sulfamethazine backbone (2a-f) for the inhibition of AChE, BChE, and α-GLY. All the derivatives demonstrated activity in nanomolar levels as AChE, BChE, and α-GLY inhibitors with KI values in the range of 56.07-204.95 nM, 38.05-147.04 nM, and 12.80-79.22 nM, respectively. Among the many strong N-(4,6-dimethylpyrimidin-2-yl)-4-(3-substitutedphenylureido) benzenesulfonamide derivatives (2a-f) detected against ChEs, compound 2c, the 4-fluorophenylureido derivative, demonstrated the most potent inhibition profile towards AChE and BChE. A comprehensive ligand/receptor interaction prediction was performed in silico for the three metabolic enzymes providing molecular docking investigation using Glide XP, MM-GBSA, and ADME-Tox modules. The present research reinforces the rationale behind utilizing inhibitors with sulfamethazine backbone as innovative anticholinergic and antidiabetic agents with a new mechanism of action, submitting propositions for the rational design and synthesis of novel strong inhibitors targeting ChEs and α-GLY.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Cüneyt Türkeş
- Department of Biochemistry, Faculty of Pharmacy, Erzincan Binali Yıldırım University, Erzincan, Turkey
| | - Suleyman Akocak
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Adıyaman University, Adıyaman, Turkey
| | - Mesut Işık
- Department of Bioengineering, Faculty of Engineering, Bilecik Şeyh Edebali University, Bilecik, Turkey
| | - Nebih Lolak
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Adıyaman University, Adıyaman, Turkey
| | - Parham Taslimi
- Department of Biotechnology, Faculty of Science, Bartın University, Bartın, Turkey
| | - Mustafa Durgun
- Department of Chemistry, Faculty of Arts and Sciences, Harran University, Şanlıurfa, Turkey
| | - İlhami Gülçin
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum, Turkey
| | - Yakup Budak
- Department of Chemistry, Faculty of Arts and Sciences, Gaziosmanpaşa University, Tokat, Turkey
| | - Şükrü Beydemir
- Department of Biochemistry, Faculty of Pharmacy, Anadolu University, Eskişehir, Turkey.,The Rectorate of Bilecik Şeyh Edebali University, Bilecik, Turkey
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4
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Tugrak M, Gul HI, Demir Y, Levent S, Gulcin I. Synthesis and in vitro carbonic anhydrases and acetylcholinesterase inhibitory activities of novel imidazolinone-based benzenesulfonamides. Arch Pharm (Weinheim) 2021; 354:e2000375. [PMID: 33283898 DOI: 10.1002/ardp.202000375] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 11/06/2020] [Accepted: 11/13/2020] [Indexed: 02/06/2023]
Abstract
New imidazolinone-based benzenesulfonamides 3a-e and 4a-e were synthesized in three steps and their chemical structures were confirmed by 1 H NMR (nuclear magnetic resonance), 13 C NMR, and high-resolution mass spectrometry. The benzenesulfonamides used were sulfacetamide (3a, 4a), sulfaguanidine (3b, 4b), sulfanilamide (3c, 4c), sulfadiazine (3d, 4d), sulfamerazine (3e), and sulfathiazole (4e). The compounds were evaluated against carbonic anhydrase (CA) and acetylcholinesterase (AChE) enzymes to obtain possible drug candidate/s. The lead compounds of the series were 3a and 4a against human CA (hCA) I, whereas 3d and 4a were leads against hCA II in terms of Ki values. Series 4 includes more effective CAs inhibitors than series 3 (except 3d). Series 4 compounds having a nitro group (except 4d) were 3.3-4.8 times more selective inhibitors than their corresponding analogues 3a-d in series 3, in which hydrogen was located in place of the nitro group, by considering Ki values against hCA II. Compounds 3c and 4c, where the sulfanilamide moiety is available, were the leads in terms of AChE inhibition with the lowest Ki values. The use of secondary sulfonamides was a more effective modification on CA inhibition, whereas the primary sulfonamide was the effective substitution in terms of AChE inhibitory potency.
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Affiliation(s)
- Mehtap Tugrak
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Ataturk University, Erzurum, Turkey
| | - Halise Inci Gul
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Ataturk University, Erzurum, Turkey
| | - Yeliz Demir
- Department of Pharmacy Services, Nihat Delibalta Göle Vocational High School, Ardahan University, Ardahan, Turkey
| | - Serkan Levent
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Anadolu University, Eskişehir, Turkey
| | - Ilhami Gulcin
- Department of Chemistry, Faculty of Science, Ataturk University, Erzurum, Turkey
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Daşgın S, Gök Y, Barut Celepci D, Taslimi P, İzmirli M, Aktaş A, Gülçin İ. Synthesis, characterization, crystal structure and bioactivity properties of the benzimidazole-functionalized PEPPSI type of Pd(II)NHC complexes. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129442] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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6
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Tokalı FS, Taslimi P, Demircioğlu İH, Karaman M, Gültekin MS, Şendil K, Gülçin İ. Design, synthesis, molecular docking, and some metabolic enzyme inhibition properties of novel quinazolinone derivatives. Arch Pharm (Weinheim) 2021; 354:e2000455. [PMID: 33537994 DOI: 10.1002/ardp.202000455] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 01/03/2021] [Accepted: 01/07/2021] [Indexed: 11/07/2022]
Abstract
3-Amino-2-ethylquinazolin-4(3H)-one (3) was synthesized in two steps from the reaction of amide (2), which was obtained from the treatment of methyl anthranilate (1) with propionyl chloride, with hydrazine. From the reaction of 3-amino-2-ethylquinazolin-4(3H)-one (3) with various aromatic aldehydes, novel benzylidenaminoquinazolin-4(3H)-one (3a-n) derivatives were synthesized. The structures of the novel molecules were characterized using infrared spectroscopy, nuclear magnetic resonance spectroscopy (1 H-NMR and 13 C-NMR), and high-resolution mass spectroscopy. The novel compounds were tested against some metabolic enzymes, including α-glucosidase (α-Glu), acetylcholinesterase (AChE), and human carbonic anhydrases I and II (hCA I and II). The novel compounds showed Ki values in the range of 244-988 nM for hCA I, 194-900 nM for hCA II, 30-156 nM for AChE, and 215-625 nM for α-Glu. The binding affinities of the most active compounds were calculated as -7.636, -6.972, -10.080, and -8.486 kcal/mol for hCA I, hCA II, AChE, and α-Glu enzymes, respectively. The aromatic ring of the quinazoline moiety plays a critical role in the inhibition of the enzymes.
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Affiliation(s)
- Feyzi S Tokalı
- Department of Material and Material Processing Technologies, Kars Vocational School, Kafkas University, Kars, Turkey
| | - Parham Taslimi
- Department of Biotechnology, Faculty of Science, Bartin University, Bartin, Turkey
| | | | - Muhammet Karaman
- Department of Molecular Biology and Genetics, Faculty of Arts and Sciences, Kilis 7 Aralik University, Kilis, Turkey
| | - Mehmet S Gültekin
- Department of Chemistry, Faculty of Science, Atatürk University, Erzurum, Turkey
| | - Kıvılcım Şendil
- Department of Chemistry, Faculty of Arts and Sciences, Kafkas University, Kars, Turkey
| | - İlhami Gülçin
- Department of Chemistry, Faculty of Science, Atatürk University, Erzurum, Turkey
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7
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Synthesis, characterization and bioactivities of dative donor ligand N-heterocyclic carbene (NHC) precursors and their Ag(I)NHC coordination compounds. Polyhedron 2021. [DOI: 10.1016/j.poly.2020.114866] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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8
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Demir E, Sari O, Çetinkaya Y, Atmaca U, Sağ Erdem S, Çelik M. One-pot synthesis of oxazolidinones and five-membered cyclic carbonates from epoxides and chlorosulfonyl isocyanate: theoretical evidence for an asynchronous concerted pathway. Beilstein J Org Chem 2020; 16:1805-1819. [PMID: 32765796 PMCID: PMC7385335 DOI: 10.3762/bjoc.16.148] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Accepted: 07/02/2020] [Indexed: 11/23/2022] Open
Abstract
The one-pot reaction of chlorosulfonyl isocyanate (CSI) with epoxides having phenyl, benzyl and fused cyclic alkyl groups in different solvents under mild reaction conditions without additives and catalysts was studied. Oxazolidinones and five-membered cyclic carbonates were obtained in ratios close to 1:1 in the cyclization reactions. The best yields of these compounds were obtained in dichloromethane (DCM). Together with 16 known compounds, two novel oxazolidinone derivatives and two novel cyclic carbonates were synthesized with an efficient and straightforward method. Compared to the existing methods, the synthetic approach presented here provides the following distinct advantageous: being a one-pot reaction with metal-free reagent, having shorter reaction times, good yields and a very simple purification method. Moreover, using the density functional theory (DFT) method at the M06-2X/6-31+G(d,p) level of theory the mechanism of the cycloaddition reactions has been elucidated. The further investigation of the potential energy surfaces associated with two possible channels leading to oxazolidinones and five-membered cyclic carbonates disclosed that the cycloaddition reaction proceeds via an asynchronous concerted mechanism in gas phase and in DCM.
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Affiliation(s)
- Esra Demir
- Department of Chemistry, Faculty of Science, Atatürk University, 25240 Erzurum, Turkey
| | - Ozlem Sari
- Department of Chemistry, Faculty of Arts and Sciences, Kırşehir Ahi Evran University, 40100 Kırşehir, Turkey
| | - Yasin Çetinkaya
- Department of Food Technology, Oltu Vocational School, Atatürk University, 25400 Oltu, Erzurum, Turkey
| | - Ufuk Atmaca
- Department of Chemistry, Faculty of Science, Atatürk University, 25240 Erzurum, Turkey.,Department of Food Technology, Oltu Vocational School, Atatürk University, 25400 Oltu, Erzurum, Turkey
| | - Safiye Sağ Erdem
- Department of Chemistry, Faculty of Arts and Sciences, Marmara University, Goztepe Campus, 34722 Istanbul, Turkey
| | - Murat Çelik
- Department of Chemistry, Faculty of Science, Atatürk University, 25240 Erzurum, Turkey
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9
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Sepehri N, Mohammadi‐Khanaposhtani M, Asemanipoor N, Hosseini S, Biglar M, Larijani B, Mahdavi M, Hamedifar H, Taslimi P, Sadeghian N, Gulcin I. Synthesis, characterization, molecular docking, and biological activities of coumarin–1,2,3‐triazole‐acetamide hybrid derivatives. Arch Pharm (Weinheim) 2020; 353:e2000109. [DOI: 10.1002/ardp.202000109] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Revised: 06/07/2020] [Accepted: 06/09/2020] [Indexed: 12/20/2022]
Affiliation(s)
- Nima Sepehri
- Nano Alvand Company, Avicenna Tech Park Tehran University of Medical Sciences Tehran Iran
| | - Maryam Mohammadi‐Khanaposhtani
- Cellular and Molecular Biology Research Center, Health Research Institute Babol University of Medical Sciences Babol Iran
| | - Nafise Asemanipoor
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute Tehran University of Medical Sciences Tehran Iran
| | - Samanesadat Hosseini
- Department of Pharmaceutical Chemistry, School of Pharmacy Shahid Beheshti University of Medical Sciences Tehran Iran
| | - Mahmood Biglar
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute Tehran University of Medical Sciences Tehran Iran
| | - Bagher Larijani
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute Tehran University of Medical Sciences Tehran Iran
| | - Mohammad Mahdavi
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute Tehran University of Medical Sciences Tehran Iran
| | - Haleh Hamedifar
- CinnaGen Medical Biotechnology Research Center Alborz University of Medical Sciences Karaj Iran
| | - Parham Taslimi
- Department of Biotechnology, Faculty of Science Bartin University Bartin Turkey
| | - Nastaran Sadeghian
- Department of Chemistry, Faculty of Science Ataturk University Erzurum Turkey
| | - Ilhami Gulcin
- Department of Chemistry, Faculty of Science Ataturk University Erzurum Turkey
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10
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Istrefi Q, Türkeş C, Arslan M, Demir Y, Nixha AR, Beydemir Ş, Küfrevioğlu Öİ. Sulfonamides incorporating keteneN,S‐acetal bioisosteres as potent carbonic anhydrase and acetylcholinesterase inhibitors. Arch Pharm (Weinheim) 2020; 353:e1900383. [DOI: 10.1002/ardp.201900383] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 02/28/2020] [Accepted: 03/17/2020] [Indexed: 12/22/2022]
Affiliation(s)
- Qëndresa Istrefi
- Department of Chemistry, Faculty of Mathematical and Natural SciencesUniversity of Prishtina Prishtina, Republic of Kosovo
| | - Cüneyt Türkeş
- Department of Biochemistry, Faculty of PharmacyErzincan Binali Yıldırım University Erzincan Turkey
| | - Mustafa Arslan
- Department of Chemistry, Faculty of Arts and SciencesSakarya University Sakarya Turkey
| | - Yeliz Demir
- Department of Pharmacy Services, Nihat Delibalta Göle Vocational High SchoolArdahan University Ardahan Turkey
| | - Arleta R. Nixha
- Department of Chemistry, Faculty of Mathematical and Natural SciencesUniversity of Prishtina Prishtina, Republic of Kosovo
| | - Şükrü Beydemir
- Department of Biochemistry, Faculty of PharmacyAnadolu University Eskişehir Turkey
| | - Ömer İ. Küfrevioğlu
- Department of Chemistry, Faculty of SciencesAtatürk University Erzurum Turkey
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