Boron-Based Chiral Helix Be6 B10 2- and Be6 B11 - Clusters: Structures, Chemical Bonding, and Formation Mechanism

Be3B11- cluster: a dynamically fluxional beryllo-borospherene

The beryllium-doped Be₃B₁₁^- cluster has two nearly isoenergetic isomers, adopting the smallest trihedral spherical geometries with a boron single-chain skeleton. The B₁₁ skeleton in the global minimum (C_2v, ¹A₁) comprises three conjoined boron rings (one B₈/two B₇) on the waist, sharing two B₃ equilateral triangles at the top and bottom, respectively. However, the local minimum (C_s, ¹A') has one deformed B₄ pyramid at the top. The drastic structural transformation of B₁₁ skeletons from perfectly planar B₁₁ clusters mainly profited from robust electrostatic interaction between Be atoms and B₁₁ skeletons. The dynamic simulations suggest that two species can interconvert via a novel mechanism, that is "triangle-pyramid-triangle", which facilitates the free migration of boron atoms in the B₁₁ skeleton, thereby showing the fascinating dynamic fluxionality. The chemical bonding analyses reveal that the B₁₁ skeleton is covered by two types of delocalized π bonds in an orthogonal direction, which leads to its spherical aromaticity.

A plier-shaped binary molecular wheel B7Mg4+ cluster: hybrid in-plane heptacoordination, double π/σ aromaticity, and electronic transmutation

A plier-shaped charge-transfer [Mg2]2+[Mg2B7]− complex cluster exhibits double 6π/6σ aromaticity, whose hybrid molecular wheel structure is rationalized using the concept of electronic transmutation.

Spatial and electronic structures of BeB8 and MgB8. How far the analogy goes?

Doping of boron clusters with Be and its heavier alkaline-earth congener, Mg usually leads to complexes of different geometry and electronic structure. In this work we showed that both neutral BeB 8 and MgB 8 exhibit a singlet ground state umbrella-like form. In addition, the stability, electronic structure, and aromaticity of the target molecules were compared. The magnetically induced current densities showed that BeB 8 and MgB 8 are double aromatic systems: π and σ electrons induce strong diatropic currents. The current densities induced in the studied complexes are of very similar intensity, but with a different spatial distribution. The found differences between the current density patterns in BeB 8 and MgB 8 arise from the very nature of the bonding interactions between the M atom and B 8 fragment, as demonstrated through the energy decomposition analysis (EDA).

Metallocene: multi-layered molecular rotors

The electronic and structural prerequisites for a multi-layered molecular rotor have been demonstrated herein in terms of nine 18-valence-electron metallocene sandwich complexes. First, the lack of strong covalent bonds between layers is a key issue to obtain a barrier-free rotation of one layer relative to other layers, where the considerable energetic but unidirectional (such as electrostatic interactions) interactions are needed between layers to keep the structural integrity against fragment separation and structural distortion in a rotation process. Second, one or more layers should possess continuous and delocalized π electron clouds to provide a driving force for the barrier-free rotation. More importantly, besides a negligible rotation barrier, the reasonable rotational period associated with the ultra-soft rotation mode is a critical point for the observability of dynamical behavior in multi-layered molecular rotors.

Theoretical Prediction of Structures, Vibrational Circular Dichroism, and Infrared Spectra of Chiral Be4B8 Cluster at Different Temperatures

Lowest-energy structures, the distribution of isomers, and their molecular properties depend significantly on geometry and temperature. Total energy computations using DFT methodology are typically carried out at a temperature of zero K; thereby, entropic contributions to the total energy are neglected, even though functional materials work at finite temperatures. In the present study, the probability of the occurrence of one particular Be4B8 isomer at temperature T is estimated by employing Gibbs free energy computed within the framework of quantum statistical mechanics and nanothermodynamics. To identify a list of all possible low-energy chiral and achiral structures, an exhaustive and efficient exploration of the potential/free energy surfaces is carried out using a multi-level multistep global genetic algorithm search coupled with DFT. In addition, we discuss the energetic ordering of structures computed at the DFT level against single-point energy calculations at the CCSD(T) level of theory. The total VCD/IR spectra as a function of temperature are computed using each isomer's probability of occurrence in a Boltzmann-weighted superposition of each isomer's spectrum. Additionally, we present chemical bonding analysis using the adaptive natural density partitioning method in the chiral putative global minimum. The transition state structures and the enantiomer-enantiomer and enantiomer-achiral activation energies as a function of temperature evidence that a change from an endergonic to an exergonic type of reaction occurs at a temperature of 739 K.

Concentric Inner 2π/6σ and Outer 10π/14σ Aromaticity Underlies the Dynamic Structural Fluxionality of Planar B19- Wankel Motor Cluster

Planar C_2v B₁₉^- global-minimum (GM) cluster is known as a molecular Wankel motor, featuring unique chemical bonding and structural fluxionality. While the geometry, bonding, and molecular dynamics of the cluster are documented in the literature, it remains warranted to fully understand its bonding nature and unravel the mechanism behind the structural dynamics. We shall offer herein an updated bonding model on the bases of canonical molecular orbital (CMO) analysis and adaptive natural density partitioning (AdNDP), further aided by natural bond orbital (NBO) analysis and orbital composition calculations. The computational data indicate that the B₁₉^- cluster has inner 2π/6σ and outer 10π/14σ concentric 4-fold π/σ aromaticity. Being spatially isolated from each other, the inner B₆ disk supports 2π and 6σ subsystems, whereas the outer B₁₈ double-ring ribbon has 10π and 14σ subsystems. All 4-fold π/σ subsystems are intrinsically delocalized and conform to the (4n + 2) Hückel rule for aromaticity. The change of Wiberg bond index (WBI) from GM to transition-state (TS) for radial B-B links is minimal and uniform, which offers a semiquantitative measure of structural dynamics and underlies the low energy barrier.

Exploration of Free Energy Surface and Thermal Effects on Relative Population and Infrared Spectrum of the Be6B11- Flux-Ional Cluster

The starting point to understanding cluster properties is the putative global minimum and all the nearby local energy minima; however, locating them is computationally expensive and difficult. The relative populations and spectroscopic properties that are a function of temperature can be approximately computed by employing statistical thermodynamics. Here, we investigate entropy-driven isomers distribution on Be₆B₁₁⁻ clusters and the effect of temperature on their infrared spectroscopy and relative populations. We identify the vibration modes possessed by the cluster that significantly contribute to the zero-point energy. A couple of steps are considered for computing the temperature-dependent relative population: First, using a genetic algorithm coupled to density functional theory, we performed an extensive and systematic exploration of the potential/free energy surface of Be₆B₁₁⁻ clusters to locate the putative global minimum and elucidate the low-energy structures. Second, the relative populations’ temperature effects are determined by considering the thermodynamic properties and Boltzmann factors. The temperature-dependent relative populations show that the entropies and temperature are essential for determining the global minimum. We compute the temperature-dependent total infrared spectra employing the Boltzmann factor weighted sums of each isomer’s infrared spectrum and find that at finite temperature, the total infrared spectrum is composed of an admixture of infrared spectra that corresponds to the spectra of the lowest-energy structure and its isomers located at higher energies. The methodology and results describe the thermal effects in the relative population and the infrared spectra.

Anchoring a bow-shaped boron single chain in binary Be6B7- cluster: hybrid octagonal ring, multifold π/σ aromaticity, and dual electronic transmutation

Elemental boron clusters do not form linear chain or monocyclic ring structures, which is in contrast to carbon. Based on computer global searches and quantum chemical calculations, we report on the viability of a curved boron single chain in binary Be6B7- cluster. The boron motif assumes a bow shape, being anchored on a Be6 prism. Such a motif, which appears to be highly strained in its free-standing form, is exotic in boron-based clusters and nanostructures. Chemically, the cluster is analogous to a "clam-and-pearl-chain" system at the nanoscale (about 1 nm in size), in which a Be6 clam moderately opens its mouth, except that a B7 pearl chain is too large to be encapsulated inside. The picture differs from a three-layered sandwich. This cluster features a hybrid Be2B7 monocyclic ring, which is octagonal in nature and supports double 10π/6σ aromaticity. The number of π bonds substantially surpasses that in bare boron clusters of similar sizes. Two Be3 rings in the prism are also σ aromatic, albeit with effective 1σ/1σ electron-counting only. The unique multifold 1σ/10π/6σ/1σ aromaticity governs the geometry of the Be6B7- cluster, which can also be rationalized using the concept of dual electronic transmutation.

Are all planar and quasi-planar boron clusters aromatic? Counter examples of island or global π antiaromaticity from chemical bonding analysis

Boron is an electron-deficient element. The flatland of planar or quasi-planar (2D) boron clusters is believed to possess aromaticity for all members, which remains a fundamental issue in debate in boron chemistry. Using a selected set of D_2h B₆^2-, C_2h B₂₈^2-, and C_2v B₂₉^- clusters as counter examples, we shall present computational evidence for global or island π antiaromaticity in 2D boron clusters. The latter two are flattened for the purpose of clarity, which model their quasi-planar C₂ or C_s monoanion clusters observed in prior gas-phase experiments. Chemical bonding in the clusters is elucidated collectively on the basis of canonical molecular orbital (CMO) analysis, adaptive natural density partitioning (AdNDP), electron localization functions (ELFs), and localized molecular orbital (LMO) analysis. These results are complementary to each other and yet highly coherent. As a quantitative indicator, nucleus-independent chemical shifts (NICSs) are calculated at selected specific points in the clusters, which help differentiate between π aromaticity and antiaromaticity. Intriguingly, triangular sites in the same boron cluster can be aromatic, antiaromatic, or nonaromatic, despite the fact that they are physically indistinguishable. The phenomenon is understood in analogy to hydrocarbons and polycyclic aromatic hydrocarbons (PAHs). Even perfect sheet-like boron clusters are convertible to the PAH analogous systems. This work provides compelling examples for global and island π antiaromaticity in the 2D boron clusters.

Singlet and triplet states of the sandwich-type Be2B6 and Be2B7+ clusters. A test for the electron counting rules of aromaticity

The studied complexes exhibit double aromaticity in their triplet states in line with the predictions of Hückel and Baird's rules.