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Burton DF, Boa-Amponsem OM, Dixon MS, Hopkins MJ, Herbin TA, Toney S, Tarpley M, Rodriguez BV, Fish EW, Parnell SE, Cole GJ, Williams KP. Pharmacological activation of the Sonic hedgehog pathway with a Smoothened small molecule agonist ameliorates the severity of alcohol-induced morphological and behavioral birth defects in a zebrafish model of fetal alcohol spectrum disorder. J Neurosci Res 2022; 100:1585-1601. [PMID: 35014067 PMCID: PMC9271529 DOI: 10.1002/jnr.25008] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 12/21/2021] [Accepted: 12/24/2021] [Indexed: 12/17/2022]
Abstract
Ethanol exposure during the early stages of embryonic development can lead to a range of morphological and behavioral differences termed fetal alcohol spectrum disorders (FASDs). In a zebrafish model, we have shown that acute ethanol exposure at 8-10 hr postfertilization (hpf), a critical time of development, produces birth defects similar to those clinically characterized in FASD. Dysregulation of the Sonic hedgehog (Shh) pathway has been implicated as a molecular basis for many of the birth defects caused by prenatal alcohol exposure. We observed in zebrafish embryos that shh expression was significantly decreased by ethanol exposure at 8-10 hpf, while smo expression was much less affected. Treatment of zebrafish embryos with SAG or purmorphamine, small molecule Smoothened agonists that activate Shh signaling, ameliorated the severity of ethanol-induced developmental malformations including altered eye size and midline brain development. Furthermore, this rescue effect of Smo activation was dose dependent and occurred primarily when treatment was given after ethanol exposure. Markers of Shh signaling (gli1/2) and eye development (pax6a) were restored in embryos treated with SAG post-ethanol exposure. Since embryonic ethanol exposure has been shown to produce later-life neurobehavioral impairments, juvenile zebrafish were examined in the novel tank diving test. Our results further demonstrated that in zebrafish embryos exposed to ethanol, SAG treatment was able to mitigate long-term neurodevelopmental impairments related to anxiety and risk-taking behavior. Our results indicate that pharmacological activation of the Shh pathway at specific developmental timing markedly diminishes the severity of alcohol-induced birth defects.
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Affiliation(s)
- Derek F Burton
- Biomanufacturing Research Institute and Technology Enterprise, North Carolina Central University, Durham, North Carolina, USA
| | - Oswald M Boa-Amponsem
- Integrated Biosciences PhD Program, North Carolina Central University, Durham, North Carolina, USA.,Julius L. Chambers Biomedical/Biotechnology Research Institute, North Carolina Central University, Durham, North Carolina, USA
| | - Maria S Dixon
- Biomanufacturing Research Institute and Technology Enterprise, North Carolina Central University, Durham, North Carolina, USA
| | - Michael J Hopkins
- Department of Pharmaceutical Sciences, North Carolina Central University, Durham, North Carolina, USA
| | - Te-Andre Herbin
- Department of Pharmaceutical Sciences, North Carolina Central University, Durham, North Carolina, USA
| | - Shiquita Toney
- Department of Pharmaceutical Sciences, North Carolina Central University, Durham, North Carolina, USA
| | - Michael Tarpley
- Biomanufacturing Research Institute and Technology Enterprise, North Carolina Central University, Durham, North Carolina, USA
| | - Blanca V Rodriguez
- Department of Biochemistry, Duke University, Durham, North Carolina, USA
| | - Eric W Fish
- Bowles Center for Alcohol Studies, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Scott E Parnell
- Bowles Center for Alcohol Studies, University of North Carolina, Chapel Hill, North Carolina, USA.,Department of Cell Biology and Physiology, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Gregory J Cole
- Julius L. Chambers Biomedical/Biotechnology Research Institute, North Carolina Central University, Durham, North Carolina, USA.,Department of Biological and Biomedical Sciences, North Carolina Central University, Durham, North Carolina, USA
| | - Kevin P Williams
- Biomanufacturing Research Institute and Technology Enterprise, North Carolina Central University, Durham, North Carolina, USA.,Department of Pharmaceutical Sciences, North Carolina Central University, Durham, North Carolina, USA
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Bradford YM, Toro S, Ramachandran S, Ruzicka L, Howe DG, Eagle A, Kalita P, Martin R, Taylor Moxon SA, Schaper K, Westerfield M. Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN. ILAR J 2017; 58:4-16. [PMID: 28838067 PMCID: PMC5886338 DOI: 10.1093/ilar/ilw040] [Citation(s) in RCA: 89] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Revised: 12/12/2016] [Accepted: 12/19/2016] [Indexed: 12/18/2022] Open
Abstract
The Zebrafish Model Organism Database (ZFIN; https://zfin.org) is the central resource for genetic, genomic, and phenotypic data for zebrafish (Danio rerio) research. ZFIN continuously assesses trends in zebrafish research, adding new data types and providing data repositories and tools that members of the research community can use to navigate data. The many research advantages and flexibility of manipulation of zebrafish have made them an increasingly attractive animal to model and study human disease.To facilitate disease-related research, ZFIN developed support to provide human disease information as well as annotation of zebrafish models of human disease. Human disease term pages at ZFIN provide information about disease names, synonyms, and references to other databases as well as a list of publications reporting studies of human diseases in which zebrafish were used. Zebrafish orthologs of human genes that are implicated in human disease etiology are routinely studied to provide an understanding of the molecular basis of disease. Therefore, a list of human genes involved in the disease with their corresponding zebrafish ortholog is displayed on the disease page, with links to additional information regarding the genes and existing mutations. Studying human disease often requires the use of models that recapitulate some or all of the pathologies observed in human diseases. Access to information regarding existing and published models can be critical, because they provide a tractable way to gain insight into the phenotypic outcomes of the disease. ZFIN annotates zebrafish models of human disease and supports retrieval of these published models by listing zebrafish models on the disease term page as well as by providing search interfaces and data download files to access the data. The improvements ZFIN has made to annotate, display, and search data related to human disease, especially zebrafish models for disease and disease-associated gene information, should be helpful to researchers and clinicians considering the use of zebrafish to study human disease.
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Affiliation(s)
- Yvonne M. Bradford
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Sabrina Toro
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Sridhar Ramachandran
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Leyla Ruzicka
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Douglas G. Howe
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Anne Eagle
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Patrick Kalita
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Ryan Martin
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Sierra A. Taylor Moxon
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Kevin Schaper
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
| | - Monte Westerfield
- Yvonne M. Bradford, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sabrina Toro, PhD, is a scientific curator for the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sridhar Ramachandran, MS, is a scientific curator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Leyla Ruzicka, PhD, is a scientific curator and senior research associate at the Zebrafish Model Organism Database, at the University of Oregon in Eugene, Oregon. Douglas G. Howe, PhD, is the Data Curation Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Anne Eagle, MSCS, is the Software Development and Project Manager at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Patrick Kalita, MS, is a software developer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Ryan Martin, MS, is a systems administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Sierra A. Taylor Moxon, BA, is the Database Administrator at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Kevin Schaper, BS, is a software engineer at the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon. Monte Westerfield, PhD, is a Professor of Biology in the Institute of Neuroscience and directs the Zebrafish Model Organism Database at the University of Oregon in Eugene, Oregon.
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