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Bedi N, Srivastava DK, Srivastava A, Mahapatra S, Dkhar DS, Chandra P, Srivastava A. Marine Biological Macromolecules as Matrix Material for Biosensor fabrication. Biotechnol Bioeng 2022; 119:2046-2063. [PMID: 35470439 DOI: 10.1002/bit.28122] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Revised: 04/19/2022] [Accepted: 04/23/2022] [Indexed: 11/06/2022]
Abstract
The Ocean covers two-third of our planet and has great biological heterogeneity. Marine organisms like algae, vertebrates, invertebrates, and microbes are known to provide many natural products with biological activities as well as potent sources of biomaterials for therapeutic, biomedical, biosensors, and climate stabilization. Over the years, the field of biosensors have gained huge attention due to their extraordinary ability to provide early disease diagnosis, rapid detection of various molecules and substances along with long term monitoring. This review aims to focus on the properties and employment of various biomaterials (Carbohydrate polymers, proteins, polyacids etc) of marine origin such as Alginate, Chitin, Chitosan, Fucoidan, Carrageenan, Chondroitin Sulfate (CS), Hyaluronic acid (HA), Collagen, marine pigments, marine nanoparticles, Hydroxyapatite (HAp), Biosilica, lectins, and marine whole cell in the design and development of biosensors. Further, this review also covers the source of such marine biomaterials and their promising evolution in the fabrication of biosensors that are potent to be employed in the biomedical, environmental science and agricultural sciences domains. The use of such fabricated biosensors harness the system with excellent specificity, selectivity, biocompatibility, thermally stable and minimal cost advantages. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Namita Bedi
- Amity Institute of Biotechnology, Amity University Uttar Pradesh, Sector 125, Noida, India
| | | | - Arti Srivastava
- Amity Institute of Biotechnology, Amity University Uttar Pradesh, Sector 125, Noida, India
| | - Supratim Mahapatra
- Laboratory of Bio-Physio Sensors and Nanobiotechnology, School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi, Uttar Pradesh, India
| | - Daphika S Dkhar
- Laboratory of Bio-Physio Sensors and Nanobiotechnology, School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi, Uttar Pradesh, India
| | - Pranjal Chandra
- Laboratory of Bio-Physio Sensors and Nanobiotechnology, School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi, Uttar Pradesh, India
| | - Ashutosh Srivastava
- Amity Institute of Biotechnology, Amity University Uttar Pradesh, Sector 125, Noida, India.,Amity Institute of Marine Science and Technology, Amity University Uttar Pradesh, Sector 125, Noida, India
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Numerical modeling of the dynamic response of a bioluminescent bacterial biosensor. Anal Bioanal Chem 2016; 408:8761-8770. [DOI: 10.1007/s00216-016-9490-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Revised: 03/02/2016] [Accepted: 03/14/2016] [Indexed: 10/22/2022]
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Jia K, Ionescu RE. Measurement of Bacterial Bioluminescence Intensity and Spectrum: Current Physical Techniques and Principles. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2015; 154:19-45. [PMID: 25981856 DOI: 10.1007/10_2015_324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Abstract
: Bioluminescence is light production by living organisms, which can be observed in numerous marine creatures and some terrestrial invertebrates. More specifically, bacterial bioluminescence is the "cold light" produced and emitted by bacterial cells, including both wild-type luminescent and genetically engineered bacteria. Because of the lively interplay of synthetic biology, microbiology, toxicology, and biophysics, different configurations of whole-cell biosensors based on bacterial bioluminescence have been designed and are widely used in different fields, such as ecotoxicology, food toxicity, and environmental pollution. This chapter first discusses the background of the bioluminescence phenomenon in terms of optical spectrum. Platforms for bacterial bioluminescence detection using various techniques are then introduced, such as a photomultiplier tube, charge-coupled device (CCD) camera, micro-electro-mechanical systems (MEMS), and complementary metal-oxide-semiconductor (CMOS) based integrated circuit. Furthermore, some typical biochemical methods to optimize the analytical performances of bacterial bioluminescent biosensors/assays are reviewed, followed by a presentation of author's recent work concerning the improved sensitivity of a bioluminescent assay for pesticides. Finally, bacterial bioluminescence as implemented in eukaryotic cells, bioluminescent imaging, and cancer cell therapies is discussed.
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Affiliation(s)
- Kun Jia
- Laboratoire de Nanotechnologie et d'Instrumentation Optique, Institut Charles Delaunay, Université de Technologie de Troyes, UMR CNRS 6281, 12 rue Marie Curie CS 42060, TROYES, 10004 Cedex, France
| | - Rodica Elena Ionescu
- Laboratoire de Nanotechnologie et d'Instrumentation Optique, Institut Charles Delaunay, Université de Technologie de Troyes, UMR CNRS 6281, 12 rue Marie Curie CS 42060, TROYES, 10004 Cedex, France.
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Liu Z, Zhao J, Liang X, Li K, Xiao X, Zhu J, Sun Q, Liang Q. Characterization of luminescent Vibrio campbellii LZ5 and its potential application in the detection of environmental heavy metals. Biotechnol Appl Biochem 2012; 59:405-10. [PMID: 23586948 DOI: 10.1002/bab.1040] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2012] [Accepted: 08/19/2012] [Indexed: 11/12/2022]
Abstract
A luminescent strain was isolated and identified as Vibrio campbellii strain LZ5 by 16S rDNA analysis. It grew well in broad living conditions, and the relative fluorescence intensity was stable at pH ranging from 5 to 7.5, NaCl concentrations from 0% to 3%, KCl from 1.5% to 5%, and CaCl₂ from 1% to 3%. In contrast, the relative fluorescence intensity was negatively correlated with both CdCl₂ and HgCl₂ concentrations from 0 to 1 mg/L. The luminescent fraction from the cell lysate was purified by ion-exchange chromatography, and identified as a luciferase by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry. Furthermore, the biofilm of V. campbellii LZ5 was formed constantly under different conditions, and was not affected by heavy metal ions. The data collectively reveal that strain LZ5 has the potential to be developed into a biosensor for real-time monitoring of heavy metals.
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Affiliation(s)
- Zhu Liu
- Department of Biology, Shantou University, Shantou, Guangdong, People's Republic of China
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Functional characterization of Edwardsiella tarda twin-arginine translocation system and its potential use as biological containment in live attenuated vaccine of marine fish. Appl Microbiol Biotechnol 2012; 97:3545-57. [DOI: 10.1007/s00253-012-4462-9] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Revised: 09/07/2012] [Accepted: 09/20/2012] [Indexed: 11/25/2022]
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Charrier T, Durand MJ, Jouanneau S, Dion M, Pernetti M, Poncelet D, Thouand G. A multi-channel bioluminescent bacterial biosensor for the on-line detection of metals and toxicity. Part I: design and optimization of bioluminescent bacterial strains. Anal Bioanal Chem 2010; 400:1051-60. [PMID: 21069300 DOI: 10.1007/s00216-010-4353-9] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2010] [Revised: 10/11/2010] [Accepted: 10/18/2010] [Indexed: 11/30/2022]
Abstract
This study describes the construction of inducible bioluminescent strains via genetic engineering along with their characterization and optimization in the detection of heavy metals. Firstly, a preliminary comparative study enabled us to select a suitable carbon substrate from pyruvate, glucose, citrate, diluted Luria-Bertani, and acetate. The latter carbon source provided the best induction ratios for comparison. Results showed that the three constructed inducible strains, Escherichia coli DH1 pBzntlux, pBarslux, and pBcoplux, were usable when conducting a bioassay after a 14-h overnight culture at 30 °C. Utilizing these sensors gave a range of 12 detected heavy metals including several cross-detections. Detection limits for each metal were often close to and sometimes lower than the European standards for water pollution. Finally, in order to maintain sensitive bacteria within the future biosensor-measuring cell, the agarose immobilization matrix was compared to polyvinyl alcohol (PVA). Agarose was selected because the detection limits of the bioluminescent strains were not affected, in contrast to PVA. Specific detection and cross-detection ranges determined in this study will form the basis of a multiple metals detection system by the new multi-channel Lumisens3 biosensor.
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Affiliation(s)
- Thomas Charrier
- Nantes University, PRES UNAM, Campus de la Courtaisière-IUT, UMR CNRS GEPEA, CBAC, La Roche-sur-Yon, France
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Close DM, Ripp S, Sayler GS. Reporter proteins in whole-cell optical bioreporter detection systems, biosensor integrations, and biosensing applications. SENSORS (BASEL, SWITZERLAND) 2009; 9:9147-74. [PMID: 22291559 PMCID: PMC3260636 DOI: 10.3390/s91109147] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/18/2009] [Revised: 10/14/2009] [Accepted: 10/23/2009] [Indexed: 11/19/2022]
Abstract
Whole-cell, genetically modified bioreporters are designed to emit detectable signals in response to a target analyte or related group of analytes. When integrated with a transducer capable of measuring those signals, a biosensor results that acts as a self-contained analytical system useful in basic and applied environmental, medical, pharmacological, and agricultural sciences. Historically, these devices have focused on signaling proteins such as green fluorescent protein, aequorin, firefly luciferase, and/or bacterial luciferase. The biochemistry and genetic development of these sensor systems as well as the advantages, challenges, and common applications of each one will be discussed.
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Affiliation(s)
- Dan M. Close
- The University of Tennessee, The Center for Environmental Biotechnology, 676 Dabney Hall, Knoxville, Tennessee, 37996, USA; E-Mails: (D.C.); (S.R.)
| | - Steven Ripp
- The University of Tennessee, The Center for Environmental Biotechnology, 676 Dabney Hall, Knoxville, Tennessee, 37996, USA; E-Mails: (D.C.); (S.R.)
| | - Gary S. Sayler
- The University of Tennessee, The Center for Environmental Biotechnology, 676 Dabney Hall, Knoxville, Tennessee, 37996, USA; E-Mails: (D.C.); (S.R.)
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Deryabin DG, Karimov IF. Simultaneous evaluation of chemiluminescence and bioluminescence in a phagocytic system. Bull Exp Biol Med 2009; 147:349-52. [PMID: 19529859 DOI: 10.1007/s10517-009-0506-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
The spectra of luminol-dependent chemiluminescence of leukocytes, forming as a result of their oxygen-dependent bactericidal systems activation, and bacterial bioluminescence of Escherichia coli recombinant strain with cloned lux operon, used as the object of phagocytosis, are not identical. Mutual overlapping of these spectra reaches 87%, including overlapping of the photoemission maximums. However these spectra can be evaluated separately in the short-wave "arm" of the chemiluminescence spectrum (<420 nm) and the long-wave "arm" of the bioluminescence spectrum (>560). The kinetics of luminol-dependent chemiluminescence of phagocytes and of bacterial bioluminescence in their mixtures is characterized by mutually dependent phase-wise changes in the intensity of the analyzed parameters.
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Horry H, Durand MJ, Picart P, Bendriaa L, Daniel P, Thouand G. Development of a biosensor for the detection of tributyltin. ENVIRONMENTAL TOXICOLOGY 2004; 19:342-345. [PMID: 15269905 DOI: 10.1002/tox.20030] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A biosensor (LUMISENS I), based on the inducible bioluminescence of the Escherichia coli strain TBT3 (Ec::luxAB TBT3), was developed for the detection of the biocide tributyltin. LUMISENS I was set up with a minibioreactor and additional equipment for growth monitoring and light acquisition. The 100-mL minibioreactor has allowed us to establish a stable and reproducible environment for the bacteria (regulation of the growth rate, temperature, pH, and oxygenation), as well as for in situ contact with the xenobiotic. The optical components of the transducer were chosen according to the spectral emission of the strain being studied using a highly sensitive spectrophotometer that was initially devoted to Raman scattering. LUMISENS I was patented according to the in situ, automatic, and simultaneous measurement of the cell density and bioluminescence in the bioreactor. The first results showed that cells cultivated in a synthetic glucose medium provided a better detection limit than did those cultivated in a complex Luria-Bertani (LB) medium (0.02 and 1.5 microM of tributyltin, respectively). Cells maintained at a high growth rate (0.9 h(-1)) led to maximum bioluminescence. Moreover, air bubbling was efficient enough to provide suitable quantities of oxygen for both growth and light emission. When the TBT3 strain used the luxAB genes on its own, decanal, a long-chain aldehyde, had to be added to obtain the bioluminescence reaction. We found that the continuous addition of decanal was the most effective means of obtaining this reaction. The monitoring of the bioluminescence after tributyltin induction showed that the aldehyde was not toxic up to 300 microM during a 7-day experiment. Measurement of tributyltin with LUMISENS I was performed, which showed significant response up to 0.125 microM without any effect on optical density. Even though optimization of the performance of LUMISENS I is still under development, because of its original design, this biosensor is already in use as a warning system for the online monitoring of tributyltin.
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Affiliation(s)
- Habib Horry
- Université de Nantes, Campus de la Courtaisière-IUT, département Génie Biologique, UMR CNRS 6144 GEPEA, ERT CBAC, 18 Bd G. Defferre, 85035 La Roche-sur-Yon, France
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