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Fokin AA. Long but Strong C-C Single Bonds: Challenges for Theory. CHEM REC 2024; 24:e202300170. [PMID: 37358335 DOI: 10.1002/tcr.202300170] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 06/02/2023] [Indexed: 06/27/2023]
Abstract
Theoretical challenges in describing molecules with anomalously long single C-C bonds are analyzed in terms of the relative contributions of stabilizing and destabilizing intramolecular interactions. Diamondoid dimers that are stable despite the presence of C-C bonds up to 1.7 Å long, as well as other bulky molecules stabilized due to intramolecular noncovalent interactions (London dispersions) are discussed. The unexpected stability of highly crowded molecules, such as diamondoid dimers and tert-butyl-substituted hexaphenylethanes, calls for reconsideration of the "steric effect" traditionally thought to destabilize the molecule. Alternatively, "steric attraction" helps to understand bonding in sterically overloaded molecules, whose structural and energetic analysis requires a proper theoretical description of noncovalent interactions.
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Affiliation(s)
- Andrey A Fokin
- Department of Organic Chemistry, Igor Sikorsky Kyiv Polytechnic Institute, Beresteiskyi Ave 37, Kyiv, Ukraine
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2
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Yost SR, Head-Gordon M. Efficient Implementation of NOCI-MP2 Using the Resolution of the Identity Approximation with Application to Charged Dimers and Long C–C Bonds in Ethane Derivatives. J Chem Theory Comput 2018; 14:4791-4805. [DOI: 10.1021/acs.jctc.8b00697] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shane R. Yost
- Department of Chemistry and Biochemistry, Texas State University, San Marcos, Texas 78666, United States
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Martin Head-Gordon
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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Allinger NL, Lii JH, Schaefer HF. Molecular Mechanics (MM4) Studies on Unusually Long Carbon-Carbon Bond Distances in Hydrocarbons. J Chem Theory Comput 2016; 12:2774-8. [PMID: 27164310 DOI: 10.1021/acs.jctc.5b00926] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The carbon-carbon single bond is of central importance in organic chemistry. When the molecular mechanics MM4 force field was developed beginning in the early 1990s, C-C bond lengths were not known very reliably for many important molecules, and bond lengths greater than 1.6 Å were quite poorly known experimentally. Quantum-mechanically computed values could not yet be obtained with useful accuracy in a general way. This paper examines structures now available from experiment and quantum-mechanical computations and extends the fit of the MM4 methodology to include new bond distances as long as 1.71 Å.
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Affiliation(s)
- Norman L Allinger
- Center for Computational Chemistry, University of Georgia , Athens, Georgia 30602, United States
| | - Jenn-Huei Lii
- CNC Gelcaps Corporation , No. 1205 Zhongzheng Road, Caotun Township, Nantou County 54254, Taiwan
| | - Henry F Schaefer
- Center for Computational Chemistry, University of Georgia , Athens, Georgia 30602, United States
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Wagner JP, Schreiner PR. London’sche Dispersionswechselwirkungen in der Molekülchemie - eine Neubetrachtung sterischer Effekte. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201503476] [Citation(s) in RCA: 190] [Impact Index Per Article: 21.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Wagner JP, Schreiner PR. London dispersion in molecular chemistry--reconsidering steric effects. Angew Chem Int Ed Engl 2015; 54:12274-96. [PMID: 26262562 DOI: 10.1002/anie.201503476] [Citation(s) in RCA: 638] [Impact Index Per Article: 70.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2015] [Indexed: 12/15/2022]
Abstract
London dispersion, which constitutes the attractive part of the famous van der Waals potential, has long been underappreciated in molecular chemistry as an important element of structural stability, and thus affects chemical reactivity and catalysis. This negligence is due to the common notion that dispersion is weak, which is only true for one pair of interacting atoms. For increasingly larger structures, the overall dispersion contribution grows rapidly and can amount to tens of kcal mol(-1) . This Review collects and emphasizes the importance of inter- and intramolecular dispersion for molecules consisting mostly of first row atoms. The synergy of experiment and theory has now reached a stage where dispersion effects can be examined in fine detail. This forces us to reconsider our perception of steric hindrance and stereoelectronic effects. The quantitation of dispersion energy donors will improve our ability to design sophisticated molecular structures and much better catalysts.
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Affiliation(s)
- J Philipp Wagner
- Institute of Organic Chemistry, Justus-Liebig University, Heinrich-Buff-Ring 58, 35392 Giessen (Germany)
| | - Peter R Schreiner
- Institute of Organic Chemistry, Justus-Liebig University, Heinrich-Buff-Ring 58, 35392 Giessen (Germany).
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Mohapatra SK, Fonari A, Risko C, Yesudas K, Moudgil K, Delcamp JH, Timofeeva TV, Brédas JL, Marder SR, Barlow S. Dimers of Nineteen-Electron Sandwich Compounds: Crystal and Electronic Structures, and Comparison of Reducing Strengths. Chemistry 2014; 20:15385-94. [DOI: 10.1002/chem.201404007] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Indexed: 11/11/2022]
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Edkins RM, Probert MR, Robertson CM, Howard JAK, Beeby A. Photocrystallisation of the 2C–2′C dimer of a triphenylimidazolyl radical. RSC Adv 2014. [DOI: 10.1039/c3ra43892a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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Fokin AA, Chernish LV, Gunchenko PA, Tikhonchuk EY, Hausmann H, Serafin M, Dahl JEP, Carlson RMK, Schreiner PR. Stable alkanes containing very long carbon-carbon bonds. J Am Chem Soc 2012; 134:13641-50. [PMID: 22835264 DOI: 10.1021/ja302258q] [Citation(s) in RCA: 145] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The metal-induced coupling of tertiary diamondoid bromides gave highly sterically congested hydrocarbon (hetero)dimers with exceptionally long central C-C bonds of up to 1.71 Å in 2-(1-diamantyl)[121]tetramantane. Yet, these dimers are thermally very stable even at temperatures above 200 °C, which is not in line with common C-C bond length versus bond strengths correlations. We suggest that the extraordinary stabilization arises from numerous intramolecular van der Waals attractions between the neighboring H-terminated diamond-like surfaces. The C-C bond rotational dynamics of 1-(1-adamantyl)diamantane, 1-(1-diamantyl)diamantane, 2-(1-adamantyl)triamantane, 2-(1-diamantyl)triamantane, and 2-(1-diamantyl)[121]tetramantane were studied through variable-temperature (1)H- and (13)C NMR spectroscopies. The shapes of the inward (endo) CH surfaces determine the dynamic behavior, changing the central C-C bond rotation barriers from 7 to 33 kcal mol(-1). We probe the ability of popular density functional theory (DFT) approaches (including BLYP, B3LYP, B98, B3LYP-Dn, B97D, B3PW91, BHandHLYP, B3P86, PBE1PBE, wB97XD, and M06-2X) with 6-31G(d,p) and cc-pVDZ basis sets to describe such an unusual bonding situation. Only functionals accounting for dispersion are able to reproduce the experimental geometries, while most DFT functionals are able to reproduce the experimental rotational barriers due to error cancellations. Computations on larger diamondoids reveal that the interplay between the shapes and the sizes of the CH surfaces may even allow the preparation of open-shell alkyl radical dimers (and possibly polymers) that are strongly held together exclusively by dispersion forces.
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Affiliation(s)
- Andrey A Fokin
- Department of Organic Chemistry, Kiev Polytechnic Institute, pr. Pobedy 37, 03056 Kiev, Ukraine.
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Schreiner PR, Chernish LV, Gunchenko PA, Tikhonchuk EY, Hausmann H, Serafin M, Schlecht S, Dahl JEP, Carlson RMK, Fokin AA. Overcoming lability of extremely long alkane carbon-carbon bonds through dispersion forces. Nature 2011; 477:308-11. [PMID: 21921913 DOI: 10.1038/nature10367] [Citation(s) in RCA: 319] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2011] [Accepted: 07/15/2011] [Indexed: 11/09/2022]
Abstract
Steric effects in chemistry are a consequence of the space required to accommodate the atoms and groups within a molecule, and are often thought to be dominated by repulsive forces arising from overlapping electron densities (Pauli repulsion). An appreciation of attractive interactions such as van der Waals forces (which include London dispersion forces) is necessary to understand chemical bonding and reactivity fully. This is evident from, for example, the strongly debated origin of the higher stability of branched alkanes relative to linear alkanes and the possibility of constructing hydrocarbons with extraordinarily long C-C single bonds through steric crowding. Although empirical bond distance/bond strength relationships have been established for C-C bonds (longer C-C bonds have smaller bond dissociation energies), these have no present theoretical basis. Nevertheless, these empirical considerations are fundamental to structural and energetic evaluations in chemistry, as summarized by Pauling as early as 1960 and confirmed more recently. Here we report the preparation of hydrocarbons with extremely long C-C bonds (up to 1.704 Å), the longest such bonds observed so far in alkanes. The prepared compounds are unexpectedly stable--noticeable decomposition occurs only above 200 °C. We prepared the alkanes by coupling nanometre-sized, diamond-like, highly rigid structures known as diamondoids. The extraordinary stability of the coupling products is due to overall attractive dispersion interactions between the intramolecular H•••H contact surfaces, as is evident from density functional theory computations with and without inclusion of dispersion corrections.
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Affiliation(s)
- Peter R Schreiner
- Institut für Organische Chemie der Justus-Liebig-Universität, Heinrich-Buff-Ring 58, D-35392 Giessen, Germany.
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Klankermayer J, Gridnev ID, Brown JM. Role of the isopropyl group in asymmetric autocatalytic zinc alkylations. Chem Commun (Camb) 2007:3151-3. [PMID: 17653371 DOI: 10.1039/b705978g] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The amplifying asymmetric autocatalysis discovered by Soai and co-workers is dependent on the unique steric properties of the isopropyl group.
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Affiliation(s)
- Jürgen Klankermayer
- Institut für Technische und Makromolekulare Chemie (ITMC), RWTH Aachen University, 52074 Aachen, Germany.
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Li B, Wang B, Xu S, Zhou X. Synthesis and structures of dinuclear iron, molybdenum and tungsten complexes derived from (PhCHCHPh)-coupled bis(cyclopentadiene). J Organomet Chem 2005. [DOI: 10.1016/j.jorganchem.2005.05.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Brunker TJ, Arisandy C, Cowley AR, Rees LH, Barlow S, O’Hare D. Synthesis, structures and reactions of some metallocene alcohols. J Organomet Chem 2004. [DOI: 10.1016/j.jorganchem.2003.10.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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13
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Ermer O, Bell P, Schäfer J, Szeimies G. Shortened CC Bonds in Coupled Bicyclo[1.1.0]butanes. ACTA ACUST UNITED AC 2003. [DOI: 10.1002/anie.198904731] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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14
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Rüchardt C, Beckhaus HD. Consequences of Strain for the Structure of Aliphatic Molecules. ACTA ACUST UNITED AC 2003. [DOI: 10.1002/anie.198505293] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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15
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Zavitsas AA. The Relation between Bond Lengths and Dissociation Energies of Carbon−Carbon Bonds. J Phys Chem A 2003. [DOI: 10.1021/jp0269367] [Citation(s) in RCA: 152] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Andreas A. Zavitsas
- Department of Chemistry and Biochemistry, Long Island University, University Plaza, Brooklyn, New York 11201
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Li PC, Wang TS, Lee GH, Liu YH, Wang Y, Chen CT, Chao I. Theoretical study and X-ray determination of bianthronyl [corrected] : long C-C bond length and preferred gauche conformation. J Org Chem 2002; 67:8002-9. [PMID: 12423127 DOI: 10.1021/jo020196g] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Five X-ray crystallographic structures of bianthronyl (1, 2b-5b) revealed the presence of long central C(sp3)-C(sp3) bonds (> or =1.60 A) and mostly gauche conformation. DFT calculations were carried out to study the structural features of bianthronyl and related model molecules [corrected]. Our B3LYP/6-31G gas-phase calculation results suggest that steric effect plays a role in causing the long C-C sigma bond length (>1.60 A), nonplanarity of the anthracenone moiety (>20 degrees ), and preferred gauche conformation. However, when the gauche preference is weak, environmental effects such as solvation and packing forces can reverse it. As the degree of nonplanarity of the anthracenone moiety is consistently larger in the anti conformation than in the gauche and the ease of achieving nonplanarity is determined by flexibility of the central six-membered rings directly connected to the C(sp3)-C(sp3) bond, one way to control the structure and anti-gauche energy difference of closely related compounds is by changing the clamping group (Z) in the central six-membered ring.
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Affiliation(s)
- Pai-Chi Li
- Department of Chemistry, National Taiwan University, Taipei, Taiwan, R.O.C
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Tacke M, Dunne JP, Fox S, Linti G, Teuber R. The synthesis, X-ray and DFT structures of the free ansa–cyclopentadiene ligand C5H5CMe2CMe2C5H5. J Mol Struct 2001. [DOI: 10.1016/s0022-2860(01)00513-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Schmittel M, Keller M, Kiau S, Strittmatter M. A Surprising Switch from the Myers–Saito Cyclization to a Novel Biradical Cyclization in Enyne–Allenes: Formal Diels–Alder and Ene Reactions with High Synthetic Potential. Chemistry 1997. [DOI: 10.1002/chem.19970030521] [Citation(s) in RCA: 91] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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21
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Schmittel M, Strittmatter M, Kiau S. Eine neue Diradikal-Cyclisierung als Alternative zur Myers-Saito-Cycloaromatisierung bei der thermischen Umsetzung von Eninallenen. Angew Chem Int Ed Engl 1996. [DOI: 10.1002/ange.19961081618] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Wadepohl H, Lieth CWVD, Paffen FJ, Pritzkow H. (C5H5)Co-Induced Head-Head Coupling of Dimethylfulvene: Formation, Molecular Structure and Electrochemistry of (1,1,2,2-Tetramethyl-1,2-ethanediyl)bis(cobaltocene). ACTA ACUST UNITED AC 1995. [DOI: 10.1002/cber.19951280317] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Vögtle F, Dohm J, Rissanen K. Das erste verklammerte und stark deformierte Adamantan. Angew Chem Int Ed Engl 1990. [DOI: 10.1002/ange.19901020826] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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25
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Ermer O, Bell P, Schäfer J, Szeimies G. Verkürzte CC-Bindungen in gekuppelten Bicyclo[1.1.0]butanen. Angew Chem Int Ed Engl 1989. [DOI: 10.1002/ange.19891010434] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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26
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Meier M, Rüchardt C. The Synthetic Potential of the Isocyanide-Cyanide Rearrangement. ACTA ACUST UNITED AC 1987. [DOI: 10.1002/cber.19871200102] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Bernlöhr W, Flamm-ter Meer MA, Kaiser JH, Schmittel M, Beckhaus HD, Rüchardt C. Aliphatic azo compounds, XV.cis- andtrans-tetracyclopropyl- and tetra-tert-butylazomethanes. ACTA ACUST UNITED AC 1986. [DOI: 10.1002/cber.19861190613] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Flamm-ter Meer MA, Beckhaus HD, Peters K, von Schnering HG, Fritz H, Rüchardt C. Thermolabile hydrocarbons, XXVIII. Separation, structure analysis, and thermolysis of a pair of stable rotamers; P-(R*,R*)- and M-(R*,R*)-D,L-3,4-di-1-adamantyl-2,2,5,5-tetramethylhexane. ACTA ACUST UNITED AC 1986. [DOI: 10.1002/cber.19861190506] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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