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Arruda HS, Angolini CFF, Eberlin MN, Pastore GM, Marostica Junior MR. UHPLC-ESI-QTOF-MS/MS Profiling of Phytochemicals from Araticum Fruit ( Annona crassiflora Mart.) and Its Antioxidant Activity. Foods 2023; 12:3456. [PMID: 37761165 PMCID: PMC10528599 DOI: 10.3390/foods12183456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Revised: 09/09/2023] [Accepted: 09/14/2023] [Indexed: 09/29/2023] Open
Abstract
Araticum is a native species of the Brazilian Cerrado with a high potential for exploitation. Several studies have stated that araticum is a rich source of phytochemicals with multifaceted biological actions. However, little information is available regarding the characterization of phytochemicals found in the pulp of this fruit. In this context, this study aimed to carry out a comprehensive characterization of phytochemicals present in the araticum pulp using ultra-high-performance liquid chromatography coupled to a quadrupole time-of-flight mass spectrometer (UHPLC-ESI-QTOF-MS/MS). The antioxidant potential of araticum pulp was also evaluated. UHPLC-ESI-QTOF-MS/MS profiling of the phytochemicals allowed for the identification and annotation of 139 phytochemicals, including organic acids, jasmonates, iridoids, phenolic compounds, alkaloids, annonaceous acetogenins, fatty acid derivatives, and other compounds. Among them, 116 compounds have been found for the first time in araticum pulp. Phenolic compounds and their derivatives represented about 59% of the phytochemicals identified in the extract. Moreover, araticum pulp showed high total phenolic compound content and antioxidant activity. The majority of identified phytochemicals have been associated with key roles in the plant's defense mechanisms against biotic and abiotic stress factors in the Cerrado environment. Furthermore, many of these phytochemicals found in the araticum pulp are already widely recognized for their beneficial effects on human health. Our findings showed that the araticum fruit contains different classes of phytochemicals that exert various biological activities, both in the plant itself and in humans.
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Affiliation(s)
- Henrique Silvano Arruda
- Department of Food Science and Nutrition, School of Food Engineering, University of Campinas, Rua Monteiro Lobato 80, Campinas 13083-862, São Paulo, Brazil; (G.M.P.); (M.R.M.J.)
| | - Célio Fernando Figueiredo Angolini
- Institute of Chemistry, University of Campinas, Rua Josué de Castro s/n, Campinas 13083-970, São Paulo, Brazil; (C.F.F.A.); (M.N.E.)
- Center for Natural and Human Sciences, Federal University of ABC, Avenida dos Estados 5001, Santo André 09210-580, São Paulo, Brazil
| | - Marcos Nogueira Eberlin
- Institute of Chemistry, University of Campinas, Rua Josué de Castro s/n, Campinas 13083-970, São Paulo, Brazil; (C.F.F.A.); (M.N.E.)
- MackMass Laboratory for Mass Spectrometry, School of Engineering, PPGEMN & Mackenzie Institute of Research in Graphene and Nanotechnologies, Mackenzie Presbyterian University, Rua da Consolação 896, São Paulo 01302-907, São Paulo, Brazil
| | - Glaucia Maria Pastore
- Department of Food Science and Nutrition, School of Food Engineering, University of Campinas, Rua Monteiro Lobato 80, Campinas 13083-862, São Paulo, Brazil; (G.M.P.); (M.R.M.J.)
| | - Mario Roberto Marostica Junior
- Department of Food Science and Nutrition, School of Food Engineering, University of Campinas, Rua Monteiro Lobato 80, Campinas 13083-862, São Paulo, Brazil; (G.M.P.); (M.R.M.J.)
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Li JK, Qu G, Li X, Tian Y, Cui C, Zhang FG, Zhang W, Ma JA, Reetz MT, Sun Z. Rational enzyme design for enabling biocatalytic Baldwin cyclization and asymmetric synthesis of chiral heterocycles. Nat Commun 2022; 13:7813. [PMID: 36535947 PMCID: PMC9763437 DOI: 10.1038/s41467-022-35468-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Accepted: 12/05/2022] [Indexed: 12/23/2022] Open
Abstract
Chiral heterocyclic compounds are needed for important medicinal applications. We report an in silico strategy for the biocatalytic synthesis of chiral N- and O-heterocycles via Baldwin cyclization modes of hydroxy- and amino-substituted epoxides and oxetanes using the limonene epoxide hydrolase from Rhodococcus erythropolis. This enzyme normally catalyzes hydrolysis with formation of vicinal diols. Firstly, the required shutdown of the undesired natural water-mediated ring-opening is achieved by rational mutagenesis of the active site. In silico enzyme design is then continued with generation of the improved mutants. These variants prove to be versatile catalysts for preparing chiral N- and O-heterocycles with up to 99% conversion, and enantiomeric ratios up to 99:1. Crystal structural data and computational modeling reveal that Baldwin-type cyclizations, catalyzed by the reprogrammed enzyme, are enabled by reshaping the active-site environment that directs the distal RHN and HO-substituents to be intramolecular nucleophiles.
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Affiliation(s)
- Jun-Kuan Li
- grid.33763.320000 0004 1761 2484Department of Chemistry, Frontiers Science Center for Synthetic Biology (Ministry of Education), Tianjin University, Tianjin, 300072 China ,grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China
| | - Ge Qu
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
| | - Xu Li
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
| | - Yuchen Tian
- grid.33763.320000 0004 1761 2484Department of Chemistry, Frontiers Science Center for Synthetic Biology (Ministry of Education), Tianjin University, Tianjin, 300072 China
| | - Chengsen Cui
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
| | - Fa-Guang Zhang
- grid.33763.320000 0004 1761 2484Department of Chemistry, Frontiers Science Center for Synthetic Biology (Ministry of Education), Tianjin University, Tianjin, 300072 China
| | - Wuyuan Zhang
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
| | - Jun-An Ma
- grid.33763.320000 0004 1761 2484Department of Chemistry, Frontiers Science Center for Synthetic Biology (Ministry of Education), Tianjin University, Tianjin, 300072 China
| | - Manfred T. Reetz
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,grid.419607.d0000 0001 2096 9941Biocatalysis Section, Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Zhoutong Sun
- grid.9227.e0000000119573309Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308 China ,National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
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Nastke A, Gröger H. Biocatalytic Synthesis of Heterocycles. HETEROCYCLES 2022. [DOI: 10.1002/9783527832002.ch6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Busch H, Hagedoorn PL, Hanefeld U. Rhodococcus as A Versatile Biocatalyst in Organic Synthesis. Int J Mol Sci 2019; 20:E4787. [PMID: 31561555 PMCID: PMC6801914 DOI: 10.3390/ijms20194787] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 09/23/2019] [Accepted: 09/24/2019] [Indexed: 12/11/2022] Open
Abstract
The application of purified enzymes as well as whole-cell biocatalysts in synthetic organic chemistry is becoming more and more popular, and both academia and industry are keen on finding and developing novel enzymes capable of performing otherwise impossible or challenging reactions. The diverse genus Rhodococcus offers a multitude of promising enzymes, which therefore makes it one of the key bacterial hosts in many areas of research. This review focused on the broad utilization potential of the genus Rhodococcus in organic chemistry, thereby particularly highlighting the specific enzyme classes exploited and the reactions they catalyze. Additionally, close attention was paid to the substrate scope that each enzyme class covers. Overall, a comprehensive overview of the applicability of the genus Rhodococcus is provided, which puts this versatile microorganism in the spotlight of further research.
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Affiliation(s)
- Hanna Busch
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
| | - Peter-Leon Hagedoorn
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
| | - Ulf Hanefeld
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands.
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Schrittwieser JH, Velikogne S, Hall M, Kroutil W. Artificial Biocatalytic Linear Cascades for Preparation of Organic Molecules. Chem Rev 2017; 118:270-348. [DOI: 10.1021/acs.chemrev.7b00033] [Citation(s) in RCA: 371] [Impact Index Per Article: 53.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Joerg H. Schrittwieser
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Stefan Velikogne
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
| | - Mélanie Hall
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Wolfgang Kroutil
- Institute
of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria
- ACIB
GmbH, Department of Chemistry, University of Graz, Heinrichstrasse
28, 8010 Graz, Austria
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de la Torre A, Cuyamendous C, Bultel-Poncé V, Durand T, Galano JM, Oger C. Recent advances in the synthesis of tetrahydrofurans and applications in total synthesis. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.06.076] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Ferrandi EE, Marchesi C, Annovazzi C, Riva S, Monti D, Wohlgemuth R. Efficient Epoxide Hydrolase Catalyzed Resolutions of (+)- and (−)-cis/trans-Limonene Oxides. ChemCatChem 2015. [DOI: 10.1002/cctc.201500608] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Erica Elisa Ferrandi
- Istituto di Chimica del Riconoscimento Molecolare-CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Carlotta Marchesi
- Istituto di Chimica del Riconoscimento Molecolare-CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Celeste Annovazzi
- Istituto di Chimica del Riconoscimento Molecolare-CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Sergio Riva
- Istituto di Chimica del Riconoscimento Molecolare-CNR; Via Mario Bianco 9 20131 Milano Italy
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare-CNR; Via Mario Bianco 9 20131 Milano Italy
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Paul CE, Rajagopalan A, Lavandera I, Gotor-Fernández V, Kroutil W, Gotor V. Expanding the regioselective enzymatic repertoire: oxidative mono-cleavage of dialkenes catalyzed by Trametes hirsuta. Chem Commun (Camb) 2012; 48:3303-5. [PMID: 22358469 DOI: 10.1039/c2cc17572j] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The first report of a biocatalytic regioselective oxidative mono-cleavage of dialkenes was successfully achieved employing a cell-free enzyme preparation from Trametes hirsuta at the expense of molecular oxygen. Selected reactions were performed on a preparative scale affording high to excellent conversions and chemoselectivities.
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Affiliation(s)
- Caroline E Paul
- Department of Organic and Inorganic Chemistry, University of Oviedo, Instituto de Biotecnología de Asturias, Calle Julián Clavería 8, 33006 Oviedo, Spain
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Ueberbacher BT, Hall M, Faber K. Electrophilic and nucleophilic enzymatic cascade reactions in biosynthesis. Nat Prod Rep 2012; 29:337-50. [DOI: 10.1039/c2np00078d] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Remarkable synergistic effect between MonBI and MonBII on epoxide opening reaction in ionophore polyether monensin biosynthesis. Tetrahedron Lett 2011. [DOI: 10.1016/j.tetlet.2011.07.145] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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García-Urdiales E, Alfonso I, Gotor V. Update 1 of: Enantioselective Enzymatic Desymmetrizations in Organic Synthesis. Chem Rev 2011; 111:PR110-80. [DOI: 10.1021/cr100330u] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Eduardo García-Urdiales
- Departamento de Química
Orgánica e Inorgánica, Facultad de Química, Universidad
de Oviedo, Julián Clavería, 8, 33006 Oviedo, Spain,
and
| | - Ignacio Alfonso
- Departamento de Química Biológica
y Modelización Molecular, Instituto de Química Avanzada
de Cataluña (IQAC, CSIC), Jordi Girona, 18-26, 08034, Barcelona,
Spain
| | - Vicente Gotor
- Departamento de Química
Orgánica e Inorgánica, Facultad de Química, Universidad
de Oviedo, Julián Clavería, 8, 33006 Oviedo, Spain,
and
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Nesbitt CL, McErlean CSP. Total synthesis of C19 lipid diols containing a 2,5-disubstituted-3-oxygenated tetrahydrofuran. Org Biomol Chem 2011; 9:2198-208. [DOI: 10.1039/c0ob00754d] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Widersten M, Gurell A, Lindberg D. Structure–function relationships of epoxide hydrolases and their potential use in biocatalysis. Biochim Biophys Acta Gen Subj 2010; 1800:316-26. [DOI: 10.1016/j.bbagen.2009.11.014] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2009] [Revised: 11/09/2009] [Accepted: 11/23/2009] [Indexed: 10/20/2022]
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