Catecholase Activity of a Copper(II) Complex with a Macrocyclic Ligand: Unraveling Catalytic Mechanisms

Enzymatic Substrate Inhibition in Metal Free Catecholase Activity

The catecholase activities were routinely modeled using transition metal complexes as catalyst and in some case basic pH were used as a reaction condition. In this article, the catalytic aerobic oxidation of proxy substrate 3,5-di-tert-butylcatechol (DTBC) in methanol using triethylamine/diethylamine as catalyst was demonstrated as a functional mimic of catecholase activity. The kinetic manifestation of DTBC oxidation was explained as enzymatic substrate inhibition pattern in Michaelis-Menten kinetic model. The mechanistic insight of the aerobic oxidation of DTBC was further validated using various spectroscopic techniques and DFT methods.

A De Novo-Designed Type 3 Copper Protein Tunes Catechol Substrate Recognition and Reactivity

De novo metalloprotein design is a remarkable approach to shape protein scaffolds toward specific functions. Here, we report the design and characterization of Due Rame 1 (DR1), a de novo designed protein housing a di-copper site and mimicking the Type 3 (T3) copper-containing polyphenol oxidases (PPOs). To achieve this goal, we hierarchically designed the first and the second di-metal coordination spheres to engineer the di-copper site into a simple four-helix bundle scaffold. Spectroscopic, thermodynamic, and functional characterization revealed that DR1 recapitulates the T3 copper site, supporting different copper redox states, and being active in the O₂ -dependent oxidation of catechols to o-quinones. Careful design of the residues lining the substrate access site endows DR1 with substrate recognition, as revealed by Hammet analysis and computational studies on substituted catechols. This study represents a premier example in the construction of a functional T3 copper site into a designed four-helix bundle protein.

Synthesis and crystal structures of two tri- and tetra-heterometallic Ni(ii)–Mn(ii)/Ni(ii)–Co(iii) complexes from two different Ni(ii)-containing metalloligands: effective catalytic oxidase activity and Schottky device approach

The development of tri- and tetra-nuclear heterometallic Ni(ii)–Mn(ii)/Ni(ii)–Co(iii) complexes with effective catalytic oxidase activity and the Schottky device approach.

Effect of structural variation on enzymatic activity in tetranuclear (Cu4) clusters with defective cubane core

The stimulus to the modeling of enzyme functioning sites comes from their potential to give insight into the natural enzyme's mechanistic pathways, ascertain the role of that different metal ion in the active site and construct better catalysts motivated by nature. The presence of metal ion leads to the activation of molecular oxygen in the metalloenzymes. The metalloenzymes such as the catechol oxidase (CO) enzyme that oxidizes the catechol to corresponding quinones which eventually protect damage tissues from plant and pathogen. Thus, the design and characterization of catalysts used as selectively and efficiently oxidation reactions have grown to be unique challenges for modern inorganic chemists. In this work, two novel tetranuclear complexes (1 and 2) have been synthesized in excellent yield. The complexes were characterized using various spectroscopic techniques such as FTIR, UV-Visible and PXRD pattern. The structure of 1 and 2 was elucidated by SC-XRD (single crystal X-ray diffraction) analysis. The magnetic study reveals the presence of the antiferromagnetic nature of 1 and 2. Both 1 and 2 shows a very good catecholase-like activity by oxidizing the catechol to analogous quinone in methanolic solution. Thus, a structure-activity relationship can further help us design other substituted tetranuclear complexes with enhanced catecholase like activity.Communicated by Ramaswamy H. Sarma.

Structure, DFT studies and evaluation of catechol oxidase (CO) mimic activity of mononuclear Co(II) complexes derived from aminoalcohols: an experimental and theoretical approach

The impetus to modeling of enzyme mimics comes from their potential to provide insight to the alternate mechanistic pathways of the native enzymes. The present study demonstrates the syntheses and characterization of two different cobalt(II) complexes, [Co(pdm)(Phen)Cl]Cl·H₂O (1) and [Co(pmmH)₂(SCN)₂] (2) with the aminoalcohol ligands such as pyridine-2,6-dimethanol (pdmH₂) or 2-pyridinemonomethanol (pmmH) and their assessment as catechol oxidase (CO) enzyme mimic. Single Crystal X-ray diffraction and powder X-ray diffraction data suggest the octahedral environment around the Co(II) ion and the complexes form extensive 1D or 2D propagating network as a result of non-covalent interactions (O···H and C-H···π). TD-DFT calculations were used to explain the spectral bands obtained during the UV-Vis absorption studies and it is ascertained that the transitions were mainly of the intra-ligand charge transfer (ILCT) type. The catecholase biomimetic catalytic activity of the synthesized complexes has been investigated in detail and the kinetics is also performed. The results obtained show that both the complexes catalyze the aerobic oxidation of catechol to the corresponding o-quinone. The K_cat value for 1 is 106.99 h^‒1 and for 2 is 90.32 h^‒1 in methanol. It may be mentioned here that 1 and 2 are effective catalysts, with the order of activity being 1 > 2. The order of enzymatic activity is well justified by CV and DFT studies.Communicated by Ramaswamy H. Sarma.

Copper(II) complexes of tripodal ligand scaffold (N3O) as functional models for phenoxazinone synthase

The copper(II) complexes [Cu(L)NO₃] (1-9) of newer N₃O ligands (L1-L9) have been synthesized and characterized. The molecular structure of 1, 4, and 7 exhibited nearly a perfect square pyramidal geometry (τ, 0.04-0.11). The Cu-O_Phenolate bonds (~ 1.91 Å) are shorter than the Cu-N bonds (~ 2.06 Å) due to the stronger coordination of anionic phenolate oxygen. The Cu(II)/Cu(I) redox potentials of 1-9 appeared around -0.102 to -0.428 V versus Ag/Ag⁺ in water. The electronic spectra of the complexes showed the d-d transitions around 643-735 nm and axial EPR parameter (g_||, 2.243-2.270; A_||, 164-179 × 10^-4 cm^-1) that corresponds to square pyramidal geometry. The bonding parameters α², 0.760-0.825; β², 0.761-0.994; γ², 0.504-0.856 and K_||, 0.698-0.954 and K_⊥, 0.383-0.820 calculated from EPR spectra and energies of d-d transitions. The complexes catalyzed the conversion of substrate 2-aminophenol into 2-aminophenoxazine-3-one using molecular oxygen in the water and exhibited the yields of 41-61%. The formation of the product is accomplished by the appearance of a new absorption band at 430 nm and the rates of formation were calculated as 6.98-15.65 × 10^-3 s^-1 in water. The reaction follows Michaelis-Menten enzymatic reaction kinetics with turnover numbers (k_cat) 9.11 × 10⁵ h^-1 for 1 and 4.66 × 10⁵ h^-1 for 9 in water. The spectral, redox and kinetic studies were performed in water to mimic the enzymatic oxidation reaction conditions.

Joining of Trinuclear Heterometallic CuII2-MII (M = Mn, Cd) Nodes by Nicotinate to Form 1D Chains: Magnetic Properties and Catalytic Activities

In the present work, four new heterometallic coordination complexes, {[(CuL)₂Mn(nic)(H₂O)₂](ClO₄)(0.5H₂O)}_n (1), {[(CuL)₂Cd(nic)(H₂O)₂](ClO₄)(H₂O)}_n (2), [(CuL)₂Mn(nic)₂]·2CH₃OH (3), and [(CuL)₂Cd(nic)₂]·2CH₃OH (4) (where H₂L = N,N'-bis(α-methylsalicylidene)-1,3-propanediamine and nic = nicotinate ion), have been synthesized and characterized by single-crystal X-ray crystallography. In complexes 1 and 2, the nicotinate ion acts as a bifunctional linker (N,O donor) and joins the linear trinuclear nodes to form 1D polymeric chains. However, in complexes 3 and 4, the nicotinate ion uses only the oxygen atoms of the carboxylic acid (O donor) to bind to the metal centers, forming discrete linear trinuclear units, while the pyridyl nitrogen (N donor atom) remains free. The dc magnetic susceptibility measurements show that the Cu^II and Mn^II ions are antiferromagnetically coupled in both 1 and 3, with exchange coupling constants (J_Mn-Cu) of -20.57 ± 0.08 and -9.38 ± 0.08 cm^-1, respectively. Among the four complexes, 1 and 3 show catechol oxidase and phenoxazinone synthase like catalytic activities. The turnover numbers (k_cat) of complexes 1 and 3 for catecholase activity are 1121 and 720 h^-1, respectively, at an optimum pH of 8.0 and for phenoxazinone synthase activity are 429 and 398 h^-1, respectively, at an optimum pH of 9.7. The higher k_cat values of 1 for both reactions are attributable to a water molecule coordinated to the central Mn^II atom that facilitates the substrate-catalyst binding. An ESI-mass spectral analysis indicates that trinuclear heterometallic species, e.g., [(CuL)₂Mn(nic)(H₂O)]⁺ for 1 and [(CuL)₂Mn(nic)]⁺ for 3, are the active species that bind to the substrate, and on that basis, probable mechanisms through the formation of radical intermediates have been proposed.

Roles of basicity and steric crowding of anionic coligands in catechol oxidase-like activity of Cu(ii)-Mn(ii) complexes

Five new heterometallic Cu(ii)-Mn(ii) discrete trinuclear complexes, [(CuL)2Mn(CH3COO)2] (1), [(CuL)2Mn(NO3)2] (2), [(CuL)2Mn(C6H5COO)(H2O)]Cl (3), [(CuL)2Mn((p-OH)C6H5COO)(H2O)]ClO4 (4) and [(CuL)2Mn(HCOO)(H2O)]ClO4 (5), have been synthesized using a metalloligand, CuL derived from an N2O2 donor Schiff base, H2L (N,N'-bis(α-methylsalicylidene)-1,3-propanediamine). Single-crystal structural analyses reveal that all five complexes have a common [(CuL)2Mn] core, where two terminal metalloligands, CuL, are connected to the central metal ion, Mn(ii), via double phenoxido bridges. Among the complexes, 1 and 2 possess linear structures where the terminal Cu(ii) atoms are bridged to the central Mn(ii) atoms by acetate and nitrate ions, respectively along with the double phenoxido bridges, whereas 3, 4 and 5 have bent structures in which the respective anionic coligands, benzoate, p-hydroxybenzoate and formate ions are coordinated only to central Mn(ii) in monodentate fashion along with a water molecule that completes its hexa-coordinated geometry. Among the complexes, 1, 3, 4 and 5 show quite high bio-mimicking catecholase-like activity for the aerial oxidation of 3,5-di-tert-butylcatechol with turnover numbers (Kcat) of 139 h-1, 439 h-1, 348 h-1 and 730 h-1, respectively, whereas complex 2 is practically inactive towards this reaction. The presence of the coordinated water molecule to Mn(ii) in the bent complexes, 3-5, appears to be responsible for their high catalytic activity and the difference in their activity may be attributed to steric crowding due to the anionic coligand, whereas the inactivity of 2 seems to be associated with the low basicity of the nitrate ion. The temperature-dependent dc molar magnetic susceptibility measurements reveal that complexes 1-5 are antiferromagnetically coupled with the exchange coupling constants (J) = -8.54 cm-1, -11.50 cm-1, -19.83 cm-1, -10.65 cm-1 and -10.27 cm-1 for 1, 2, 3, 4 and 5 respectively as is expected from the Cu-O-Mn bridging angles.

Facile synthesis of a new Cu(ii) complex with an unsymmetrical ligand and its use as an O3 donor metalloligand in the synthesis of Cu(ii)-Mn(ii) complexes: structures, magnetic properties, and catalytic oxidase activities

A new, facile Cu(ii) template method has been employed for the unsymmetrical dicondensation of 1,2-ethylenediamine with salicylaldehyde and o-vanillin. The mononuclear complex, [CuL] (1), thus obtained, has been used as an O₃ donor metalloligand for the synthesis of four new Cu(ii)-Mn(ii) complexes, [(CuL)MnCl₂] (2), [(CuL)Mn(NO₃)₂(CH₃OH)]_n (3), {[(CuL)Mn(benz)(H₂O)]₂·(CuL)₂(ClO₄)₂} (4) and [(CuL)Mn(benz)Cl]₂ (5) (where benz = benzoate). Single-crystal structural analyses reveal that 2 is a dinuclear complex while complex 3 is polymeric with a repeating dinuclear [(CuL)Mn(NO₃)₂(CH₃OH)] unit, linked via the nitrate ion. Both 4 and 5 are discrete tetranuclear complexes, where the dinuclear units [(CuL)Mn(benz)(H₂O)] and [(CuL)Mn(benz)Cl] are connected by double benzoate and double chloride bridges, respectively. In complex 4, two monomeric [CuL] units are cocrystallized with the tetranuclear complex. An important difference in the structure of 4 from the other three complexes is that one solvent water molecule is coordinated to each Mn(ii) ion, which makes complex 4 catalytically very active towards mimicking catecholase and phenoxazinone synthase-like oxidation reactions. The turnover numbers (k_cat) for the aerial oxidation of 3,5-di-tert-butylcatechol and o-aminophenol are 399 h^-1 and 230 h^-1, respectively. The evidence of the intermediate species in the mass spectra indicates possible heterometallic cooperation where the Mn(ii) center helps in substrate binding and Cu(ii) participates in the oxidation reactions with molecular oxygen. Cyclic voltammetry measurements suggest the reduction of Cu(ii) to Cu(i) during the catalytic process. Temperature-dependent dc molar magnetic susceptibility measurements reveal that complexes 2-5 are antiferromagnetically coupled with the exchange coupling constants (J) of J = -13.5 cm^-1 and J = -13.5 cm^-1 for 2 and 3, respectively, J₁ = -12.6 cm^-1 and J₂ = -1.20 cm^-1 for complex 4 and J₁ = -13.24 cm^-1 and J₂ = 0.36 cm^-1 for complex 5 as is expected from the Cu-O-Mn bridging angles.

Entrapment of a Pseudo-Tetrahedral CoII Center by Thioether Sulfur Bound {Co2 (μ-L)} Fragments: Synthesis, Field-Induced Single-Ion Magnetism and Catechol Oxidase Mimicking Activity

Simultaneous incorporation of both Co^II and Co^III ions within a new thioether S-bearing phenol-based ligand system, H₃ L (2,6-bis-[{2-(2-hydroxyethylthio)ethylimino}methyl]-4-methylphenol) formed [Co₅ ] aggregates [Co^II Co^III ₄ L₂ (μ-OH)₂ (μ_1,3 -O₂ CCH₃ )₂ ](ClO₄ )₄ ⋅H₂ O (1) and [Co^II Co^III ₄ L₂ (μ-OH)₂ (μ_1,3 -O₂ CC₂ H₅ )₂ ](ClO₄ )₄ ⋅H₂ O (2). The magnetic studies revealed axial zero-field splitting (ZFS) parameter, D/hc=-23.6 and -24.3 cm^-1 , and E/D=0.03 and 0.00, respectively for 1 and 2. Dynamic magnetic data confirmed the complexes as SIMs with U_eff /k_B =30 K (1) and 33 K (2), and τ₀ =9.1×10^-8  s (1), and 4.3×10^-8  s (2). The larger atomic radius of S compared to N gave rise to less variation in the distortion of tetrahedral geometry around central Co^II centers, thus affecting the D and U_eff /k_B values. Theoretical studies also support the experimental findings and reveal the origin of the anisotropy parameters. In solutions, both 1 and 2 which produce {Co^III ₂ (μ-L)} units, display solvent-dependent catechol oxidation behavior toward 3,5-di-tert-butylcatechol in air. The presence of an adjacent Co^III ion tends to assist the electron transfer from the substrate to the metal ion center, enhancing the catalytic oxidation rate.

Designing antiferromagnetically coupled mono-, di- and tri-bridged copper(ii)-based catecholase models by varying the ‘Auxiliary Parts’ of the ligand and anionic co-ligand

The role of the auxiliary part of ligands towards the architecture of copper(ii)-based catecholase models were unveiled with the help of DFT study.

Thioether sulfur-bound [Cu2] complexes showing catechol oxidase activity and DNA cleaving behaviour

Ligand backbone alteration leads to different mechanisms for catecholase activity and order of interaction with DNA molecules.

Copper-phthalocyanine coordination polymer as a reusable catechol oxidase biomimetic catalyst

We report the synthesis, characterization and catalytic activity of a new phthalocyanine coordination polymer (Cu₄CuPcSPy).

On the copper(ii) binding of asymmetrically functionalized tripodal peptides: solution equilibrium, structure, and enzyme mimicking

The increasing histidyl functionalisation of tren results in the fundamental impact on the structure, stability and catecholase activity of its copper(ii) complexes.

Mixed azido/phenoxido bridged trinuclear Cu(ii) complexes of Mannich bases: Synthesis, structures, magnetic properties and catalytic oxidase activities

Three mixed azido/phenoxido bridged trinuclear Cu(ii) complexes of tetradentate Mannich base ligands, synthesised by a metalloligand approach show antiferromagnetic coupling and significant catecholase and phenoxazinone synthase like activities.

Oxygen Delivery as a Limiting Factor in Modelling Dicopper(II) Oxidase Reactivity

Deprotonation of ligand-appended alkoxyl groups in mononuclear copper(II) complexes of N,O ligands L₁ and L₂ , gave dinuclear complexes sharing symmetrical Cu₂ O₂ cores. Molecular structures of these mono- and binuclear complexes have been characterized by XRD, and their electronic structures by UV/Vis, ¹ H NMR, EPR and DFT; moreover, catalytic performance as models of catechol oxidase was studied. The binuclear complexes with anti-ferromagnetically coupled copper(II) centers are moderately active in quinone formation from 3,5-di-tert-butyl-catechol under the established conditions of oxygen saturation, but are strongly activated when additional dioxygen is administered during catalytic turnover. This unforeseen and unprecedented effect is attributed to increased maximum reaction rates v_max , whereas the substrate affinity K_M remains unaffected. Oxygen administration is capable of (partially) removing limitations to turnover caused by product inhibition. Because product inhibition is generally accepted to be a major limitation of catechol oxidase models, we think that our observations will be applicable more widely.

Tuning the coordination properties of multi-histidine peptides by using a tripodal scaffold: solution chemical study and catechol oxidase mimicking

Histidine-rich tripodal peptides form unique oligonuclear complexes with copper(ii), which exhibit efficient catecholase-like activity.

Syntheses and characterization of monobasic tridentate Cu(ii) Schiff-base complexes for efficient oxidation of 3,5-di-tert-butylcatechol and oxidative bromination of organic substrates

Enhanced bifunctional catalytic activities are shown by monobasic tridentate Cu(ii) Schiff-base complexes.

Nuclearity dependent solvent contribution to the catechol oxidase activity of novel copper(ii) complexes derived from Mannich-base ligand platforms: synthesis, crystal structure and mechanism

Solvent-dependent kinetic studies of the catecholase activity of a set of Cu(ii) complexes reveal alcoholysis and hydrolysis as the governing factors for k_cat extrema.

Control of structure, stability and catechol oxidase activity of copper(ii) complexes by the denticity of tripodal platforms

The speciation and catecholase-like activity of trinuclear complexes can be fine tuned by the denticity of tripodal platforms.

Catecholase activity, DNA binding and cytotoxicity studies of a Cu(ii) complex of a pyridoxal schiff base: synthesis, X-ray crystal structure, spectroscopic, electrochemical and theoretical studies

A Cu(ii) complex, [Cu(L¹H^py)Cl]₂(ClO₄)₂, of a tridentate pyridoxal Schiff base shows exceptionally high catalytic efficiency (k_cat = 3.46 × 10⁵ h⁻¹) for catecholase activity in MeOH solution, the highest value reported in literature so far.

Competitive coordination aggregation for V-shaped [Co3] and disc-like [Co7] complexes: synthesis, magnetic properties and catechol oxidase activity

The synthetic procedures, magnetic properties and catecholase-like activity of a V-shaped [CoII3L₄] and planar disc-like [CoII7L₆] complexes have been discussed.

Catecholase activity of Mannich-based dinuclear CuII complexes with theoretical modeling: new insight into the solvent role in the catalytic cycle

Catecholase activity has been explored by combined experimental and theoretical approaches using di-copper(ii) complexes of Mannich-base ligands.