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Ayachi H, Gazzeh H, Boubaker T, Guillemin JC. Methylenecyanamide (CH 2═NCN) and ( Z)- and ( E)-Iminoacetonitriles (NC-CH═NH), Dimers of Hydrogen Cyanide. J Org Chem 2023; 88:2570-2574. [PMID: 36709430 DOI: 10.1021/acs.joc.2c02493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
(Z)- and (E)-iminoacetonitriles (NCCH═NH), two hydrogen cyanide dimers, are described as key compounds in prebiotic chemistry. Among the many possible dimers of HCN with covalent bonds, even the second on the scale of thermodynamic stability, methylenecyanamide (CH2═NCN), has been investigated little. We show that this compound can be isolated, is stable enough to give an adduct with a nucleophile or a diene, and can be easily generated under prebiotic conditions, highlighting a possible role in this medium. Comparison between isomers shows significant differences in formation and chemical reactivity.
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Affiliation(s)
- Hajer Ayachi
- Ecole Nationale Supérieure de Chimie de Rennes, CNRS, ISCR-UMR 6226, Univ Rennes,, 35000 Rennes, France.,Université de Monastir, Avenue Taher Hadded, B.P. 56, Monastir 5000, Tunisia
| | - Houda Gazzeh
- Ecole Nationale Supérieure de Chimie de Rennes, CNRS, ISCR-UMR 6226, Univ Rennes,, 35000 Rennes, France.,Université de Monastir, Avenue Taher Hadded, B.P. 56, Monastir 5000, Tunisia
| | - Taoufik Boubaker
- Université de Monastir, Avenue Taher Hadded, B.P. 56, Monastir 5000, Tunisia
| | - Jean-Claude Guillemin
- Ecole Nationale Supérieure de Chimie de Rennes, CNRS, ISCR-UMR 6226, Univ Rennes,, 35000 Rennes, France
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2
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Zobeydi R, Nazari P, Rahman Setayesh S. Theoretical study of the thermodynamic parameters of (CaO)n nanoclusters with n = 2–16 in the gas and solution phases: proton affinity, molecular basicity, and pKb values. Struct Chem 2019. [DOI: 10.1007/s11224-019-01318-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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3
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Bouchoux G. Gas phase basicities of polyfunctional molecules. Part 6: Cyanides and isocyanides. MASS SPECTROMETRY REVIEWS 2018; 37:533-564. [PMID: 28621817 DOI: 10.1002/mas.21538] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Accepted: 05/15/2017] [Indexed: 05/26/2023]
Abstract
This paper gathers structural and thermochemical informations related to the gas-phase basicity of molecules containing cyanides (nitriles) and isocyanides (isonitriles) functional groups. It constitutes the sixth part of a general review devoted to gas-phase basicities of polyfunctional compounds. A large corpus of cyanides and isocyanides molecules is examined under seven major chapters. In the first one, a rapid overview of the definitions and methods leading to gas-phase basicity, GB, proton affinity, PA, and protonation entropy, Δp S°, is given. In the same chapter, several aspects of the gas phase chemistry of protonated cyanides and isocyanides are also presented. Chapters II-VI detail the protonation energetics of aliphatic, unsaturated, and heteroatom substituted (halogens, O, S, N, P) cyanides. A seventh chapter is devoted to isocyanides. Experimental data available in the literature (120 references) were reevaluated according to the presently adopted basicity scale that is the NIST database anchored to PA(NH3 ) = 853.6 kJ/mol and GB (NH3 ) = 819 kJ/mol. In this latter source, however, several erroneous values have been identified which were corrected in the present review. Structural and energetic information given by G4MP2 quantum chemistry computations on ca. 60 typical systems are presented. The present review includes the GB, PA, and Δp S° values of ca. 110 cyanides and isocyanides, and, for selected examples, is completed by a set of computed heats of formation (Δf H°) at 0 and 298 K.
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Affiliation(s)
- Guy Bouchoux
- Département de Chimie, Laboratoire de Chimie Moléculaire, UMR CNRS 9168, Ecole Polytechnique, Palaiseau, France
- Université Paris-Sud XI, ICMO, Orsay, France
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4
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Theoretical studies of the influence of protic and aprotic ionic liquids on the basicity of CaO as a solid base catalyst. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.02.019] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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5
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Raczyńska ED, Gal JF, Maria PC. Enhanced Basicity of Push-Pull Nitrogen Bases in the Gas Phase. Chem Rev 2016; 116:13454-13511. [PMID: 27739663 DOI: 10.1021/acs.chemrev.6b00224] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Nitrogen bases containing one or more pushing amino-group(s) directly linked to a pulling cyano, imino, or phosphoimino group, as well as those in which the pushing and pulling moieties are separated by a conjugated spacer (C═X)n, where X is CH or N, display an exceptionally strong basicity. The n-π conjugation between the pushing and pulling groups in such systems lowers the basicity of the pushing amino-group(s) and increases the basicity of the pulling cyano, imino, or phosphoimino group. In the gas phase, most of the so-called push-pull nitrogen bases exhibit a very high basicity. This paper presents an analysis of the exceptional gas-phase basicity, mostly in terms of experimental data, in relation with structure and conjugation of various subfamilies of push-pull nitrogen bases: nitriles, azoles, azines, amidines, guanidines, vinamidines, biguanides, and phosphazenes. The strong basicity of biomolecules containing a push-pull nitrogen substructure, such as bioamines, amino acids, and peptides containing push-pull side chains, nucleobases, and their nucleosides and nucleotides, is also analyzed. Progress and perspectives of experimental determinations of GBs and PAs of highly basic compounds, termed as "superbases", are presented and benchmarked on the basis of theoretical calculations on existing or hypothetical molecules.
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Affiliation(s)
- Ewa D Raczyńska
- Department of Chemistry, Warsaw University of Life Sciences (SGGW) , ul. Nowoursynowska 159c, 02-776 Warszawa, Poland
| | - Jean-François Gal
- Institut de Chimie de Nice (ICN) - UMR CNRS 7272, University Nice Sophia Antipolis , Parc Valrose, 06108 Nice Cedex 2, France
| | - Pierre-Charles Maria
- Institut de Chimie de Nice (ICN) - UMR CNRS 7272, University Nice Sophia Antipolis , Parc Valrose, 06108 Nice Cedex 2, France
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6
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Luzhkov VB, Kotelnikov AI. Quantum calculations of acidity constants of hydro[60]fullerenes in DMSO. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.09.049] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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7
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Raczyńska ED, Makowski M, Maria PC, Gal JF. Can Nitriles Be Stronger Bases Than Proton Sponges in the Gas Phase? A Computational Analysis. J Phys Chem A 2015; 119:8225-36. [DOI: 10.1021/acs.jpca.5b04617] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ewa D. Raczyńska
- Department
of Chemistry, Warsaw University of Life Sciences (SGGW), ul.
Nowoursynowska 159c, 02-776 Warszawa, Poland
| | - Mariusz Makowski
- Faculty
of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
| | - Pierre-Charles Maria
- Institut
de Chimie de Nice (ICN) − UMR CNRS 7272, University Nice Sophia Antipolis, Parc Valrose, 06108 Nice Cedex 2, France
| | - Jean-François Gal
- Institut
de Chimie de Nice (ICN) − UMR CNRS 7272, University Nice Sophia Antipolis, Parc Valrose, 06108 Nice Cedex 2, France
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Wang YC, Xie YY, Tan XC, Wang HS, Pan YM. Sc(OTf)3-mediated 1,3-dipolar cycloaddition-ring cleavage-rearrangement: a highly stereoselective access to Z-β-enaminonitriles. Org Biomol Chem 2015; 13:513-9. [PMID: 25375635 DOI: 10.1039/c4ob01801j] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel and highly stereoselective synthesis of Z-β-enaminonitriles from azides and α,β-unsaturated nitriles is reported. The reaction proceeds via a 1,3-dipolar cycloaddition-ring cleavage-rearrangement cascade mediated by a catalytic amount of Sc(OTf)3. A plausible reaction mechanism for this process is depicted.
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Affiliation(s)
- Ying-chun Wang
- Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources (Ministry of Education of China), School of Chemistry & Chemical Engineering of Guangxi Normal University, Guilin 541004, People's Republic of China.
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Raczyńska ED, Gal JF, Maria PC. Exceptional proton affinities of push–pull nitriles substituted by the guanidino and phosphazeno groups. RSC Adv 2015. [DOI: 10.1039/c5ra02716k] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The G2(MP2)-calculated PA(N-cyano) for (H2N)2CN–CN and (H2N)3PN–CN are larger than that of HCN by 186 and 250 kJ mol−1, respectively.
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Affiliation(s)
- Ewa D. Raczyńska
- Department of Chemistry
- Warsaw University of Life Sciences (SGGW)
- 02-776 Warszawa
- Poland
| | - Jean-François Gal
- Institut de Chimie de Nice (ICN) – UMR CNRS 7272
- University Nice Sophia Antipolis
- 06108 Nice Cedex 2
- France
| | - Pierre-Charles Maria
- Institut de Chimie de Nice (ICN) – UMR CNRS 7272
- University Nice Sophia Antipolis
- 06108 Nice Cedex 2
- France
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10
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Proton affinity and molecular basicity of m - and p -substituted benzamides in gas phase and in solution: A theoretical study. Chem Phys Lett 2014. [DOI: 10.1016/j.cplett.2014.07.050] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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11
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Hurtado M, Yánez M, Herrero R, Guerrero A, Dávalos JZ, Abboud JLM, Khater B, Guillemin JC. The ever-surprising chemistry of boron: enhanced acidity of phosphine.boranes. Chemistry 2009; 15:4622-9. [PMID: 19274692 DOI: 10.1002/chem.200802307] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The acidity-enhancing effect of BH(3) in gas-phase phosphineboranes compared to the corresponding free phosphines is enormous, between 13 and 18 orders of magnitude in terms of ionization constants. Thus, the enhancement of the acidity of protic acids by Lewis acids usually observed in solution is also observed in the gas phase. For example, the gas-phase acidities (GA) of MePH(2) and MePH(2)BH(3) differ by about 118 kJ mol(-1) (see picture).The gas-phase acidity of a series of phosphines and their corresponding phosphineborane derivatives was measured by FT-ICR techniques. BH(3) attachment leads to a substantial increase of the intrinsic acidity of the system (from 80 to 110 kJ mol(-1)). This acidity-enhancing effect of BH(3) is enormous, between 13 and 18 orders of magnitude in terms of ionization constants. This indicates that the enhancement of the acidity of protic acids by Lewis acids usually observed in solution also occurs in the gas phase. High-level DFT calculations reveal that this acidity enhancement is essentially due to stronger stabilization of the anion with respect to the neutral species on BH(3) association, due to a stronger electron donor ability of P in the anion and better dispersion of the negative charge in the system when the BH(3) group is present. Our study also shows that deprotonation of ClCH(2)PH(2) and ClCH(2)PH(2)BH(3) is followed by chloride departure. For the latter compound deprotonation at the BH(3) group is found to be more favorable than PH(2) deprotonation, and the subsequent loss of Cl(-) is kinetically favored with respect to loss of Cl(-) in a typical S(N)2 process. Hence, ClCH(2)PH(2)BH(3) is the only phosphineborane adduct included in this study which behaves as a boron acid rather than as a phosphorus acid.
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Affiliation(s)
- Marcela Hurtado
- Departamento de Química, C-9, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
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Chrostowska A, Nguyen TXM, Dargelos A, Khayar S, Graciaa A, Guillemin JC. β-Heterosubstituted Acrylonitriles − Electronic Structure Study by UV-Photoelectron Spectroscopy and Quantum Chemical Calculations. J Phys Chem A 2009; 113:2387-96. [DOI: 10.1021/jp8087447] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Anna Chrostowska
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
| | - Thi Xuan Mai Nguyen
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
| | - Alain Dargelos
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
| | - Saïd Khayar
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
| | - Alain Graciaa
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
| | - Jean-Claude Guillemin
- Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour − CNRS − UMR 5254, 64000 Pau, France, Laboratoire des Fluides Complexes, Université de Pau et des Pays de l’Adour − CNRS − UMR 5150, 64000 Pau, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes − CNRS, 35708 Rennes, France
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13
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Lamsabhi AM, Mó O, Yáñez M, Salpin JY, Haldys V, Tortajada J, Guillemin JC. Ni+ Reactions with Aminoacrylonitrile, A Species of Potential Astrochemical Relevance. J Phys Chem A 2008; 112:10509-15. [DOI: 10.1021/jp8051328] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Al Mokhtar Lamsabhi
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Otilia Mó
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Manuel Yáñez
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Jean-Yves Salpin
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Violette Haldys
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Jeanine Tortajada
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
| | - Jean-Claude Guillemin
- Departamento de Química C-9, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain, Université d′Evry Val d′Essonne, Laboratoire d′Analyse et Modélisation pour la Biologie et l′Environnement, CNRS - UMR 8587, Bâtiment Maupertuis, Boulevard François Mitterrand, 91025 Evry, France, and Sciences Chimiques de Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS - 35700, Rennes France
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